Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:24:04 (3299012): wrapper (7.7.26015): starting
08:24:04 (3299012): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 08:24:04] Arguments: --nthreads 4
[2025-07-27 08:24:04] Threads: 4
[2025-07-27 08:24:04] Checking for CVMFS
[2025-07-27 08:24:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 08:24:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 08:24:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 08:24:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 08:24:05] 2.9.2.0 848957 7570 102156 148803 0 57 34586211 36864001 0 130560 0 5688887 99.990 277514 2403 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 08:24:05] CVMFS is ok
[2025-07-27 08:24:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 08:24:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 08:24:05] Further information can be found at the LHC@home message board.
[2025-07-27 08:24:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 08:24:05] Checking for apptainer binary...
[2025-07-27 08:24:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 08:24:05] Running /usr/bin/apptainer --version
[2025-07-27 08:24:05] apptainer version 1.3.6-6.1
[2025-07-27 08:24:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 08:24:05] thA375
[2025-07-27 08:24:05] apptainer works
[2025-07-27 08:24:05] Set ATHENA_PROC_NUMBER=4
[2025-07-27 08:24:05] Set ATHENA_CORE_NUMBER=4
[2025-07-27 08:24:05] Starting ATLAS job with PandaID=6745228214
[2025-07-27 08:24:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:45:59]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:45:59]  is_tar=False
[2025-07-27 09:45:59]  lfn=log.45743349._038668.job.log.tgz.1
[2025-07-27 09:45:59]  mtime=0
[2025-07-27 09:45:59]  protocol_id=None
[2025-07-27 09:45:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 09:45:59]  replicas=None
[2025-07-27 09:45:59]  scope=mc23_13p6TeV
[2025-07-27 09:45:59]  status=None
[2025-07-27 09:45:59]  status_code=0
[2025-07-27 09:45:59]  storage_token=
[2025-07-27 09:45:59]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745228214/log.45743349._038668.job.log.tgz.1
[2025-07-27 09:45:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/26/log.45743349._038668.job.log.tgz.1
[2025-07-27 09:45:59]  workdir=None
[2025-07-27 09:45:59] ]
[2025-07-27 09:45:59] 2025-07-27 07:45:21,074 | INFO     | transferring file log.45743349._038668.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745228214/log.45743349._038668.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 09:45:59] 2025-07-27 07:45:21,074 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745228214/log.45743349._038668.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0386
[2025-07-27 09:45:59] 2025-07-27 07:45:21,087 | INFO     | PID=3302729 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 09:45:59] 2025-07-27 07:45:21,093 | INFO     | adding to output.list: log.45743349._038668.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/26/log.45743349._038668.job.log.tg
[2025-07-27 09:45:59] 2025-07-27 07:45:21,093 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 09:45:59] 2025-07-27 07:45:21,093 | INFO     | summary of transferred files:
[2025-07-27 09:45:59] 2025-07-27 07:45:21,093 | INFO     |  -- lfn=log.45743349._038668.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 09:45:59] 2025-07-27 07:45:21,093 | INFO     | stage-out finished correctly
[2025-07-27 09:45:59] 2025-07-27 07:45:21,671 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 09:45:59] 2025-07-27 07:45:21,937 | INFO     | monitor loop #374: job 0:6745228214 is in state 'finished'
[2025-07-27 09:45:59] 2025-07-27 07:45:21,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:45:59] 2025-07-27 07:45:24,441 | INFO     | monitor loop #375: job 0:6745228214 is in state 'finished'
[2025-07-27 09:45:59] 2025-07-27 07:45:24,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:45:59] 2025-07-27 07:45:24,464 | INFO     | job 6745228214 has state=finished
[2025-07-27 09:45:59] 2025-07-27 07:45:24,464 | INFO     | preparing for final server update for job 6745228214 in state='finished'
[2025-07-27 09:45:59] 2025-07-27 07:45:24,465 | INFO     | this job has now completed (state=finished)
[2025-07-27 09:45:59] 2025-07-27 07:45:24,465 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 09:45:59] 2025-07-27 07:45:24,465 | INFO     | log transfer has been attempted: DONE
[2025-07-27 09:45:59] 2025-07-27 07:45:24,465 | INFO     | job 6745228214 has finished - writing final server update
[2025-07-27 09:45:59] 2025-07-27 07:45:24,465 | INFO     | total number of processed events: 400 (read)
[2025-07-27 09:45:59] 2025-07-27 07:45:24,466 | INFO     | executing command: lscpu
[2025-07-27 09:45:59] 2025-07-27 07:45:24,486 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 09:45:59] 2025-07-27 07:45:26,944 | INFO     | monitor loop #376: job 0:6745228214 is in state 'finished'
[2025-07-27 09:45:59] 2025-07-27 07:45:26,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:45:59] 2025-07-27 07:45:27,799 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 09:45:59] 2025-07-27 07:45:27,801 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3467.5628749999996
[2025-07-27 09:45:59] 2025-07-27 07:45:27,802 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745228214/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:45:59] 2025-07-27 07:45:27,802 | INFO     | extracted standard info from prmon json
[2025-07-27 09:45:59] 2025-07-27 07:45:27,802 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 09:45:59] 2025-07-27 07:45:27,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:45:59] 2025-07-27 07:45:27,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:45:59] 2025-07-27 07:45:27,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | sum of deviations: -14819596932.0
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | mean x: 1753599975.0
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | mean y: 2647648.5342465756
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | -- intersect: 215479896557.35504
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | intersect: 215479896557.35504
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | chi2: 0.1389503599750692
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | -- intersect: 215479896557.35504
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | current memory leak: -122.88 B/s (using 73 data points, chi2=0.14)
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | could have reported an average CPU frequency of 3626 MHz (6 samples)
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | ..............................
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | . Timing measurements:
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | . get job = 0 s
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | . initial setup = 1 s
[2025-07-27 09:45:59] 2025-07-27 07:45:27,804 | INFO     | . payload setup = 4 s
[2025-07-27 09:45:59] 2025-07-27 07:45:27,805 | INFO     | . stage-in = 0 s
[2025-07-27 09:45:59] 2025-07-27 07:45:27,805 | INFO     | . payload execution = 4846 s
[2025-07-27 09:45:59] 2025-07-27 07:45:27,805 | INFO     | . stage-out = 0 s
[2025-07-27 09:45:59] 2025-07-27 07:45:27,805 | INFO     | . log creation = 0 s
[2025-07-27 09:45:59] 2025-07-27 07:45:27,805 | INFO     | ..............................
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | 
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | job summary report
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | --------------------------------------------------
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | PanDA job id: 6745228214
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | task id: 45743349
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | errors: (none)
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | pilot state: finished 
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | transexitcode: 0
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | exeerrorcode: 0
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | exeerrordiag: 
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | exitcode: 0
[2025-07-27 09:45:59] 2025-07-27 07:45:27,914 | INFO     | exitmsg: OK
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | cpuconsumptiontime: 18497 s
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | nevents: 400
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | neventsw: 0
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | pid: 3309347
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | pgrp: 3309347
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | corecount: 4
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | event service: False
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | sizes: {0: 2397307, 1: 2397506, 4: 2397768, 11: 2397796, 4854: 2424181, 4855: 2433185, 4856: 2433369, 4862: 2433563}
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | --------------------------------------------------
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | 
[2025-07-27 09:45:59] 2025-07-27 07:45:27,915 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 09:45:59] 2025-07-27 07:45:27,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | job 6745228214 has completed (purged errors)
[2025-07-27 09:45:59] 2025-07-27 07:45:27,934 | INFO     | overall cleanup function is called
[2025-07-27 09:45:59] 2025-07-27 07:45:28,941 | INFO     | --- collectZombieJob: --- 10, [3309347]
[2025-07-27 09:45:59] 2025-07-27 07:45:28,941 | INFO     | zombie collector waiting for pid 3309347
[2025-07-27 09:45:59] 2025-07-27 07:45:28,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:45:59] 2025-07-27 07:45:28,941 | INFO     | collected zombie processes
[2025-07-27 09:45:59] 2025-07-27 07:45:28,941 | INFO     | will attempt to kill all subprocesses of pid=3309347
[2025-07-27 09:45:59] 2025-07-27 07:45:28,998 | INFO     | process IDs to be killed: [3309347] (in reverse order)
[2025-07-27 09:45:59] 2025-07-27 07:45:29,034 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:45:59] 2025-07-27 07:45:29,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:45:59] 2025-07-27 07:45:29,036 | INFO     | did not find any defunct processes belonging to 3309347
[2025-07-27 09:45:59] 2025-07-27 07:45:29,038 | INFO     | did not find any defunct processes belonging to 3309347
[2025-07-27 09:45:59] 2025-07-27 07:45:29,038 | INFO     | ready for new job
[2025-07-27 09:45:59] 2025-07-27 07:45:29,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:45:59] 2025-07-27 07:45:29,039 | INFO     | ***************************************
[2025-07-27 09:45:59] 2025-07-27 07:45:29,039 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:45:59] 2025-07-27 07:45:29,039 | INFO     | ***************************************
[2025-07-27 09:45:59] 2025-07-27 07:45:29,039 | INFO     | 
[2025-07-27 09:45:59] 2025-07-27 07:45:29,040 | INFO     | architecture information:
[2025-07-27 09:45:59] 2025-07-27 07:45:29,040 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:45:59] 2025-07-27 07:45:29,053 | INFO     | cat /etc/os-release:
[2025-07-27 09:45:59] NAME="CentOS Linux"
[2025-07-27 09:45:59] VERSION="7 (Core)"
[2025-07-27 09:45:59] ID="centos"
[2025-07-27 09:45:59] ID_LIKE="rhel fedora"
[2025-07-27 09:45:59] VERSION_ID="7"
[2025-07-27 09:45:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:45:59] ANSI_COLOR="0;31"
[2025-07-27 09:45:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:45:59] HOME_URL="https://www.centos.org/"
[2025-07-27 09:45:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:45:59] 
[2025-07-27 09:45:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:45:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:45:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:45:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:45:59] 
[2025-07-27 09:45:59] 2025-07-27 07:45:29,053 | INFO     | ***************************************
[2025-07-27 09:45:59] 2025-07-27 07:45:29,556 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 09:45:59] 2025-07-27 07:45:29,572 | INFO     | sufficient remaining disk space (220491415552 B)
[2025-07-27 09:45:59] 2025-07-27 07:45:29,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:45:59] 2025-07-27 07:45:29,572 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:45:59] 2025-07-27 07:45:29,572 | INFO     | update_server=False
[2025-07-27 09:45:59] 2025-07-27 07:45:29,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:45:59] 2025-07-27 07:45:29,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:45:59] 2025-07-27 07:45:29,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:45:59] 2025-07-27 07:45:29,762 | INFO     | all job control threads have been joined
[2025-07-27 09:45:59] 2025-07-27 07:45:29,815 | INFO     | all data control threads have been joined
[2025-07-27 09:45:59] 2025-07-27 07:45:30,040 | INFO     | all payload control threads have been joined
[2025-07-27 09:45:59] 2025-07-27 07:45:30,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:45:59] 2025-07-27 07:45:30,453 | INFO     | aborting loop
[2025-07-27 09:45:59] 2025-07-27 07:45:30,578 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:30,578 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:30,611 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:30,637 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:30,655 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:30,767 | INFO     | [job] control thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:30,820 | INFO     | [data] control thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:31,046 | INFO     | [payload] control thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:31,166 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:31,457 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:31,575 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:31,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:31,856 | INFO     | [job] validate thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:31,908 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:31,933 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:32,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:45:59] 2025-07-27 07:45:36,227 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:45:59] 2025-07-27 07:45:37,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813031737152)>', '<ExcThread(monitor, started 139812300375808)>']
[2025-07-27 09:45:59] 2025-07-27 07:45:42,179 | INFO     | all workflow threads have been joined
[2025-07-27 09:45:59] 2025-07-27 07:45:42,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:45:59] 2025-07-27 07:45:42,180 | INFO     | traces error code: 0
[2025-07-27 09:45:59] 2025-07-27 07:45:42,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:45:59] 2025-07-27 07:45:59,229 | INFO     | PID=3302729 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 09:45:59] 2025-07-27 07:45:59,229 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:45:59] 2025-07-27 07:45:59,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:45:59] 2025-07-27 07:45:59,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:45:59] 2025-07-27 07:45:59,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:45:59] 2025-07-27 07:45:59,230 | INFO     | [monitor] control thread has ended
[2025-07-27 09:45:59] 2025-07-27 07:45:59,297 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:45:59] 2025-07-27 07:45:59,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:45:59] 2025-07-27 07:45:59,305 [wrapper] pilotpid: 3302729
[2025-07-27 09:45:59] 2025-07-27 07:45:59,309 [wrapper] Pilot exit status: 0
[2025-07-27 09:45:59] 2025-07-27 07:45:59,319 [wrapper] pandaids: 6745228214
[2025-07-27 09:45:59] 2025-07-27 07:45:59,343 [wrapper] cleanup supervisor_pilot 3324283 3302730
[2025-07-27 09:45:59] 2025-07-27 07:45:59,347 [wrapper] Test setup, not cleaning
[2025-07-27 09:45:59] 2025-07-27 07:45:59,350 [wrapper] apfmon messages muted
[2025-07-27 09:45:59] 2025-07-27 07:45:59,354 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:45:59] 2025-07-27 07:45:59,357 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:45:59]  *** Error codes and diagnostics ***
[2025-07-27 09:45:59]     "exeErrorCode": 0,
[2025-07-27 09:45:59]     "exeErrorDiag": "",
[2025-07-27 09:45:59]     "pilotErrorCode": 0,
[2025-07-27 09:45:59]     "pilotErrorDiag": "",
[2025-07-27 09:45:59]  *** Listing of results directory ***
[2025-07-27 09:45:59] total 435692
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc    530466 Jul 26 15:41 pilot3.tar.gz
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc      5112 Jul 26 15:43 queuedata.json
[2025-07-27 09:45:59] -rwx------ 1 boinc boinc     36292 Jul 26 15:44 runpilot2-wrapper.sh
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc       100 Jul 27 08:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:45:59] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 08:24 run_atlas
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc       105 Jul 27 08:24 job.xml
[2025-07-27 09:45:59] -rw-r--r-- 2 boinc boinc 228514339 Jul 27 08:24 EVNT.45743347._002209.pool.root.1
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc      6853 Jul 27 08:24 init_data.xml
[2025-07-27 09:45:59] drwxrwx--x 2 boinc boinc      4096 Jul 27 08:24 shared
[2025-07-27 09:45:59] -rw-r--r-- 2 boinc boinc    542893 Jul 27 08:24 input.tar.gz
[2025-07-27 09:45:59] -rw-r--r-- 2 boinc boinc     15095 Jul 27 08:24 start_atlas.sh
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc         0 Jul 27 08:24 boinc_lockfile
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc      2563 Jul 27 08:24 pandaJob.out
[2025-07-27 09:45:59] -rw------- 1 boinc boinc    980125 Jul 27 08:24 agis_schedconf.cvmfs.json
[2025-07-27 09:45:59] -rw------- 1 boinc boinc   1593052 Jul 27 08:24 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:45:59] drwx------ 4 boinc boinc      4096 Jul 27 08:24 pilot3
[2025-07-27 09:45:59] -rw------- 1 boinc boinc 212318183 Jul 27 09:44 HITS.45743349._038668.pool.root.1
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc       530 Jul 27 09:45 boinc_task_state.xml
[2025-07-27 09:45:59] -rw------- 1 boinc boinc      1021 Jul 27 09:45 memory_monitor_summary.json
[2025-07-27 09:45:59] -rw------- 1 boinc boinc    243693 Jul 27 09:45 log.45743349._038668.job.log.tgz.1
[2025-07-27 09:45:59] -rw------- 1 boinc boinc      7765 Jul 27 09:45 heartbeat.json
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc        27 Jul 27 09:45 wrapper_checkpoint.txt
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc      8192 Jul 27 09:45 boinc_mmap_file
[2025-07-27 09:45:59] -rw------- 1 boinc boinc       747 Jul 27 09:45 pilotlog.txt
[2025-07-27 09:45:59] -rw------- 1 boinc boinc        95 Jul 27 09:45 pilot_heartbeat.json
[2025-07-27 09:45:59] -rw------- 1 boinc boinc    475293 Jul 27 09:45 log.45743349._038668.job.log.1
[2025-07-27 09:45:59] -rw------- 1 boinc boinc       357 Jul 27 09:45 output.list
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc       620 Jul 27 09:45 runtime_log
[2025-07-27 09:45:59] -rw------- 1 boinc boinc    737280 Jul 27 09:45 result.tar.gz
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc      8734 Jul 27 09:45 runtime_log.err
[2025-07-27 09:45:59] -rw------- 1 boinc boinc       659 Jul 27 09:45 1KZKDmmNuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsFSLDmw8tqIm.diag
[2025-07-27 09:45:59] -rw-r--r-- 1 boinc boinc     21715 Jul 27 09:45 stderr.txt
[2025-07-27 09:45:59] HITS file was successfully produced:
[2025-07-27 09:45:59] -rw------- 1 boinc boinc 212318183 Jul 27 09:44 shared/HITS.pool.root.1
[2025-07-27 09:45:59]  *** Contents of shared directory: ***
[2025-07-27 09:45:59] total 431780
[2025-07-27 09:45:59] -rw-r--r-- 2 boinc boinc 228514339 Jul 27 08:24 ATLAS.root_0
[2025-07-27 09:45:59] -rw-r--r-- 2 boinc boinc    542893 Jul 27 08:24 input.tar.gz
[2025-07-27 09:45:59] -rw-r--r-- 2 boinc boinc     15095 Jul 27 08:24 start_atlas.sh
[2025-07-27 09:45:59] -rw------- 1 boinc boinc 212318183 Jul 27 09:44 HITS.pool.root.1
[2025-07-27 09:45:59] -rw------- 1 boinc boinc    737280 Jul 27 09:45 result.tar.gz
09:46:00 (3299012): run_atlas exited; CPU time 18517.058998
09:46:00 (3299012): called boinc_finish(0)

</stderr_txt>
]]>

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