Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:13:43 (2301910): wrapper (7.7.26015): starting
16:13:43 (2301910): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 16:13:43] Arguments: --nthreads 12
[2025-07-26 16:13:43] Threads: 12
[2025-07-26 16:13:43] Checking for CVMFS
[2025-07-26 16:13:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:13:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:13:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:13:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:13:43] 2.12.6.0 2794239 17391 314992 148787 3 249 36364168 40960000 10019 16776704 1 43552211 99.782 41847888 23254 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 16:13:43] CVMFS is ok
[2025-07-26 16:13:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:13:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:13:43] Further information can be found at the LHC@home message board.
[2025-07-26 16:13:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:13:43] Checking for apptainer binary...
[2025-07-26 16:13:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:13:43] Running /usr/bin/apptainer --version
[2025-07-26 16:13:43] apptainer version 1.4.1-1.el9
[2025-07-26 16:13:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:13:43] c6-8-12-4.aglt2.org
[2025-07-26 16:13:43] apptainer works
[2025-07-26 16:13:43] Set ATHENA_PROC_NUMBER=12
[2025-07-26 16:13:43] Set ATHENA_CORE_NUMBER=12
[2025-07-26 16:13:43] Starting ATLAS job with PandaID=6745227585
[2025-07-26 16:13:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 17:22:22]  *** The last 200 lines of the pilot log: ***
[2025-07-26 17:22:22]  protocol_id=None
[2025-07-26 17:22:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 17:22:22]  replicas=None
[2025-07-26 17:22:22]  scope=mc23_13p6TeV
[2025-07-26 17:22:22]  status=None
[2025-07-26 17:22:22]  status_code=0
[2025-07-26 17:22:22]  storage_token=
[2025-07-26 17:22:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745227585/log.45743349._038587.job.log.tgz.1
[2025-07-26 17:22:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/cc/log.45743349._038587.job.log.tgz.1
[2025-07-26 17:22:22]  workdir=None
[2025-07-26 17:22:22] ]
[2025-07-26 17:22:22] 2025-07-26 21:21:47,004 | INFO     | transferring file log.45743349._038587.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745227585/log.45743349._038587.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 17:22:22] 2025-07-26 21:21:47,005 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745227585/log.45743349._038587.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._038587.job
[2025-07-26 17:22:22] 2025-07-26 21:21:47,018 | INFO     | adding to output.list: log.45743349._038587.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/cc/log.45743349._038587.job.log.tg
[2025-07-26 17:22:22] 2025-07-26 21:21:47,019 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 17:22:22] 2025-07-26 21:21:47,019 | INFO     | summary of transferred files:
[2025-07-26 17:22:22] 2025-07-26 21:21:47,019 | INFO     |  -- lfn=log.45743349._038587.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 17:22:22] 2025-07-26 21:21:47,019 | INFO     | stage-out finished correctly
[2025-07-26 17:22:22] 2025-07-26 21:21:47,064 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 17:22:22] 2025-07-26 21:21:47,128 | INFO     | job 6745227585 has state=finished
[2025-07-26 17:22:22] 2025-07-26 21:21:47,129 | INFO     | preparing for final server update for job 6745227585 in state='finished'
[2025-07-26 17:22:22] 2025-07-26 21:21:47,129 | INFO     | this job has now completed (state=finished)
[2025-07-26 17:22:22] 2025-07-26 21:21:47,129 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 17:22:22] 2025-07-26 21:21:47,130 | INFO     | log transfer has been attempted: DONE
[2025-07-26 17:22:22] 2025-07-26 21:21:47,130 | INFO     | job 6745227585 has finished - writing final server update
[2025-07-26 17:22:22] 2025-07-26 21:21:47,130 | INFO     | total number of processed events: 400 (read)
[2025-07-26 17:22:22] 2025-07-26 21:21:47,131 | INFO     | executing command: lscpu
[2025-07-26 17:22:22] 2025-07-26 21:21:47,180 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 17:22:22] 2025-07-26 21:21:47,198 | WARNING  | process 2313774 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 17:22:22] 2025-07-26 21:21:47,198 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745227585/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 17:22:22] 2025-07-26 21:21:47,382 | INFO     | number of running child processes to parent process 2313774: 1
[2025-07-26 17:22:22] 2025-07-26 21:21:47,382 | INFO     | maximum number of monitored processes: 6
[2025-07-26 17:22:22] 2025-07-26 21:21:49,884 | INFO     | monitor loop #305: job 0:6745227585 is in state 'finished'
[2025-07-26 17:22:22] 2025-07-26 21:21:49,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:22:22] 2025-07-26 21:21:50,026 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 17:22:22] 2025-07-26 21:21:50,032 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2940.321767857143
[2025-07-26 17:22:22] 2025-07-26 21:21:50,038 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745227585/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 17:22:22] 2025-07-26 21:21:50,039 | INFO     | extracted standard info from prmon json
[2025-07-26 17:22:22] 2025-07-26 21:21:50,039 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 17:22:22] 2025-07-26 21:21:50,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 17:22:22] 2025-07-26 21:21:50,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 17:22:22] 2025-07-26 21:21:50,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 17:22:22] 2025-07-26 21:21:50,041 | INFO     | fitting pss+swap vs Time
[2025-07-26 17:22:22] 2025-07-26 21:21:50,041 | INFO     | sum of square deviations: 66959395.0
[2025-07-26 17:22:22] 2025-07-26 21:21:50,041 | INFO     | sum of deviations: 1773832054.0
[2025-07-26 17:22:22] 2025-07-26 21:21:50,041 | INFO     | mean x: 1753562969.5
[2025-07-26 17:22:22] 2025-07-26 21:21:50,041 | INFO     | mean y: 2495949.8666666667
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | -- intersect: -46451421443.002914
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | intersect: -46451421443.002914
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | chi2: 0.03775803353008904
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | -- intersect: -46451421443.002914
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | current memory leak: 26.49 B/s (using 60 data points, chi2=0.04)
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | could have reported an average CPU frequency of 2790 MHz (6 samples)
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | ..............................
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | . Timing measurements:
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | . get job = 0 s
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | . initial setup = 3 s
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | . payload setup = 7 s
[2025-07-26 17:22:22] 2025-07-26 21:21:50,042 | INFO     | . stage-in = 0 s
[2025-07-26 17:22:22] 2025-07-26 21:21:50,043 | INFO     | . payload execution = 4042 s
[2025-07-26 17:22:22] 2025-07-26 21:21:50,043 | INFO     | . stage-out = 0 s
[2025-07-26 17:22:22] 2025-07-26 21:21:50,043 | INFO     | . log creation = 0 s
[2025-07-26 17:22:22] 2025-07-26 21:21:50,043 | INFO     | ..............................
[2025-07-26 17:22:22] 2025-07-26 21:21:50,108 | INFO     | 
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | job summary report
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | --------------------------------------------------
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | PanDA job id: 6745227585
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | task id: 45743349
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | errors: (none)
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | pilot state: finished 
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | transexitcode: 0
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | exeerrorcode: 0
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | exeerrordiag: 
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | exitcode: 0
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | exitmsg: OK
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | cpuconsumptiontime: 43522 s
[2025-07-26 17:22:22] 2025-07-26 21:21:50,109 | INFO     | nevents: 400
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | neventsw: 0
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | pid: 2313774
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | pgrp: 2313774
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | corecount: 12
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | event service: False
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 4053: 2423636, 4054: 2432690, 4057: 2432828}
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | --------------------------------------------------
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | 
[2025-07-26 17:22:22] 2025-07-26 21:21:50,110 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | job 6745227585 has completed (purged errors)
[2025-07-26 17:22:22] 2025-07-26 21:21:50,127 | INFO     | overall cleanup function is called
[2025-07-26 17:22:22] 2025-07-26 21:21:51,133 | INFO     | --- collectZombieJob: --- 10, [2313774]
[2025-07-26 17:22:22] 2025-07-26 21:21:51,134 | INFO     | zombie collector waiting for pid 2313774
[2025-07-26 17:22:22] 2025-07-26 21:21:51,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 17:22:22] 2025-07-26 21:21:51,134 | INFO     | collected zombie processes
[2025-07-26 17:22:22] 2025-07-26 21:21:51,134 | INFO     | will attempt to kill all subprocesses of pid=2313774
[2025-07-26 17:22:22] 2025-07-26 21:21:51,342 | INFO     | process IDs to be killed: [2313774] (in reverse order)
[2025-07-26 17:22:22] 2025-07-26 21:21:51,408 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 17:22:22] 2025-07-26 21:21:51,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 17:22:22] 2025-07-26 21:21:51,415 | INFO     | did not find any defunct processes belonging to 2313774
[2025-07-26 17:22:22] 2025-07-26 21:21:51,421 | INFO     | did not find any defunct processes belonging to 2313774
[2025-07-26 17:22:22] 2025-07-26 21:21:51,421 | INFO     | ready for new job
[2025-07-26 17:22:22] 2025-07-26 21:21:51,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 17:22:22] 2025-07-26 21:21:51,422 | INFO     | ***************************************
[2025-07-26 17:22:22] 2025-07-26 21:21:51,423 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 17:22:22] 2025-07-26 21:21:51,423 | INFO     | ***************************************
[2025-07-26 17:22:22] 2025-07-26 21:21:51,423 | INFO     | 
[2025-07-26 17:22:22] 2025-07-26 21:21:51,437 | INFO     | architecture information:
[2025-07-26 17:22:22] 2025-07-26 21:21:51,438 | INFO     | executing command: cat /etc/os-release
[2025-07-26 17:22:22] 2025-07-26 21:21:51,446 | INFO     | cat /etc/os-release:
[2025-07-26 17:22:22] NAME="CentOS Linux"
[2025-07-26 17:22:22] VERSION="7 (Core)"
[2025-07-26 17:22:22] ID="centos"
[2025-07-26 17:22:22] ID_LIKE="rhel fedora"
[2025-07-26 17:22:22] VERSION_ID="7"
[2025-07-26 17:22:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 17:22:22] ANSI_COLOR="0;31"
[2025-07-26 17:22:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 17:22:22] HOME_URL="https://www.centos.org/"
[2025-07-26 17:22:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 17:22:22] 
[2025-07-26 17:22:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 17:22:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 17:22:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 17:22:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 17:22:22] 
[2025-07-26 17:22:22] 2025-07-26 21:21:51,447 | INFO     | ***************************************
[2025-07-26 17:22:22] 2025-07-26 21:21:51,949 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 17:22:22] 2025-07-26 21:21:51,963 | INFO     | sufficient remaining disk space (56209965056 B)
[2025-07-26 17:22:22] 2025-07-26 21:21:51,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 17:22:22] 2025-07-26 21:21:51,963 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 17:22:22] 2025-07-26 21:21:51,963 | INFO     | update_server=False
[2025-07-26 17:22:22] 2025-07-26 21:21:51,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 17:22:22] 2025-07-26 21:21:51,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:22:22] 2025-07-26 21:21:51,987 | INFO     | all data control threads have been joined
[2025-07-26 17:22:22] 2025-07-26 21:21:52,387 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 17:22:22] 2025-07-26 21:21:52,388 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 17:22:22] 2025-07-26 21:21:52,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:22:22] 2025-07-26 21:21:52,388 | INFO     | will abort loop
[2025-07-26 17:22:22] 2025-07-26 21:21:52,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 17:22:22] 2025-07-26 21:21:52,968 | INFO     | [job] queue monitor thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:52,969 | INFO     | [job] retrieve thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:52,992 | INFO     | [data] control thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:53,036 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:53,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 17:22:22] 2025-07-26 21:21:53,361 | INFO     | all payload control threads have been joined
[2025-07-26 17:22:22] 2025-07-26 21:21:53,392 | INFO     | [job] job monitor thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:53,451 | INFO     | all job control threads have been joined
[2025-07-26 17:22:22] 2025-07-26 21:21:53,534 | INFO     | [payload] validate_post thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:53,638 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:53,639 | INFO     | [job] validate thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:53,723 | INFO     | [payload] failed_post thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:53,853 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:54,141 | INFO     | [data] copytool_in thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:54,366 | INFO     | [payload] control thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:54,456 | INFO     | [job] control thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:54,580 | INFO     | [data] copytool_out thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:21:57,139 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:22:02,521 | INFO     | job.realtimelogging is not enabled
[2025-07-26 17:22:22] 2025-07-26 21:22:03,527 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 17:22:22] 2025-07-26 21:22:04,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662182172480)>', '<ExcThread(monitor, started 140661688874752)>']
[2025-07-26 17:22:22] 2025-07-26 21:22:09,666 | INFO     | all workflow threads have been joined
[2025-07-26 17:22:22] 2025-07-26 21:22:09,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 17:22:22] 2025-07-26 21:22:09,666 | INFO     | traces error code: 0
[2025-07-26 17:22:22] 2025-07-26 21:22:09,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 17:22:22] 2025-07-26 21:22:22,162 | INFO     | PID=2305933 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 17:22:22] 2025-07-26 21:22:22,162 | INFO     | .. there are 11 such processes running
[2025-07-26 17:22:22] 2025-07-26 21:22:22,163 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 17:22:22] 2025-07-26 21:22:22,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 17:22:22] 2025-07-26 21:22:22,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 17:22:22] 2025-07-26 21:22:22,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 17:22:22] 2025-07-26 21:22:22,163 | INFO     | [monitor] control thread has ended
[2025-07-26 17:22:22] 2025-07-26 21:22:22,291 [wrapper] ==== pilot stdout END ====
[2025-07-26 17:22:22] 2025-07-26 21:22:22,294 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 17:22:22] 2025-07-26 21:22:22,295 [wrapper] pilotpid: 2305933
[2025-07-26 17:22:22] 2025-07-26 21:22:22,297 [wrapper] Pilot exit status: 0
[2025-07-26 17:22:22] 2025-07-26 21:22:22,303 [wrapper] pandaids: 6745227585
[2025-07-26 17:22:22] 2025-07-26 21:22:22,339 [wrapper] cleanup supervisor_pilot 2430568 2305934
[2025-07-26 17:22:22] 2025-07-26 21:22:22,341 [wrapper] Test setup, not cleaning
[2025-07-26 17:22:22] 2025-07-26 21:22:22,343 [wrapper] apfmon messages muted
[2025-07-26 17:22:22] 2025-07-26 21:22:22,344 [wrapper] ==== wrapper stdout END ====
[2025-07-26 17:22:22] 2025-07-26 21:22:22,346 [wrapper] ==== wrapper stderr END ====
[2025-07-26 17:22:22]  *** Error codes and diagnostics ***
[2025-07-26 17:22:22]     "exeErrorCode": 0,
[2025-07-26 17:22:22]     "exeErrorDiag": "",
[2025-07-26 17:22:22]     "pilotErrorCode": 0,
[2025-07-26 17:22:22]     "pilotErrorDiag": "",
[2025-07-26 17:22:22]  *** Listing of results directory ***
[2025-07-26 17:22:22] total 432708
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 09:10 pilot3.tar.gz
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 09:37 queuedata.json
[2025-07-26 17:22:22] -rwx------. 1 boincer umatlas     36292 Jul 26 09:38 runpilot2-wrapper.sh
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas       100 Jul 26 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 17:22:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 16:13 run_atlas
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas       105 Jul 26 16:13 job.xml
[2025-07-26 17:22:22] -rw-r--r--. 2 boincer umatlas 230810454 Jul 26 16:13 EVNT.45743347._002206.pool.root.1
[2025-07-26 17:22:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:13 start_atlas.sh
[2025-07-26 17:22:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 16:13 shared
[2025-07-26 17:22:22] -rw-r--r--. 2 boincer umatlas    542903 Jul 26 16:13 input.tar.gz
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas         0 Jul 26 16:13 boinc_lockfile
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 16:13 pandaJob.out
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas    980125 Jul 26 16:13 agis_schedconf.cvmfs.json
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas   1593052 Jul 26 16:13 agis_ddmendpoints.agis.ALL.json
[2025-07-26 17:22:22] drwx------. 4 boincer umatlas      4096 Jul 26 16:13 pilot3
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas 206866518 Jul 26 17:21 HITS.45743349._038587.pool.root.1
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas      6839 Jul 26 17:21 init_data.xml
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas       529 Jul 26 17:21 boinc_task_state.xml
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas      1032 Jul 26 17:21 memory_monitor_summary.json
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas    354661 Jul 26 17:21 log.45743349._038587.job.log.tgz.1
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas      7821 Jul 26 17:21 heartbeat.json
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas        27 Jul 26 17:22 wrapper_checkpoint.txt
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas       823 Jul 26 17:22 pilotlog.txt
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas        95 Jul 26 17:22 pilot_heartbeat.json
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 17:22 boinc_mmap_file
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas    415759 Jul 26 17:22 log.45743349._038587.job.log.1
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas       357 Jul 26 17:22 output.list
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas       620 Jul 26 17:22 runtime_log
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas    788480 Jul 26 17:22 result.tar.gz
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 17:22 runtime_log.err
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas       655 Jul 26 17:22 Ah7MDmoHuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbp0KDmw47tdn.diag
[2025-07-26 17:22:22] -rw-r--r--. 1 boincer umatlas     21792 Jul 26 17:22 stderr.txt
[2025-07-26 17:22:22] HITS file was successfully produced:
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas 206866518 Jul 26 17:21 shared/HITS.pool.root.1
[2025-07-26 17:22:22]  *** Contents of shared directory: ***
[2025-07-26 17:22:22] total 428748
[2025-07-26 17:22:22] -rw-r--r--. 2 boincer umatlas 230810454 Jul 26 16:13 ATLAS.root_0
[2025-07-26 17:22:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:13 start_atlas.sh
[2025-07-26 17:22:22] -rw-r--r--. 2 boincer umatlas    542903 Jul 26 16:13 input.tar.gz
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas 206866518 Jul 26 17:21 HITS.pool.root.1
[2025-07-26 17:22:22] -rw-------. 1 boincer umatlas    788480 Jul 26 17:22 result.tar.gz
17:22:23 (2301910): run_atlas exited; CPU time 43578.657232
17:22:23 (2301910): called boinc_finish(0)

</stderr_txt>
]]>

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