Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:27:11 (1169391): wrapper (7.7.26015): starting
08:27:11 (1169391): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 08:27:11] Arguments: --nthreads 3
[2025-07-27 08:27:11] Threads: 3
[2025-07-27 08:27:11] Checking for CVMFS
[2025-07-27 08:27:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 08:27:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 08:27:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 08:27:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 08:27:11] 2.9.2.0 847717 1113 75976 148803 1 56 35286011 36864000 0 130560 0 849113 99.992 35610 725 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 08:27:11] CVMFS is ok
[2025-07-27 08:27:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 08:27:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 08:27:11] Further information can be found at the LHC@home message board.
[2025-07-27 08:27:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 08:27:11] Checking for apptainer binary...
[2025-07-27 08:27:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 08:27:11] Running /usr/bin/apptainer --version
[2025-07-27 08:27:11] apptainer version 1.4.1-1.1
[2025-07-27 08:27:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 08:27:11] thA385
[2025-07-27 08:27:11] apptainer works
[2025-07-27 08:27:11] Set ATHENA_PROC_NUMBER=3
[2025-07-27 08:27:11] Set ATHENA_CORE_NUMBER=3
[2025-07-27 08:27:11] Starting ATLAS job with PandaID=6745227608
[2025-07-27 08:27:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 10:00:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 10:00:04]  mtime=0
[2025-07-27 10:00:04]  protocol_id=None
[2025-07-27 10:00:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 10:00:04]  replicas=None
[2025-07-27 10:00:04]  scope=mc23_13p6TeV
[2025-07-27 10:00:04]  status=None
[2025-07-27 10:00:04]  status_code=0
[2025-07-27 10:00:04]  storage_token=
[2025-07-27 10:00:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745227608/log.45743349._038610.job.log.tgz.1
[2025-07-27 10:00:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/76/log.45743349._038610.job.log.tgz.1
[2025-07-27 10:00:04]  workdir=None
[2025-07-27 10:00:04] ]
[2025-07-27 10:00:04] 2025-07-27 07:59:25,281 | INFO     | transferring file log.45743349._038610.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745227608/log.45743349._038610.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 10:00:04] 2025-07-27 07:59:25,281 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745227608/log.45743349._038610.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0386
[2025-07-27 10:00:04] 2025-07-27 07:59:25,295 | INFO     | adding to output.list: log.45743349._038610.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/76/log.45743349._038610.job.log.tg
[2025-07-27 10:00:04] 2025-07-27 07:59:25,295 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 10:00:04] 2025-07-27 07:59:25,295 | INFO     | summary of transferred files:
[2025-07-27 10:00:04] 2025-07-27 07:59:25,295 | INFO     |  -- lfn=log.45743349._038610.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 10:00:04] 2025-07-27 07:59:25,295 | INFO     | stage-out finished correctly
[2025-07-27 10:00:04] 2025-07-27 07:59:26,613 | INFO     | monitor loop #426: job 0:6745227608 is in state 'finished'
[2025-07-27 10:00:04] 2025-07-27 07:59:26,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:00:04] 2025-07-27 07:59:28,666 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 10:00:04] 2025-07-27 07:59:29,117 | INFO     | monitor loop #427: job 0:6745227608 is in state 'finished'
[2025-07-27 10:00:04] 2025-07-27 07:59:29,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:00:04] 2025-07-27 07:59:29,932 | INFO     | job 6745227608 has state=finished
[2025-07-27 10:00:04] 2025-07-27 07:59:29,933 | INFO     | preparing for final server update for job 6745227608 in state='finished'
[2025-07-27 10:00:04] 2025-07-27 07:59:29,933 | INFO     | this job has now completed (state=finished)
[2025-07-27 10:00:04] 2025-07-27 07:59:29,933 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 10:00:04] 2025-07-27 07:59:29,933 | INFO     | log transfer has been attempted: DONE
[2025-07-27 10:00:04] 2025-07-27 07:59:29,933 | INFO     | job 6745227608 has finished - writing final server update
[2025-07-27 10:00:04] 2025-07-27 07:59:29,933 | INFO     | total number of processed events: 400 (read)
[2025-07-27 10:00:04] 2025-07-27 07:59:29,934 | INFO     | executing command: lscpu
[2025-07-27 10:00:04] 2025-07-27 07:59:29,949 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 10:00:04] 2025-07-27 07:59:31,619 | INFO     | monitor loop #428: job 0:6745227608 is in state 'finished'
[2025-07-27 10:00:04] 2025-07-27 07:59:31,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:00:04] 2025-07-27 07:59:32,326 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 10:00:04] 2025-07-27 07:59:32,327 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3662.1486666666665
[2025-07-27 10:00:04] 2025-07-27 07:59:32,328 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745227608/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 10:00:04] 2025-07-27 07:59:32,329 | INFO     | extracted standard info from prmon json
[2025-07-27 10:00:04] 2025-07-27 07:59:32,329 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 10:00:04] 2025-07-27 07:59:32,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 10:00:04] 2025-07-27 07:59:32,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 10:00:04] 2025-07-27 07:59:32,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | fitting pss+swap vs Time
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | sum of square deviations: 183761585.0
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | sum of deviations: -12448346189.0
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | mean x: 1753600493.5
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | mean y: 2475780.285714286
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | -- intersect: 118794583610.05463
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | intersect: 118794583610.05463
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | chi2: 0.057433400421375826
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | -- intersect: 118794583610.05463
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | current memory leak: -67.74 B/s (using 84 data points, chi2=0.06)
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | could have reported an average CPU frequency of 3866 MHz (7 samples)
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | ..............................
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | . Timing measurements:
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | . get job = 0 s
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | . initial setup = 1 s
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | . payload setup = 3 s
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | . stage-in = 0 s
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | . payload execution = 5507 s
[2025-07-27 10:00:04] 2025-07-27 07:59:32,330 | INFO     | . stage-out = 0 s
[2025-07-27 10:00:04] 2025-07-27 07:59:32,331 | INFO     | . log creation = 0 s
[2025-07-27 10:00:04] 2025-07-27 07:59:32,331 | INFO     | ..............................
[2025-07-27 10:00:04] 2025-07-27 07:59:32,361 | INFO     | 
[2025-07-27 10:00:04] 2025-07-27 07:59:32,361 | INFO     | job summary report
[2025-07-27 10:00:04] 2025-07-27 07:59:32,361 | INFO     | --------------------------------------------------
[2025-07-27 10:00:04] 2025-07-27 07:59:32,361 | INFO     | PanDA job id: 6745227608
[2025-07-27 10:00:04] 2025-07-27 07:59:32,361 | INFO     | task id: 45743349
[2025-07-27 10:00:04] 2025-07-27 07:59:32,361 | INFO     | errors: (none)
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | pilot state: finished 
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | transexitcode: 0
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | exeerrorcode: 0
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | exeerrordiag: 
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | exitcode: 0
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | exitmsg: OK
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | cpuconsumptiontime: 15872 s
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | nevents: 400
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | neventsw: 0
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | pid: 1179522
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | pgrp: 1179522
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | corecount: 3
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | event service: False
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | sizes: {0: 2397427, 3: 2397689, 11: 2397717, 5514: 2424495, 5515: 2433554, 5518: 2433554, 5522: 2433876}
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | --------------------------------------------------
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | 
[2025-07-27 10:00:04] 2025-07-27 07:59:32,362 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 10:00:04] 2025-07-27 07:59:32,373 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,373 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | job 6745227608 has completed (purged errors)
[2025-07-27 10:00:04] 2025-07-27 07:59:32,374 | INFO     | overall cleanup function is called
[2025-07-27 10:00:04] 2025-07-27 07:59:33,381 | INFO     | --- collectZombieJob: --- 10, [1179522]
[2025-07-27 10:00:04] 2025-07-27 07:59:33,381 | INFO     | zombie collector waiting for pid 1179522
[2025-07-27 10:00:04] 2025-07-27 07:59:33,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 10:00:04] 2025-07-27 07:59:33,381 | INFO     | collected zombie processes
[2025-07-27 10:00:04] 2025-07-27 07:59:33,381 | INFO     | will attempt to kill all subprocesses of pid=1179522
[2025-07-27 10:00:04] 2025-07-27 07:59:33,423 | INFO     | process IDs to be killed: [1179522] (in reverse order)
[2025-07-27 10:00:04] 2025-07-27 07:59:33,448 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 10:00:04] 2025-07-27 07:59:33,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 10:00:04] 2025-07-27 07:59:33,449 | INFO     | did not find any defunct processes belonging to 1179522
[2025-07-27 10:00:04] 2025-07-27 07:59:33,450 | INFO     | did not find any defunct processes belonging to 1179522
[2025-07-27 10:00:04] 2025-07-27 07:59:33,450 | INFO     | ready for new job
[2025-07-27 10:00:04] 2025-07-27 07:59:33,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 10:00:04] 2025-07-27 07:59:33,451 | INFO     | ***************************************
[2025-07-27 10:00:04] 2025-07-27 07:59:33,451 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 10:00:04] 2025-07-27 07:59:33,451 | INFO     | ***************************************
[2025-07-27 10:00:04] 2025-07-27 07:59:33,451 | INFO     | 
[2025-07-27 10:00:04] 2025-07-27 07:59:33,451 | INFO     | architecture information:
[2025-07-27 10:00:04] 2025-07-27 07:59:33,451 | INFO     | executing command: cat /etc/os-release
[2025-07-27 10:00:04] 2025-07-27 07:59:33,460 | INFO     | cat /etc/os-release:
[2025-07-27 10:00:04] NAME="CentOS Linux"
[2025-07-27 10:00:04] VERSION="7 (Core)"
[2025-07-27 10:00:04] ID="centos"
[2025-07-27 10:00:04] ID_LIKE="rhel fedora"
[2025-07-27 10:00:04] VERSION_ID="7"
[2025-07-27 10:00:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 10:00:04] ANSI_COLOR="0;31"
[2025-07-27 10:00:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 10:00:04] HOME_URL="https://www.centos.org/"
[2025-07-27 10:00:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 10:00:04] 
[2025-07-27 10:00:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 10:00:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 10:00:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 10:00:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 10:00:04] 
[2025-07-27 10:00:04] 2025-07-27 07:59:33,460 | INFO     | ***************************************
[2025-07-27 10:00:04] 2025-07-27 07:59:33,963 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 10:00:04] 2025-07-27 07:59:33,976 | INFO     | sufficient remaining disk space (364943245312 B)
[2025-07-27 10:00:04] 2025-07-27 07:59:33,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 10:00:04] 2025-07-27 07:59:33,976 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 10:00:04] 2025-07-27 07:59:33,976 | INFO     | update_server=False
[2025-07-27 10:00:04] 2025-07-27 07:59:33,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 10:00:04] 2025-07-27 07:59:33,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:00:04] 2025-07-27 07:59:33,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 10:00:04] 2025-07-27 07:59:34,006 | INFO     | all payload control threads have been joined
[2025-07-27 10:00:04] 2025-07-27 07:59:34,124 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 10:00:04] 2025-07-27 07:59:34,124 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 10:00:04] 2025-07-27 07:59:34,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:00:04] 2025-07-27 07:59:34,124 | INFO     | will abort loop
[2025-07-27 10:00:04] 2025-07-27 07:59:34,451 | INFO     | all data control threads have been joined
[2025-07-27 10:00:04] 2025-07-27 07:59:34,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 10:00:04] 2025-07-27 07:59:34,982 | INFO     | [job] retrieve thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:34,983 | INFO     | [job] queue monitor thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:34,989 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:34,998 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:35,011 | INFO     | [payload] control thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:35,130 | INFO     | [job] job monitor thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:35,217 | INFO     | all job control threads have been joined
[2025-07-27 10:00:04] 2025-07-27 07:59:35,457 | INFO     | [data] control thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:35,627 | INFO     | [payload] validate_post thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:35,918 | INFO     | [data] copytool_in thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:35,983 | INFO     | [data] copytool_out thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:36,223 | INFO     | [job] control thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:36,312 | INFO     | [job] validate thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:36,430 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:36,463 | INFO     | [payload] failed_post thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:38,710 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:44,793 | INFO     | job.realtimelogging is not enabled
[2025-07-27 10:00:04] 2025-07-27 07:59:45,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 10:00:04] 2025-07-27 07:59:47,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715094951744)>', '<ExcThread(monitor, started 140714293831424)>']
[2025-07-27 10:00:04] 2025-07-27 07:59:52,908 | INFO     | all workflow threads have been joined
[2025-07-27 10:00:04] 2025-07-27 07:59:52,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 10:00:04] 2025-07-27 07:59:52,908 | INFO     | traces error code: 0
[2025-07-27 10:00:04] 2025-07-27 07:59:52,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 10:00:04] 2025-07-27 08:00:03,912 | INFO     | PID=1173032 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 10:00:04] 2025-07-27 08:00:03,912 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 10:00:04] 2025-07-27 08:00:03,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 10:00:04] 2025-07-27 08:00:03,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 10:00:04] 2025-07-27 08:00:03,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 10:00:04] 2025-07-27 08:00:03,913 | INFO     | [monitor] control thread has ended
[2025-07-27 10:00:04] 2025-07-27 08:00:03,958 [wrapper] ==== pilot stdout END ====
[2025-07-27 10:00:04] 2025-07-27 08:00:03,960 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 10:00:04] 2025-07-27 08:00:03,963 [wrapper] pilotpid: 1173032
[2025-07-27 10:00:04] 2025-07-27 08:00:03,965 [wrapper] Pilot exit status: 0
[2025-07-27 10:00:04] 2025-07-27 08:00:03,973 [wrapper] pandaids: 6745227608
[2025-07-27 10:00:04] 2025-07-27 08:00:03,989 [wrapper] cleanup supervisor_pilot 1192136 1173033
[2025-07-27 10:00:04] 2025-07-27 08:00:03,992 [wrapper] Test setup, not cleaning
[2025-07-27 10:00:04] 2025-07-27 08:00:03,994 [wrapper] apfmon messages muted
[2025-07-27 10:00:04] 2025-07-27 08:00:03,996 [wrapper] ==== wrapper stdout END ====
[2025-07-27 10:00:04] 2025-07-27 08:00:03,999 [wrapper] ==== wrapper stderr END ====
[2025-07-27 10:00:04]  *** Error codes and diagnostics ***
[2025-07-27 10:00:04]     "exeErrorCode": 0,
[2025-07-27 10:00:04]     "exeErrorDiag": "",
[2025-07-27 10:00:04]     "pilotErrorCode": 0,
[2025-07-27 10:00:04]     "pilotErrorDiag": "",
[2025-07-27 10:00:04]  *** Listing of results directory ***
[2025-07-27 10:00:04] total 436392
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc    530466 Jul 26 15:10 pilot3.tar.gz
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc      5112 Jul 26 15:39 queuedata.json
[2025-07-27 10:00:04] -rwx------ 1 boinc boinc     36292 Jul 26 15:39 runpilot2-wrapper.sh
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc       100 Jul 27 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 10:00:04] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 08:27 run_atlas
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc       105 Jul 27 08:27 job.xml
[2025-07-27 10:00:04] -rw-r--r-- 2 boinc boinc 232356468 Jul 27 08:27 EVNT.45743347._002207.pool.root.1
[2025-07-27 10:00:04] -rw-r--r-- 2 boinc boinc    542888 Jul 27 08:27 input.tar.gz
[2025-07-27 10:00:04] -rw-r--r-- 2 boinc boinc     15095 Jul 27 08:27 start_atlas.sh
[2025-07-27 10:00:04] drwxrwx--x 2 boinc boinc      4096 Jul 27 08:27 shared
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc         0 Jul 27 08:27 boinc_setup_complete
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc      6524 Jul 27 08:27 init_data.xml
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc         0 Jul 27 08:27 boinc_lockfile
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc      2562 Jul 27 08:27 pandaJob.out
[2025-07-27 10:00:04] -rw------- 1 boinc boinc    980125 Jul 27 08:27 agis_schedconf.cvmfs.json
[2025-07-27 10:00:04] -rw------- 1 boinc boinc   1593052 Jul 27 08:27 agis_ddmendpoints.agis.ALL.json
[2025-07-27 10:00:04] drwx------ 4 boinc boinc      4096 Jul 27 08:27 pilot3
[2025-07-27 10:00:04] -rw------- 1 boinc boinc 209097408 Jul 27 09:59 HITS.45743349._038610.pool.root.1
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc       529 Jul 27 09:59 boinc_task_state.xml
[2025-07-27 10:00:04] -rw------- 1 boinc boinc      1033 Jul 27 09:59 memory_monitor_summary.json
[2025-07-27 10:00:04] -rw------- 1 boinc boinc    228387 Jul 27 09:59 log.45743349._038610.job.log.tgz.1
[2025-07-27 10:00:04] -rw------- 1 boinc boinc      7755 Jul 27 09:59 heartbeat.json
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc      8192 Jul 27 09:59 boinc_mmap_file
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc        27 Jul 27 09:59 wrapper_checkpoint.txt
[2025-07-27 10:00:04] -rw------- 1 boinc boinc       747 Jul 27 10:00 pilotlog.txt
[2025-07-27 10:00:04] -rw------- 1 boinc boinc        95 Jul 27 10:00 pilot_heartbeat.json
[2025-07-27 10:00:04] -rw------- 1 boinc boinc    536128 Jul 27 10:00 log.45743349._038610.job.log.1
[2025-07-27 10:00:04] -rw------- 1 boinc boinc       357 Jul 27 10:00 output.list
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc       620 Jul 27 10:00 runtime_log
[2025-07-27 10:00:04] -rw------- 1 boinc boinc    788480 Jul 27 10:00 result.tar.gz
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc      8734 Jul 27 10:00 runtime_log.err
[2025-07-27 10:00:04] -rw------- 1 boinc boinc       658 Jul 27 10:00 6jdLDmsIuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlESLDm7VEYDm.diag
[2025-07-27 10:00:04] -rw-r--r-- 1 boinc boinc     21702 Jul 27 10:00 stderr.txt
[2025-07-27 10:00:04] HITS file was successfully produced:
[2025-07-27 10:00:04] -rw------- 1 boinc boinc 209097408 Jul 27 09:59 shared/HITS.pool.root.1
[2025-07-27 10:00:04]  *** Contents of shared directory: ***
[2025-07-27 10:00:04] total 432440
[2025-07-27 10:00:04] -rw-r--r-- 2 boinc boinc 232356468 Jul 27 08:27 ATLAS.root_0
[2025-07-27 10:00:04] -rw-r--r-- 2 boinc boinc    542888 Jul 27 08:27 input.tar.gz
[2025-07-27 10:00:04] -rw-r--r-- 2 boinc boinc     15095 Jul 27 08:27 start_atlas.sh
[2025-07-27 10:00:04] -rw------- 1 boinc boinc 209097408 Jul 27 09:59 HITS.pool.root.1
[2025-07-27 10:00:04] -rw------- 1 boinc boinc    788480 Jul 27 10:00 result.tar.gz
10:00:05 (1169391): run_atlas exited; CPU time 15888.599724
10:00:05 (1169391): called boinc_finish(0)

</stderr_txt>
]]>

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