Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:20:09 (20951): wrapper (7.7.26015): starting
08:20:09 (20951): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 08:20:09] Arguments: --nthreads 8
[2025-07-27 08:20:09] Threads: 8
[2025-07-27 08:20:09] Checking for CVMFS
[2025-07-27 08:20:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 08:20:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 08:20:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 08:20:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 08:20:10] 2.11.2.0 748 109156 140736 148803 2 109 22188192 25165824 4353 130560 0 72516859 99.875 46583284 3351 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 08:20:10] CVMFS is ok
[2025-07-27 08:20:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 08:20:10] Checking for apptainer binary...
[2025-07-27 08:20:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 08:20:10] Running /usr/bin/apptainer --version
[2025-07-27 08:20:10] apptainer version 1.3.2-1.el7
[2025-07-27 08:20:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 08:20:12] cg-vwn379.simple-grid.lan
[2025-07-27 08:20:12] apptainer works
[2025-07-27 08:20:12] Set ATHENA_PROC_NUMBER=8
[2025-07-27 08:20:12] Set ATHENA_CORE_NUMBER=8
[2025-07-27 08:20:12] Starting ATLAS job with PandaID=6745228390
[2025-07-27 08:20:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:43:34]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:43:34] 2025-07-27 10:46:13,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:43:34] 2025-07-27 10:46:13,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:43:34] 2025-07-27 10:46:13,878 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:43:34] 2025-07-27 10:46:13,878 | INFO     | sum of square deviations: 5387301010.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,885 | INFO     | sum of deviations: -46836764776.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,885 | INFO     | mean x: 1753605157.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,885 | INFO     | mean y: 2525036.938223938
[2025-07-27 13:43:34] 2025-07-27 10:46:13,886 | INFO     | -- intersect: 15248228237.09959
[2025-07-27 13:43:34] 2025-07-27 10:46:13,886 | INFO     | intersect: 15248228237.09959
[2025-07-27 13:43:34] 2025-07-27 10:46:13,886 | INFO     | chi2: 2.7034353002636533
[2025-07-27 13:43:34] 2025-07-27 10:46:13,887 | INFO     | sum of square deviations: 5081276667.5
[2025-07-27 13:43:34] 2025-07-27 10:46:13,889 | INFO     | sum of deviations: -28540145517.99998
[2025-07-27 13:43:34] 2025-07-27 10:46:13,889 | INFO     | mean x: 1753605004.5
[2025-07-27 13:43:34] 2025-07-27 10:46:13,889 | INFO     | mean y: 2534020.5433070865
[2025-07-27 13:43:34] 2025-07-27 10:46:13,890 | INFO     | -- intersect: 9852055171.326622
[2025-07-27 13:43:34] 2025-07-27 10:46:13,890 | INFO     | intersect: 9852055171.326622
[2025-07-27 13:43:34] 2025-07-27 10:46:13,890 | INFO     | chi2: 1.9352033088574319
[2025-07-27 13:43:34] 2025-07-27 10:46:13,890 | INFO     | current chi2=1.9352033088574319 (change=28.416880971085174 %)
[2025-07-27 13:43:34] 2025-07-27 10:46:13,891 | INFO     | sum of square deviations: 4787066500.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,893 | INFO     | sum of deviations: -27740754975.000004
[2025-07-27 13:43:34] 2025-07-27 10:46:13,893 | INFO     | mean x: 1753604852.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,893 | INFO     | mean y: 2534434.951807229
[2025-07-27 13:43:34] 2025-07-27 10:46:13,894 | INFO     | -- intersect: 10164566343.700756
[2025-07-27 13:43:34] 2025-07-27 10:46:13,894 | INFO     | intersect: 10164566343.700756
[2025-07-27 13:43:34] 2025-07-27 10:46:13,894 | INFO     | chi2: 1.933543476330489
[2025-07-27 13:43:34] 2025-07-27 10:46:13,894 | INFO     | current chi2=1.933543476330489 (change=0.0857704469264669 %)
[2025-07-27 13:43:34] 2025-07-27 10:46:13,894 | INFO     | right removable region: 248
[2025-07-27 13:43:34] 2025-07-27 10:46:13,895 | INFO     | sum of square deviations: 5081276667.5
[2025-07-27 13:43:34] 2025-07-27 10:46:13,903 | INFO     | sum of deviations: -92329318576.5
[2025-07-27 13:43:34] 2025-07-27 10:46:13,904 | INFO     | mean x: 1753605309.5
[2025-07-27 13:43:34] 2025-07-27 10:46:13,904 | INFO     | mean y: 2547541.027559055
[2025-07-27 13:43:34] 2025-07-27 10:46:13,904 | INFO     | -- intersect: 31866426222.116394
[2025-07-27 13:43:34] 2025-07-27 10:46:13,904 | INFO     | intersect: 31866426222.116394
[2025-07-27 13:43:34] 2025-07-27 10:46:13,904 | INFO     | chi2: 1.0471498197543134
[2025-07-27 13:43:34] 2025-07-27 10:46:13,905 | INFO     | current chi2=1.0471498197543134 (change=61.265955961580076 %)
[2025-07-27 13:43:34] 2025-07-27 10:46:13,905 | INFO     | sum of square deviations: 4787066500.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,907 | INFO     | sum of deviations: -88626914640.00003
[2025-07-27 13:43:34] 2025-07-27 10:46:13,908 | INFO     | mean x: 1753605462.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,908 | INFO     | mean y: 2545601.6626506024
[2025-07-27 13:43:34] 2025-07-27 10:46:13,908 | INFO     | -- intersect: 32468491414.805588
[2025-07-27 13:43:34] 2025-07-27 10:46:13,908 | INFO     | intersect: 32468491414.805588
[2025-07-27 13:43:34] 2025-07-27 10:46:13,908 | INFO     | chi2: 1.0374142339776837
[2025-07-27 13:43:34] 2025-07-27 10:46:13,909 | INFO     | current chi2=1.0374142339776837 (change=0.9297223370495254 %)
[2025-07-27 13:43:34] 2025-07-27 10:46:13,909 | INFO     | left removable region: 20
[2025-07-27 13:43:34] 2025-07-27 10:46:13,909 | INFO     | sum of square deviations: 3675146117.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,911 | INFO     | sum of deviations: -54740099297.0
[2025-07-27 13:43:34] 2025-07-27 10:46:13,911 | INFO     | mean x: 1753605431.5
[2025-07-27 13:43:34] 2025-07-27 10:46:13,911 | INFO     | mean y: 2548187.5263157897
[2025-07-27 13:43:34] 2025-07-27 10:46:13,912 | INFO     | -- intersect: 26121927497.110523
[2025-07-27 13:43:34] 2025-07-27 10:46:13,912 | INFO     | intersect: 26121927497.110523
[2025-07-27 13:43:34] 2025-07-27 10:46:13,912 | INFO     | chi2: 0.23125002102621442
[2025-07-27 13:43:34] 2025-07-27 10:46:13,912 | INFO     | -- intersect: 26121927497.110523
[2025-07-27 13:43:34] 2025-07-27 10:46:13,912 | INFO     | current memory leak: -14.89 B/s (using 228 data points, chi2=0.23)
[2025-07-27 13:43:34] 2025-07-27 10:46:13,916 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | ..............................
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | . Timing measurements:
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | . get job = 0 s
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | . initial setup = 1 s
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | . payload setup = 13 s
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | . stage-in = 0 s
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | . payload execution = 15812 s
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | . stage-out = 3 s
[2025-07-27 13:43:34] 2025-07-27 10:46:13,917 | INFO     | . log creation = 1 s
[2025-07-27 13:43:34] 2025-07-27 10:46:13,918 | INFO     | ..............................
[2025-07-27 13:43:34] 2025-07-27 10:46:14,053 | INFO     | 
[2025-07-27 13:43:34] 2025-07-27 10:46:14,054 | INFO     | job summary report
[2025-07-27 13:43:34] 2025-07-27 10:46:14,054 | INFO     | --------------------------------------------------
[2025-07-27 13:43:34] 2025-07-27 10:46:14,054 | INFO     | PanDA job id: 6745228390
[2025-07-27 13:43:34] 2025-07-27 10:46:14,054 | INFO     | task id: 45743349
[2025-07-27 13:43:34] 2025-07-27 10:46:14,054 | INFO     | errors: (none)
[2025-07-27 13:43:34] 2025-07-27 10:46:14,054 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:43:34] 2025-07-27 10:46:14,054 | INFO     | pilot state: finished 
[2025-07-27 13:43:34] 2025-07-27 10:46:14,055 | INFO     | transexitcode: 0
[2025-07-27 13:43:34] 2025-07-27 10:46:14,055 | INFO     | exeerrorcode: 0
[2025-07-27 13:43:34] 2025-07-27 10:46:14,055 | INFO     | exeerrordiag: 
[2025-07-27 13:43:34] 2025-07-27 10:46:14,055 | INFO     | exitcode: 0
[2025-07-27 13:43:34] 2025-07-27 10:46:14,055 | INFO     | exitmsg: OK
[2025-07-27 13:43:34] 2025-07-27 10:46:14,055 | INFO     | cpuconsumptiontime: 61645 s
[2025-07-27 13:43:34] 2025-07-27 10:46:14,055 | INFO     | nevents: 400
[2025-07-27 13:43:34] 2025-07-27 10:46:14,055 | INFO     | neventsw: 0
[2025-07-27 13:43:34] 2025-07-27 10:46:14,056 | INFO     | pid: 31578
[2025-07-27 13:43:34] 2025-07-27 10:46:14,056 | INFO     | pgrp: 31578
[2025-07-27 13:43:34] 2025-07-27 10:46:14,056 | INFO     | corecount: 8
[2025-07-27 13:43:34] 2025-07-27 10:46:14,056 | INFO     | event service: False
[2025-07-27 13:43:34] 2025-07-27 10:46:14,056 | INFO     | sizes: {0: 2397304, 1: 2397503, 2: 2397503, 9: 2397793, 12: 2397821, 15830: 2428926, 15834: 2437980, 15918: 2438118}
[2025-07-27 13:43:34] 2025-07-27 10:46:14,056 | INFO     | --------------------------------------------------
[2025-07-27 13:43:34] 2025-07-27 10:46:14,056 | INFO     | 
[2025-07-27 13:43:34] 2025-07-27 10:46:14,056 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-07-27 13:43:34] 2025-07-27 10:46:14,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,153 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:43:34] 2025-07-27 10:46:14,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,153 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:43:34] 2025-07-27 10:46:14,153 | INFO     | job 6745228390 has completed (purged errors)
[2025-07-27 13:43:34] 2025-07-27 10:46:14,154 | INFO     | overall cleanup function is called
[2025-07-27 13:43:34] 2025-07-27 10:46:15,167 | INFO     | --- collectZombieJob: --- 10, [31578]
[2025-07-27 13:43:34] 2025-07-27 10:46:15,168 | INFO     | zombie collector waiting for pid 31578
[2025-07-27 13:43:34] 2025-07-27 10:46:15,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:43:34] 2025-07-27 10:46:15,168 | INFO     | collected zombie processes
[2025-07-27 13:43:34] 2025-07-27 10:46:15,168 | INFO     | will attempt to kill all subprocesses of pid=31578
[2025-07-27 13:43:34] 2025-07-27 10:46:15,282 | INFO     | process IDs to be killed: [31578] (in reverse order)
[2025-07-27 13:43:34] 2025-07-27 10:46:15,821 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:43:34] 2025-07-27 10:46:15,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:43:34] 2025-07-27 10:46:15,825 | INFO     | did not find any defunct processes belonging to 31578
[2025-07-27 13:43:34] 2025-07-27 10:46:15,828 | INFO     | did not find any defunct processes belonging to 31578
[2025-07-27 13:43:34] 2025-07-27 10:46:15,828 | INFO     | ready for new job
[2025-07-27 13:43:34] 2025-07-27 10:46:15,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:43:34] 2025-07-27 10:46:15,830 | INFO     | ***************************************
[2025-07-27 13:43:34] 2025-07-27 10:46:15,830 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:43:34] 2025-07-27 10:46:15,830 | INFO     | ***************************************
[2025-07-27 13:43:34] 2025-07-27 10:46:15,831 | INFO     | 
[2025-07-27 13:43:34] 2025-07-27 10:46:15,831 | INFO     | pilot is running in a VM
[2025-07-27 13:43:34] 2025-07-27 10:46:15,831 | INFO     | architecture information:
[2025-07-27 13:43:34] 2025-07-27 10:46:15,832 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:43:34] 2025-07-27 10:46:15,957 | INFO     | cat /etc/os-release:
[2025-07-27 13:43:34] NAME="CentOS Linux"
[2025-07-27 13:43:34] VERSION="7 (Core)"
[2025-07-27 13:43:34] ID="centos"
[2025-07-27 13:43:34] ID_LIKE="rhel fedora"
[2025-07-27 13:43:34] VERSION_ID="7"
[2025-07-27 13:43:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:43:34] ANSI_COLOR="0;31"
[2025-07-27 13:43:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:43:34] HOME_URL="https://www.centos.org/"
[2025-07-27 13:43:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:43:34] 
[2025-07-27 13:43:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:43:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:43:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:43:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:43:34] 
[2025-07-27 13:43:34] 2025-07-27 10:46:15,957 | INFO     | ***************************************
[2025-07-27 13:43:34] 2025-07-27 10:46:16,460 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-07-27 13:43:34] 2025-07-27 10:46:16,730 | INFO     | sufficient remaining disk space (496402169856 B)
[2025-07-27 13:43:34] 2025-07-27 10:46:16,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:43:34] 2025-07-27 10:46:16,731 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:43:34] 2025-07-27 10:46:16,731 | INFO     | update_server=False
[2025-07-27 13:43:34] 2025-07-27 10:46:16,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:43:34] 2025-07-27 10:46:16,902 | INFO     | all data control threads have been joined
[2025-07-27 13:43:34] 2025-07-27 10:46:16,985 | INFO     | all job control threads have been joined
[2025-07-27 13:43:34] 2025-07-27 10:46:17,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:43:34] 2025-07-27 10:46:17,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:43:34] 2025-07-27 10:46:17,463 | INFO     | aborting loop
[2025-07-27 13:43:34] 2025-07-27 10:46:17,736 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:17,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:17,908 | INFO     | [data] control thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:17,991 | INFO     | [job] control thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:18,134 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:18,178 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:18,207 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:18,218 | INFO     | all payload control threads have been joined
[2025-07-27 13:43:34] 2025-07-27 10:46:18,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:43:34] 2025-07-27 10:46:18,278 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:18,469 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:18,512 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:18,541 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:19,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:43:34] 2025-07-27 10:46:19,123 | INFO     | [job] validate thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:19,224 | INFO     | [payload] control thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:20,074 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:20,231 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:21,297 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:43:34] 2025-07-27 10:46:23,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117274011456)>', '<ExcThread(monitor, started 140116823615232)>']
[2025-07-27 13:43:34] 2025-07-27 10:46:28,113 | INFO     | all workflow threads have been joined
[2025-07-27 13:43:34] 2025-07-27 10:46:28,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:43:34] 2025-07-27 10:46:28,114 | INFO     | traces error code: 0
[2025-07-27 13:43:34] 2025-07-27 10:46:28,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:43:34] 2025-07-27 10:46:45,794 | INFO     | PID=25000 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 13:43:34] 2025-07-27 10:46:45,795 | INFO     | .. there are 9 such processes running
[2025-07-27 13:43:34] 2025-07-27 10:46:45,795 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:43:34] 2025-07-27 10:46:45,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:43:34] 2025-07-27 10:46:45,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:43:34] 2025-07-27 10:46:45,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:43:34] 2025-07-27 10:46:45,795 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 13:43:34] 2025-07-27 10:46:45,795 | INFO     | [monitor] control thread has ended
[2025-07-27 13:43:34] 2025-07-27 10:46:46,275 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:43:34] 2025-07-27 10:46:46,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:43:34] 2025-07-27 10:46:46,426 [wrapper] pilotpid: 25000
[2025-07-27 13:43:34] 2025-07-27 10:46:46,529 [wrapper] Pilot exit status: 0
[2025-07-27 13:43:34] 2025-07-27 10:46:47,004 [wrapper] pandaids: 6745228390
[2025-07-27 13:43:34] 2025-07-27 10:46:47,507 [wrapper] cleanup supervisor_pilot  8638 25001
[2025-07-27 13:43:34] 2025-07-27 10:46:47,572 [wrapper] Test setup, not cleaning
[2025-07-27 13:43:34] 2025-07-27 10:46:47,649 [wrapper] apfmon messages muted
[2025-07-27 13:43:34] 2025-07-27 10:46:47,743 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:43:34] 2025-07-27 10:46:47,843 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:43:34]  *** Error codes and diagnostics ***
[2025-07-27 13:43:34]     "exeErrorCode": 0,
[2025-07-27 13:43:34]     "exeErrorDiag": "",
[2025-07-27 13:43:34]     "pilotErrorCode": 0,
[2025-07-27 13:43:34]     "pilotErrorDiag": "",
[2025-07-27 13:43:34]  *** Listing of results directory ***
[2025-07-27 13:43:34] total 431984
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc    530466 Jul 26 15:41 pilot3.tar.gz
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc      5112 Jul 26 15:47 queuedata.json
[2025-07-27 13:43:34] -rwx------. 1 boinc boinc     36292 Jul 26 15:48 runpilot2-wrapper.sh
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc       100 Jul 27 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:43:34] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 08:20 run_atlas
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc       105 Jul 27 08:20 job.xml
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc      6392 Jul 27 08:20 init_data.xml
[2025-07-27 13:43:34] -rw-r--r--. 2 boinc boinc 227227657 Jul 27 08:20 EVNT.45743347._002216.pool.root.1
[2025-07-27 13:43:34] -rw-r--r--. 2 boinc boinc     15095 Jul 27 08:20 start_atlas.sh
[2025-07-27 13:43:34] drwxrwx--x. 2 boinc boinc        68 Jul 27 08:20 shared
[2025-07-27 13:43:34] -rw-r--r--. 2 boinc boinc    542896 Jul 27 08:20 input.tar.gz
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc         0 Jul 27 08:20 boinc_lockfile
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc      2563 Jul 27 08:20 pandaJob.out
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc    980125 Jul 27 08:20 agis_schedconf.cvmfs.json
[2025-07-27 13:43:34] drwx------. 4 boinc boinc      4096 Jul 27 08:20 pilot3
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc 207723529 Jul 27 12:43 HITS.45743349._038844.pool.root.1
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc       531 Jul 27 12:43 boinc_task_state.xml
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc      1018 Jul 27 12:44 memory_monitor_summary.json
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc   1593052 Jul 27 12:44 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc    404832 Jul 27 12:44 log.45743349._038844.job.log.tgz.1
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc        95 Jul 27 12:46 pilot_heartbeat.json
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc      7781 Jul 27 12:46 heartbeat.json
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc       890 Jul 27 12:46 pilotlog.txt
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc   1363539 Jul 27 12:46 log.45743349._038844.job.log.1
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc       357 Jul 27 12:46 output.list
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc       620 Jul 27 12:46 runtime_log
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc   1792000 Jul 27 12:46 result.tar.gz
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc      8660 Jul 27 12:46 runtime_log.err
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc       657 Jul 27 12:46 dgtNDmQRuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSHSLDm7TQsSo.diag
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc      8192 Jul 27 13:43 boinc_mmap_file
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc        28 Jul 27 13:43 wrapper_checkpoint.txt
[2025-07-27 13:43:34] -rw-r--r--. 1 boinc boinc     20561 Jul 27 13:43 stderr.txt
[2025-07-27 13:43:34] HITS file was successfully produced:
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc 207723529 Jul 27 12:43 shared/HITS.pool.root.1
[2025-07-27 13:43:34]  *** Contents of shared directory: ***
[2025-07-27 13:43:34] total 427060
[2025-07-27 13:43:34] -rw-r--r--. 2 boinc boinc 227227657 Jul 27 08:20 ATLAS.root_0
[2025-07-27 13:43:34] -rw-r--r--. 2 boinc boinc     15095 Jul 27 08:20 start_atlas.sh
[2025-07-27 13:43:34] -rw-r--r--. 2 boinc boinc    542896 Jul 27 08:20 input.tar.gz
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc 207723529 Jul 27 12:43 HITS.pool.root.1
[2025-07-27 13:43:34] -rw-------. 1 boinc boinc   1792000 Jul 27 12:46 result.tar.gz
13:43:36 (20951): run_atlas exited; CPU time 61846.102160
13:43:36 (20951): called boinc_finish(0)

</stderr_txt>
]]>

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