Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:03:00 (11827): wrapper (7.7.26015): starting
15:03:00 (11827): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 15:03:00] Arguments: --nthreads 8
[2025-07-26 15:03:00] Threads: 8
[2025-07-26 15:03:00] Checking for CVMFS
[2025-07-26 15:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 15:03:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 15:03:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 15:03:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 15:03:00] 2.11.2.0 3213 515893 245172 148786 0 188 19896988 20275201 917 130560 0 178103773 99.988 22500872 19698 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 15:03:00] CVMFS is ok
[2025-07-26 15:03:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 15:03:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 15:03:00] Further information can be found at the LHC@home message board.
[2025-07-26 15:03:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 15:03:00] Checking for apptainer binary...
[2025-07-26 15:03:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 15:03:00] Running /usr/bin/apptainer --version
[2025-07-26 15:03:00] apptainer version 1.3.2-1.el7
[2025-07-26 15:03:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 15:03:01] c-205-38.aglt2.org
[2025-07-26 15:03:01] apptainer works
[2025-07-26 15:03:01] Set ATHENA_PROC_NUMBER=8
[2025-07-26 15:03:01] Set ATHENA_CORE_NUMBER=8
[2025-07-26 15:03:01] Starting ATLAS job with PandaID=6745228190
[2025-07-26 15:03:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:04:31]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:04:31] 2025-07-26 20:03:52,850 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2025-07-26 16:04:31] 2025-07-26 20:03:52,850 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 16:04:31] 2025-07-26 20:03:52,850 | INFO     | log transfer has been attempted: DONE
[2025-07-26 16:04:31] 2025-07-26 20:03:52,850 | INFO     | job 6745228190 has state 'running' - writing heartbeat
[2025-07-26 16:04:31] 2025-07-26 20:03:52,851 | INFO     | total number of processed events: 400 (read)
[2025-07-26 16:04:31] 2025-07-26 20:03:52,851 | INFO     | executing command: lscpu
[2025-07-26 16:04:31] 2025-07-26 20:03:52,881 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 16:04:31] 2025-07-26 20:03:55,211 | INFO     | job 6745228190 has state=finished
[2025-07-26 16:04:31] 2025-07-26 20:03:55,212 | INFO     | preparing for final server update for job 6745228190 in state='finished'
[2025-07-26 16:04:31] 2025-07-26 20:03:55,264 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 16:04:31] 2025-07-26 20:03:55,264 | INFO     | this job has now completed (state=finished)
[2025-07-26 16:04:31] 2025-07-26 20:03:55,264 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 16:04:31] 2025-07-26 20:03:55,264 | INFO     | log transfer has been attempted: DONE
[2025-07-26 16:04:31] 2025-07-26 20:03:55,264 | INFO     | job 6745228190 has finished - writing final server update
[2025-07-26 16:04:31] 2025-07-26 20:03:55,264 | INFO     | total number of processed events: 400 (read)
[2025-07-26 16:04:31] 2025-07-26 20:03:55,265 | INFO     | executing command: lscpu
[2025-07-26 16:04:31] 2025-07-26 20:03:56,066 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 16:04:31] 2025-07-26 20:03:56,073 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2584.313625
[2025-07-26 16:04:31] 2025-07-26 20:03:56,075 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745228190/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:04:31] 2025-07-26 20:03:56,075 | INFO     | extracted standard info from prmon json
[2025-07-26 16:04:31] 2025-07-26 20:03:56,075 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 16:04:31] 2025-07-26 20:03:56,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 16:04:31] 2025-07-26 20:03:56,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:04:31] 2025-07-26 20:03:56,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | sum of square deviations: 46147842.0
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | sum of deviations: -1087767615.9999998
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | mean x: 1753558501.0
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | mean y: 2546322.4716981133
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | -- intersect: 41336313352.12615
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | intersect: 41336313352.12615
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | chi2: 0.014176231409434964
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | -- intersect: 41336313352.12615
[2025-07-26 16:04:31] 2025-07-26 20:03:56,077 | INFO     | current memory leak: -23.57 B/s (using 53 data points, chi2=0.01)
[2025-07-26 16:04:31] 2025-07-26 20:03:56,078 | INFO     | could have reported an average CPU frequency of 2946 MHz (5 samples)
[2025-07-26 16:04:31] 2025-07-26 20:03:56,091 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 16:04:31] 2025-07-26 20:03:58,384 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 16:04:31] 2025-07-26 20:03:58,388 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2661.1202499999995
[2025-07-26 16:04:31] 2025-07-26 20:03:58,392 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745228190/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:04:31] 2025-07-26 20:03:58,393 | INFO     | extracted standard info from prmon json
[2025-07-26 16:04:31] 2025-07-26 20:03:58,393 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 16:04:31] 2025-07-26 20:03:58,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 16:04:31] 2025-07-26 20:03:58,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:04:31] 2025-07-26 20:03:58,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:04:31] 2025-07-26 20:03:58,395 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:04:31] 2025-07-26 20:03:58,396 | INFO     | sum of square deviations: 46147842.0
[2025-07-26 16:04:31] 2025-07-26 20:03:58,396 | INFO     | sum of deviations: -1087767615.9999998
[2025-07-26 16:04:31] 2025-07-26 20:03:58,396 | INFO     | mean x: 1753558501.0
[2025-07-26 16:04:31] 2025-07-26 20:03:58,396 | INFO     | mean y: 2546322.4716981133
[2025-07-26 16:04:31] 2025-07-26 20:03:58,396 | INFO     | -- intersect: 41336313352.12615
[2025-07-26 16:04:31] 2025-07-26 20:03:58,396 | INFO     | intersect: 41336313352.12615
[2025-07-26 16:04:31] 2025-07-26 20:03:58,397 | INFO     | chi2: 0.014176231409434964
[2025-07-26 16:04:31] 2025-07-26 20:03:58,397 | INFO     | -- intersect: 41336313352.12615
[2025-07-26 16:04:31] 2025-07-26 20:03:58,397 | INFO     | current memory leak: -23.57 B/s (using 53 data points, chi2=0.01)
[2025-07-26 16:04:31] 2025-07-26 20:03:58,397 | INFO     | could have reported an average CPU frequency of 2898 MHz (6 samples)
[2025-07-26 16:04:31] 2025-07-26 20:03:58,397 | INFO     | ..............................
[2025-07-26 16:04:31] 2025-07-26 20:03:58,397 | INFO     | . Timing measurements:
[2025-07-26 16:04:31] 2025-07-26 20:03:58,398 | INFO     | . get job = 0 s
[2025-07-26 16:04:31] 2025-07-26 20:03:58,398 | INFO     | . initial setup = 2 s
[2025-07-26 16:04:31] 2025-07-26 20:03:58,398 | INFO     | . payload setup = 4 s
[2025-07-26 16:04:31] 2025-07-26 20:03:58,398 | INFO     | . stage-in = 0 s
[2025-07-26 16:04:31] 2025-07-26 20:03:58,398 | INFO     | . payload execution = 3619 s
[2025-07-26 16:04:31] 2025-07-26 20:03:58,398 | INFO     | . stage-out = 0 s
[2025-07-26 16:04:31] 2025-07-26 20:03:58,398 | INFO     | . log creation = 0 s
[2025-07-26 16:04:31] 2025-07-26 20:03:58,398 | INFO     | ..............................
[2025-07-26 16:04:31] 2025-07-26 20:03:58,490 | INFO     | 
[2025-07-26 16:04:31] 2025-07-26 20:03:58,491 | INFO     | job summary report
[2025-07-26 16:04:31] 2025-07-26 20:03:58,491 | INFO     | --------------------------------------------------
[2025-07-26 16:04:31] 2025-07-26 20:03:58,491 | INFO     | PanDA job id: 6745228190
[2025-07-26 16:04:31] 2025-07-26 20:03:58,491 | INFO     | task id: 45743349
[2025-07-26 16:04:31] 2025-07-26 20:03:58,491 | INFO     | errors: (none)
[2025-07-26 16:04:31] 2025-07-26 20:03:58,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:04:31] 2025-07-26 20:03:58,491 | INFO     | pilot state: finished 
[2025-07-26 16:04:31] 2025-07-26 20:03:58,491 | INFO     | transexitcode: 0
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | exeerrorcode: 0
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | exeerrordiag: 
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | exitcode: 0
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | exitmsg: OK
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | cpuconsumptiontime: 26996 s
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | nevents: 400
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | neventsw: 0
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | pid: 21903
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | pgrp: 21903
[2025-07-26 16:04:31] 2025-07-26 20:03:58,492 | INFO     | corecount: 8
[2025-07-26 16:04:31] 2025-07-26 20:03:58,493 | INFO     | event service: False
[2025-07-26 16:04:31] 2025-07-26 20:03:58,493 | INFO     | sizes: {0: 2397304, 1: 2397503, 3: 2397765, 11: 2397793, 3627: 2423576, 3628: 2432574, 3630: 2432758, 3636: 2433008}
[2025-07-26 16:04:31] 2025-07-26 20:03:58,493 | INFO     | --------------------------------------------------
[2025-07-26 16:04:31] 2025-07-26 20:03:58,493 | INFO     | 
[2025-07-26 16:04:31] 2025-07-26 20:03:58,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 16:04:31] 2025-07-26 20:03:58,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:04:31] 2025-07-26 20:03:58,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,512 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:04:31] 2025-07-26 20:03:58,513 | INFO     | job 6745228190 has completed (purged errors)
[2025-07-26 16:04:31] 2025-07-26 20:03:58,513 | INFO     | overall cleanup function is called
[2025-07-26 16:04:31] 2025-07-26 20:03:59,520 | INFO     | --- collectZombieJob: --- 10, [21903]
[2025-07-26 16:04:31] 2025-07-26 20:03:59,520 | INFO     | zombie collector waiting for pid 21903
[2025-07-26 16:04:31] 2025-07-26 20:03:59,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:04:31] 2025-07-26 20:03:59,521 | INFO     | collected zombie processes
[2025-07-26 16:04:31] 2025-07-26 20:03:59,521 | INFO     | will attempt to kill all subprocesses of pid=21903
[2025-07-26 16:04:31] 2025-07-26 20:03:59,613 | INFO     | process IDs to be killed: [21903] (in reverse order)
[2025-07-26 16:04:31] 2025-07-26 20:03:59,654 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:04:31] 2025-07-26 20:03:59,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:04:31] 2025-07-26 20:03:59,656 | INFO     | did not find any defunct processes belonging to 21903
[2025-07-26 16:04:31] 2025-07-26 20:03:59,657 | INFO     | did not find any defunct processes belonging to 21903
[2025-07-26 16:04:31] 2025-07-26 20:03:59,657 | INFO     | ready for new job
[2025-07-26 16:04:31] 2025-07-26 20:03:59,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:04:31] 2025-07-26 20:03:59,659 | INFO     | ***************************************
[2025-07-26 16:04:31] 2025-07-26 20:03:59,659 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:04:31] 2025-07-26 20:03:59,659 | INFO     | ***************************************
[2025-07-26 16:04:31] 2025-07-26 20:03:59,659 | INFO     | 
[2025-07-26 16:04:31] 2025-07-26 20:03:59,660 | INFO     | architecture information:
[2025-07-26 16:04:31] 2025-07-26 20:03:59,660 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:04:31] 2025-07-26 20:03:59,671 | INFO     | cat /etc/os-release:
[2025-07-26 16:04:31] NAME="CentOS Linux"
[2025-07-26 16:04:31] VERSION="7 (Core)"
[2025-07-26 16:04:31] ID="centos"
[2025-07-26 16:04:31] ID_LIKE="rhel fedora"
[2025-07-26 16:04:31] VERSION_ID="7"
[2025-07-26 16:04:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:04:31] ANSI_COLOR="0;31"
[2025-07-26 16:04:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:04:31] HOME_URL="https://www.centos.org/"
[2025-07-26 16:04:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:04:31] 
[2025-07-26 16:04:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:04:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:04:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:04:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:04:31] 
[2025-07-26 16:04:31] 2025-07-26 20:03:59,672 | INFO     | ***************************************
[2025-07-26 16:04:31] 2025-07-26 20:04:00,175 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 16:04:31] 2025-07-26 20:04:00,191 | INFO     | sufficient remaining disk space (32889634816 B)
[2025-07-26 16:04:31] 2025-07-26 20:04:00,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:04:31] 2025-07-26 20:04:00,192 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:04:31] 2025-07-26 20:04:00,192 | INFO     | update_server=False
[2025-07-26 16:04:31] 2025-07-26 20:04:00,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:04:31] 2025-07-26 20:04:00,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:04:31] 2025-07-26 20:04:00,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:04:31] 2025-07-26 20:04:00,193 | INFO     | aborting loop
[2025-07-26 16:04:31] 2025-07-26 20:04:00,399 | INFO     | all payload control threads have been joined
[2025-07-26 16:04:31] 2025-07-26 20:04:00,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:04:31] 2025-07-26 20:04:01,107 | INFO     | all data control threads have been joined
[2025-07-26 16:04:31] 2025-07-26 20:04:01,198 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:01,198 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:01,198 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:01,274 | INFO     | all job control threads have been joined
[2025-07-26 16:04:31] 2025-07-26 20:04:01,391 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:01,405 | INFO     | [payload] control thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:01,480 | INFO     | [job] validate thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:01,576 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:01,792 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:01,956 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:02,112 | INFO     | [data] control thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:02,279 | INFO     | [job] control thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:02,308 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:02,477 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:02,491 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:02,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:04:31] 2025-07-26 20:04:06,837 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:11,205 | INFO     | job.realtimelogging is not enabled
[2025-07-26 16:04:31] 2025-07-26 20:04:12,207 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:04:31] 2025-07-26 20:04:14,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014739081024)>', '<ExcThread(monitor, started 140014306449152)>']
[2025-07-26 16:04:31] 2025-07-26 20:04:19,121 | INFO     | all workflow threads have been joined
[2025-07-26 16:04:31] 2025-07-26 20:04:19,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:04:31] 2025-07-26 20:04:19,122 | INFO     | traces error code: 0
[2025-07-26 16:04:31] 2025-07-26 20:04:19,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:04:31] 2025-07-26 20:04:31,214 | INFO     | PID=15486 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 16:04:31] 2025-07-26 20:04:31,215 | INFO     | .. there are 2 such processes running
[2025-07-26 16:04:31] 2025-07-26 20:04:31,215 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:04:31] 2025-07-26 20:04:31,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:04:31] 2025-07-26 20:04:31,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:04:31] 2025-07-26 20:04:31,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:04:31] 2025-07-26 20:04:31,215 | INFO     | [monitor] control thread has ended
[2025-07-26 16:04:31] 2025-07-26 20:04:31,276 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:04:31] 2025-07-26 20:04:31,279 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:04:31] 2025-07-26 20:04:31,281 [wrapper] pilotpid: 15486
[2025-07-26 16:04:31] 2025-07-26 20:04:31,283 [wrapper] Pilot exit status: 0
[2025-07-26 16:04:31] 2025-07-26 20:04:31,291 [wrapper] pandaids: 6745228190
[2025-07-26 16:04:31] 2025-07-26 20:04:31,310 [wrapper] cleanup supervisor_pilot  1031 15487
[2025-07-26 16:04:31] 2025-07-26 20:04:31,313 [wrapper] Test setup, not cleaning
[2025-07-26 16:04:31] 2025-07-26 20:04:31,316 [wrapper] apfmon messages muted
[2025-07-26 16:04:31] 2025-07-26 20:04:31,318 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:04:31] 2025-07-26 20:04:31,321 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:04:31]  *** Error codes and diagnostics ***
[2025-07-26 16:04:31]     "exeErrorCode": 0,
[2025-07-26 16:04:31]     "exeErrorDiag": "",
[2025-07-26 16:04:31]     "pilotErrorCode": 0,
[2025-07-26 16:04:31]     "pilotErrorDiag": "",
[2025-07-26 16:04:31]  *** Listing of results directory ***
[2025-07-26 16:04:31] total 433228
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 09:41 pilot3.tar.gz
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 09:43 queuedata.json
[2025-07-26 16:04:31] -rwx------ 1 boincer umatlas     36292 Jul 26 09:44 runpilot2-wrapper.sh
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas       100 Jul 26 15:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:04:31] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 15:02 run_atlas
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas       105 Jul 26 15:02 job.xml
[2025-07-26 16:04:31] -rw-r--r-- 2 boincer umatlas 229374925 Jul 26 15:03 EVNT.45743347._002208.pool.root.1
[2025-07-26 16:04:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 15:03 start_atlas.sh
[2025-07-26 16:04:31] drwxrwx--x 2 boincer umatlas      4096 Jul 26 15:03 shared
[2025-07-26 16:04:31] -rw-r--r-- 2 boincer umatlas    542894 Jul 26 15:03 input.tar.gz
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas         0 Jul 26 15:03 boinc_lockfile
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 15:03 pandaJob.out
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas    980125 Jul 26 15:03 agis_schedconf.cvmfs.json
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas   1593052 Jul 26 15:03 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:04:31] drwx------ 4 boincer umatlas      4096 Jul 26 15:03 pilot3
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas      6050 Jul 26 16:00 init_data.xml
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas 209022131 Jul 26 16:03 HITS.45743349._038644.pool.root.1
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas       529 Jul 26 16:03 boinc_task_state.xml
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas        95 Jul 26 16:03 pilot_heartbeat.json
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas      1043 Jul 26 16:03 memory_monitor_summary.json
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas    299544 Jul 26 16:03 log.45743349._038644.job.log.tgz.1
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas      7834 Jul 26 16:03 heartbeat.json
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 16:04 boinc_mmap_file
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas        27 Jul 26 16:04 wrapper_checkpoint.txt
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas       820 Jul 26 16:04 pilotlog.txt
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas    377989 Jul 26 16:04 log.45743349._038644.job.log.1
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas       357 Jul 26 16:04 output.list
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas       620 Jul 26 16:04 runtime_log
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas    696320 Jul 26 16:04 result.tar.gz
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas       655 Jul 26 16:04 uULODmlNuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaFSLDm6BLvPn.diag
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 16:04 runtime_log.err
[2025-07-26 16:04:31] -rw-r--r-- 1 boincer umatlas     21767 Jul 26 16:04 stderr.txt
[2025-07-26 16:04:31] HITS file was successfully produced:
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas 209022131 Jul 26 16:03 shared/HITS.pool.root.1
[2025-07-26 16:04:31]  *** Contents of shared directory: ***
[2025-07-26 16:04:31] total 429356
[2025-07-26 16:04:31] -rw-r--r-- 2 boincer umatlas 229374925 Jul 26 15:03 ATLAS.root_0
[2025-07-26 16:04:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 15:03 start_atlas.sh
[2025-07-26 16:04:31] -rw-r--r-- 2 boincer umatlas    542894 Jul 26 15:03 input.tar.gz
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas 209022131 Jul 26 16:03 HITS.pool.root.1
[2025-07-26 16:04:31] -rw------- 1 boincer umatlas    696320 Jul 26 16:04 result.tar.gz
16:04:32 (11827): run_atlas exited; CPU time 26965.501603
16:04:32 (11827): called boinc_finish(0)

</stderr_txt>
]]>

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