Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:11:23 (3371596): wrapper (7.7.26015): starting
15:11:23 (3371596): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 15:11:23] Arguments: --nthreads 8
[2025-07-26 15:11:23] Threads: 8
[2025-07-26 15:11:23] Checking for CVMFS
[2025-07-26 15:11:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 15:11:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 15:11:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 15:11:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 15:11:24] 2.13.0.0 100689 26196 285068 148786 2 608 28491596 32935936 23934 16776704 0 192304307 99.567 260164040 20233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 15:11:24] CVMFS is ok
[2025-07-26 15:11:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 15:11:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 15:11:24] Further information can be found at the LHC@home message board.
[2025-07-26 15:11:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 15:11:24] Checking for apptainer binary...
[2025-07-26 15:11:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 15:11:24] Running /usr/bin/apptainer --version
[2025-07-26 15:11:24] apptainer version 1.4.1-1.el9
[2025-07-26 15:11:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 15:11:24] c7-2-38.aglt2.org
[2025-07-26 15:11:24] apptainer works
[2025-07-26 15:11:24] Set ATHENA_PROC_NUMBER=8
[2025-07-26 15:11:24] Set ATHENA_CORE_NUMBER=8
[2025-07-26 15:11:24] Starting ATLAS job with PandaID=6745133337
[2025-07-26 15:11:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 17:01:17]  *** The last 200 lines of the pilot log: ***
[2025-07-26 17:01:17] 2025-07-26 21:00:43,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 17:01:17] 2025-07-26 21:00:43,561 | INFO     | fitting pss+swap vs Time
[2025-07-26 17:01:17] 2025-07-26 21:00:43,562 | INFO     | sum of square deviations: 379832238.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,563 | INFO     | sum of deviations: 5764966772.000001
[2025-07-26 17:01:17] 2025-07-26 21:00:43,563 | INFO     | mean x: 1753560374.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,563 | INFO     | mean y: 2325720.6728971964
[2025-07-26 17:01:17] 2025-07-26 21:00:43,563 | INFO     | -- intersect: -26612627612.503353
[2025-07-26 17:01:17] 2025-07-26 21:00:43,563 | INFO     | intersect: -26612627612.503353
[2025-07-26 17:01:17] 2025-07-26 21:00:43,563 | INFO     | chi2: 2.1753013907127876
[2025-07-26 17:01:17] 2025-07-26 21:00:43,563 | INFO     | sum of square deviations: 329031285.5
[2025-07-26 17:01:17] 2025-07-26 21:00:43,564 | INFO     | sum of deviations: 12023244265.000002
[2025-07-26 17:01:17] 2025-07-26 21:00:43,564 | INFO     | mean x: 1753560221.5
[2025-07-26 17:01:17] 2025-07-26 21:00:43,564 | INFO     | mean y: 2343734.843137255
[2025-07-26 17:01:17] 2025-07-26 21:00:43,564 | INFO     | -- intersect: -64075097546.897865
[2025-07-26 17:01:17] 2025-07-26 21:00:43,564 | INFO     | intersect: -64075097546.897865
[2025-07-26 17:01:17] 2025-07-26 21:00:43,564 | INFO     | chi2: 1.3736279070219781
[2025-07-26 17:01:17] 2025-07-26 21:00:43,564 | INFO     | current chi2=1.3736279070219781 (change=36.85344417621701 %)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,564 | INFO     | sum of square deviations: 282974608.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,565 | INFO     | sum of deviations: 11291819007.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,565 | INFO     | mean x: 1753560069.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,565 | INFO     | mean y: 2341310.237113402
[2025-07-26 17:01:17] 2025-07-26 21:00:43,565 | INFO     | -- intersect: -69971721228.4428
[2025-07-26 17:01:17] 2025-07-26 21:00:43,565 | INFO     | intersect: -69971721228.4428
[2025-07-26 17:01:17] 2025-07-26 21:00:43,565 | INFO     | chi2: 1.376665243114036
[2025-07-26 17:01:17] 2025-07-26 21:00:43,565 | INFO     | current chi2=1.376665243114036 (change=-0.22111782066533983 %)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,565 | INFO     | right removable region: 96
[2025-07-26 17:01:17] 2025-07-26 21:00:43,566 | INFO     | sum of square deviations: 329031285.5
[2025-07-26 17:01:17] 2025-07-26 21:00:43,566 | INFO     | sum of deviations: -6105715913.5
[2025-07-26 17:01:17] 2025-07-26 21:00:43,566 | INFO     | mean x: 1753560526.5
[2025-07-26 17:01:17] 2025-07-26 21:00:43,566 | INFO     | mean y: 2360206.0098039214
[2025-07-26 17:01:17] 2025-07-26 21:00:43,566 | INFO     | -- intersect: 32542555876.662796
[2025-07-26 17:01:17] 2025-07-26 21:00:43,566 | INFO     | intersect: 32542555876.662796
[2025-07-26 17:01:17] 2025-07-26 21:00:43,566 | INFO     | chi2: 0.8627735202291494
[2025-07-26 17:01:17] 2025-07-26 21:00:43,567 | INFO     | current chi2=0.8627735202291494 (change=60.337747959309596 %)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,567 | INFO     | sum of square deviations: 282974608.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,567 | INFO     | sum of deviations: -5428278919.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,567 | INFO     | mean x: 1753560679.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,567 | INFO     | mean y: 2358086.3711340204
[2025-07-26 17:01:17] 2025-07-26 21:00:43,567 | INFO     | -- intersect: 33640770148.42805
[2025-07-26 17:01:17] 2025-07-26 21:00:43,567 | INFO     | intersect: 33640770148.42805
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | chi2: 0.8460915238580423
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | current chi2=0.8460915238580423 (change=1.9335313358569983 %)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | left removable region: 20
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | sum of square deviations: 136095575.0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | sum of deviations: -9361730.999999989
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | mean x: 1753560648.5
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | mean y: 2381712.8157894737
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | -- intersect: 123005495.6495997
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | intersect: 123005495.6495997
[2025-07-26 17:01:17] 2025-07-26 21:00:43,568 | INFO     | chi2: 0.0020927656229392006
[2025-07-26 17:01:17] 2025-07-26 21:00:43,569 | INFO     | -- intersect: 123005495.6495997
[2025-07-26 17:01:17] 2025-07-26 21:00:43,569 | INFO     | current memory leak: -0.07 B/s (using 76 data points, chi2=0.00)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,569 | INFO     | could have reported an average CPU frequency of 3147 MHz (7 samples)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,569 | INFO     | ..............................
[2025-07-26 17:01:17] 2025-07-26 21:00:43,569 | INFO     | . Timing measurements:
[2025-07-26 17:01:17] 2025-07-26 21:00:43,569 | INFO     | . get job = 0 s
[2025-07-26 17:01:17] 2025-07-26 21:00:43,569 | INFO     | . initial setup = 3 s
[2025-07-26 17:01:17] 2025-07-26 21:00:43,569 | INFO     | . payload setup = 12 s
[2025-07-26 17:01:17] 2025-07-26 21:00:43,570 | INFO     | . stage-in = 0 s
[2025-07-26 17:01:17] 2025-07-26 21:00:43,570 | INFO     | . payload execution = 6498 s
[2025-07-26 17:01:17] 2025-07-26 21:00:43,570 | INFO     | . stage-out = 0 s
[2025-07-26 17:01:17] 2025-07-26 21:00:43,570 | INFO     | . log creation = 0 s
[2025-07-26 17:01:17] 2025-07-26 21:00:43,570 | INFO     | ..............................
[2025-07-26 17:01:17] 2025-07-26 21:00:43,633 | INFO     | 
[2025-07-26 17:01:17] 2025-07-26 21:00:43,633 | INFO     | job summary report
[2025-07-26 17:01:17] 2025-07-26 21:00:43,633 | INFO     | --------------------------------------------------
[2025-07-26 17:01:17] 2025-07-26 21:00:43,633 | INFO     | PanDA job id: 6745133337
[2025-07-26 17:01:17] 2025-07-26 21:00:43,633 | INFO     | task id: 45743349
[2025-07-26 17:01:17] 2025-07-26 21:00:43,633 | INFO     | errors: (none)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | pilot state: finished 
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | transexitcode: 0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | exeerrorcode: 0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | exeerrordiag: 
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | exitcode: 0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | exitmsg: OK
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | cpuconsumptiontime: 37668 s
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | nevents: 400
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | neventsw: 0
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | pid: 3385663
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | pgrp: 3385663
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | corecount: 8
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | event service: False
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | sizes: {0: 2397475, 8: 2397737, 11: 2397765, 6514: 2424881, 6515: 2433879, 6518: 2433935, 6524: 2434257}
[2025-07-26 17:01:17] 2025-07-26 21:00:43,634 | INFO     | --------------------------------------------------
[2025-07-26 17:01:17] 2025-07-26 21:00:43,635 | INFO     | 
[2025-07-26 17:01:17] 2025-07-26 21:00:43,635 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 17:01:17] 2025-07-26 21:00:43,657 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | job 6745133337 has completed (purged errors)
[2025-07-26 17:01:17] 2025-07-26 21:00:43,659 | INFO     | overall cleanup function is called
[2025-07-26 17:01:17] 2025-07-26 21:00:44,340 | INFO     | PID=3376153 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 17:01:17] 2025-07-26 21:00:44,340 | INFO     | .. there are 28 such processes running
[2025-07-26 17:01:17] 2025-07-26 21:00:44,667 | INFO     | --- collectZombieJob: --- 10, [3385663]
[2025-07-26 17:01:17] 2025-07-26 21:00:44,668 | INFO     | zombie collector waiting for pid 3385663
[2025-07-26 17:01:17] 2025-07-26 21:00:44,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 17:01:17] 2025-07-26 21:00:44,668 | INFO     | collected zombie processes
[2025-07-26 17:01:17] 2025-07-26 21:00:44,668 | INFO     | will attempt to kill all subprocesses of pid=3385663
[2025-07-26 17:01:17] 2025-07-26 21:00:45,205 | INFO     | process IDs to be killed: [3385663] (in reverse order)
[2025-07-26 17:01:17] 2025-07-26 21:00:45,386 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 17:01:17] 2025-07-26 21:00:45,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 17:01:17] 2025-07-26 21:00:45,409 | INFO     | did not find any defunct processes belonging to 3385663
[2025-07-26 17:01:17] 2025-07-26 21:00:45,433 | INFO     | did not find any defunct processes belonging to 3385663
[2025-07-26 17:01:17] 2025-07-26 21:00:45,433 | INFO     | ready for new job
[2025-07-26 17:01:17] 2025-07-26 21:00:45,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 17:01:17] 2025-07-26 21:00:45,435 | INFO     | ***************************************
[2025-07-26 17:01:17] 2025-07-26 21:00:45,435 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 17:01:17] 2025-07-26 21:00:45,435 | INFO     | ***************************************
[2025-07-26 17:01:17] 2025-07-26 21:00:45,435 | INFO     | 
[2025-07-26 17:01:17] 2025-07-26 21:00:45,454 | INFO     | architecture information:
[2025-07-26 17:01:17] 2025-07-26 21:00:45,455 | INFO     | executing command: cat /etc/os-release
[2025-07-26 17:01:17] 2025-07-26 21:00:45,475 | INFO     | cat /etc/os-release:
[2025-07-26 17:01:17] NAME="CentOS Linux"
[2025-07-26 17:01:17] VERSION="7 (Core)"
[2025-07-26 17:01:17] ID="centos"
[2025-07-26 17:01:17] ID_LIKE="rhel fedora"
[2025-07-26 17:01:17] VERSION_ID="7"
[2025-07-26 17:01:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 17:01:17] ANSI_COLOR="0;31"
[2025-07-26 17:01:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 17:01:17] HOME_URL="https://www.centos.org/"
[2025-07-26 17:01:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 17:01:17] 
[2025-07-26 17:01:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 17:01:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 17:01:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 17:01:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 17:01:17] 
[2025-07-26 17:01:17] 2025-07-26 21:00:45,475 | INFO     | ***************************************
[2025-07-26 17:01:17] 2025-07-26 21:00:45,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 17:01:17] 2025-07-26 21:00:45,998 | INFO     | sufficient remaining disk space (75835113472 B)
[2025-07-26 17:01:17] 2025-07-26 21:00:45,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 17:01:17] 2025-07-26 21:00:45,998 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 17:01:17] 2025-07-26 21:00:45,998 | INFO     | update_server=False
[2025-07-26 17:01:17] 2025-07-26 21:00:45,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 17:01:17] 2025-07-26 21:00:45,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:01:17] 2025-07-26 21:00:45,999 | INFO     | aborting loop
[2025-07-26 17:01:17] 2025-07-26 21:00:45,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 17:01:17] 2025-07-26 21:00:46,392 | INFO     | all data control threads have been joined
[2025-07-26 17:01:17] 2025-07-26 21:00:46,855 | INFO     | all payload control threads have been joined
[2025-07-26 17:01:17] 2025-07-26 21:00:47,003 | INFO     | [job] retrieve thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,005 | INFO     | [job] job monitor thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,021 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,044 | INFO     | [payload] failed_post thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,278 | INFO     | all job control threads have been joined
[2025-07-26 17:01:17] 2025-07-26 21:00:47,289 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,365 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,398 | INFO     | [data] control thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,616 | INFO     | [data] copytool_in thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,860 | INFO     | [payload] control thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:47,968 | INFO     | [job] validate thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:48,006 | INFO     | [data] copytool_out thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:48,267 | INFO     | [payload] validate_post thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:48,283 | INFO     | [job] control thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:48,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 17:01:17] 2025-07-26 21:00:48,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:01:17] 2025-07-26 21:00:49,649 | INFO     | [job] queue monitor thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:52,344 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:56,224 | INFO     | job.realtimelogging is not enabled
[2025-07-26 17:01:17] 2025-07-26 21:00:57,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 17:01:17] 2025-07-26 21:00:58,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622407624512)>', '<ExcThread(monitor, started 140621901711104)>']
[2025-07-26 17:01:17] 2025-07-26 21:01:03,828 | INFO     | all workflow threads have been joined
[2025-07-26 17:01:17] 2025-07-26 21:01:03,828 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 17:01:17] 2025-07-26 21:01:03,829 | INFO     | traces error code: 0
[2025-07-26 17:01:17] 2025-07-26 21:01:03,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 17:01:17] 2025-07-26 21:01:17,059 | INFO     | PID=3376153 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 17:01:17] 2025-07-26 21:01:17,059 | INFO     | .. there are 28 such processes running
[2025-07-26 17:01:17] 2025-07-26 21:01:17,060 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 17:01:17] 2025-07-26 21:01:17,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 17:01:17] 2025-07-26 21:01:17,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 17:01:17] 2025-07-26 21:01:17,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 17:01:17] 2025-07-26 21:01:17,060 | INFO     | [monitor] control thread has ended
[2025-07-26 17:01:17] 2025-07-26 21:01:17,267 [wrapper] ==== pilot stdout END ====
[2025-07-26 17:01:17] 2025-07-26 21:01:17,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 17:01:17] 2025-07-26 21:01:17,274 [wrapper] pilotpid: 3376153
[2025-07-26 17:01:17] 2025-07-26 21:01:17,278 [wrapper] Pilot exit status: 0
[2025-07-26 17:01:17] 2025-07-26 21:01:17,291 [wrapper] pandaids: 6745133337
[2025-07-26 17:01:17] 2025-07-26 21:01:17,415 [wrapper] cleanup supervisor_pilot  384645 3376154
[2025-07-26 17:01:17] 2025-07-26 21:01:17,419 [wrapper] Test setup, not cleaning
[2025-07-26 17:01:17] 2025-07-26 21:01:17,422 [wrapper] apfmon messages muted
[2025-07-26 17:01:17] 2025-07-26 21:01:17,425 [wrapper] ==== wrapper stdout END ====
[2025-07-26 17:01:17] 2025-07-26 21:01:17,427 [wrapper] ==== wrapper stderr END ====
[2025-07-26 17:01:17]  *** Error codes and diagnostics ***
[2025-07-26 17:01:17]     "exeErrorCode": 0,
[2025-07-26 17:01:17]     "exeErrorDiag": "",
[2025-07-26 17:01:17]     "pilotErrorCode": 0,
[2025-07-26 17:01:17]     "pilotErrorDiag": "",
[2025-07-26 17:01:17]  *** Listing of results directory ***
[2025-07-26 17:01:17] total 351452
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 06:53 pilot3.tar.gz
[2025-07-26 17:01:17] -rwx------. 1 boincer umatlas     36292 Jul 26 06:56 runpilot2-wrapper.sh
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 06:56 queuedata.json
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas       100 Jul 26 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 17:01:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 15:11 run_atlas
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas       105 Jul 26 15:11 job.xml
[2025-07-26 17:01:17] -rw-r--r--. 2 boincer umatlas 145577692 Jul 26 15:11 EVNT.45743347._002087.pool.root.1
[2025-07-26 17:01:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 15:11 start_atlas.sh
[2025-07-26 17:01:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 15:11 shared
[2025-07-26 17:01:17] -rw-r--r--. 2 boincer umatlas    542889 Jul 26 15:11 input.tar.gz
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas         0 Jul 26 15:11 boinc_lockfile
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 15:11 pandaJob.out
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas    980125 Jul 26 15:11 agis_schedconf.cvmfs.json
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas   1593052 Jul 26 15:11 agis_ddmendpoints.agis.ALL.json
[2025-07-26 17:01:17] drwx------. 4 boincer umatlas      4096 Jul 26 15:11 pilot3
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas      6932 Jul 26 16:54 init_data.xml
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas 208569373 Jul 26 17:00 HITS.45743349._036596.pool.root.1
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas       530 Jul 26 17:00 boinc_task_state.xml
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas        95 Jul 26 17:00 pilot_heartbeat.json
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas      1040 Jul 26 17:00 memory_monitor_summary.json
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas    319330 Jul 26 17:00 log.45743349._036596.job.log.tgz.1
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas      7775 Jul 26 17:00 heartbeat.json
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas        27 Jul 26 17:01 wrapper_checkpoint.txt
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 17:01 boinc_mmap_file
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas       823 Jul 26 17:01 pilotlog.txt
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas    610621 Jul 26 17:01 log.45743349._036596.job.log.1
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas       357 Jul 26 17:01 output.list
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas       620 Jul 26 17:01 runtime_log
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas    952320 Jul 26 17:01 result.tar.gz
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 17:01 runtime_log.err
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas       655 Jul 26 17:01 bOUKDmjkrz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmctRLDmqjGITn.diag
[2025-07-26 17:01:17] -rw-r--r--. 1 boincer umatlas     21004 Jul 26 17:01 stderr.txt
[2025-07-26 17:01:17] HITS file was successfully produced:
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas 208569373 Jul 26 17:00 shared/HITS.pool.root.1
[2025-07-26 17:01:17]  *** Contents of shared directory: ***
[2025-07-26 17:01:17] total 347336
[2025-07-26 17:01:17] -rw-r--r--. 2 boincer umatlas 145577692 Jul 26 15:11 ATLAS.root_0
[2025-07-26 17:01:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 15:11 start_atlas.sh
[2025-07-26 17:01:17] -rw-r--r--. 2 boincer umatlas    542889 Jul 26 15:11 input.tar.gz
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas 208569373 Jul 26 17:00 HITS.pool.root.1
[2025-07-26 17:01:17] -rw-------. 1 boincer umatlas    952320 Jul 26 17:01 result.tar.gz
17:01:19 (3371596): run_atlas exited; CPU time 37855.494864
17:01:19 (3371596): called boinc_finish(0)

</stderr_txt>
]]>

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