Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:55:45 (2053798): wrapper (7.7.26015): starting
17:55:45 (2053798): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 17:55:45] Arguments: --nthreads 12
[2025-07-29 17:55:45] Threads: 12
[2025-07-29 17:55:45] Checking for CVMFS
[2025-07-29 17:55:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 17:55:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 17:55:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 17:55:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 17:55:49] 2.13.1.0 2237 6548 62452 148894 3 188 2227310 4096000 912 130560 0 5253355 99.991 230935 215 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-29 17:55:49] CVMFS is ok
[2025-07-29 17:55:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 17:55:49] Checking for apptainer binary...
[2025-07-29 17:55:49] apptainer is not installed, using version from CVMFS
[2025-07-29 17:55:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 17:55:50] g3250
[2025-07-29 17:55:50] apptainer works
[2025-07-29 17:55:50] Set ATHENA_PROC_NUMBER=12
[2025-07-29 17:55:50] Set ATHENA_CORE_NUMBER=12
[2025-07-29 17:55:50] Starting ATLAS job with PandaID=6745227574
[2025-07-29 17:55:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 21:19:56]  *** The last 200 lines of the pilot log: ***
[2025-07-29 21:19:56] 2025-07-29 21:19:18,442 | INFO     | PID=2057418 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 21:19:56] 2025-07-29 21:19:18,442 | INFO     | .. there are 2 such processes running
[2025-07-29 21:19:56] 2025-07-29 21:19:20,167 | INFO     | monitor loop #922: job 0:6745227574 is in state 'finished'
[2025-07-29 21:19:56] 2025-07-29 21:19:20,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,355 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-29 21:19:56] 2025-07-29 21:19:22,357 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3263.823375
[2025-07-29 21:19:56] 2025-07-29 21:19:22,359 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745227574/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,363 | INFO     | extracted standard info from prmon json
[2025-07-29 21:19:56] 2025-07-29 21:19:22,363 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 21:19:56] 2025-07-29 21:19:22,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 21:19:56] 2025-07-29 21:19:22,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 21:19:56] 2025-07-29 21:19:22,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 21:19:56] 2025-07-29 21:19:22,371 | INFO     | fitting pss+swap vs Time
[2025-07-29 21:19:56] 2025-07-29 21:19:22,371 | INFO     | sum of square deviations: 2299168690.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,372 | INFO     | sum of deviations: 75048991069.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,373 | INFO     | mean x: 1753817934.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,373 | INFO     | mean y: 2604960.7846153844
[2025-07-29 21:19:56] 2025-07-29 21:19:22,373 | INFO     | -- intersect: -57245158997.50852
[2025-07-29 21:19:56] 2025-07-29 21:19:22,373 | INFO     | intersect: -57245158997.50852
[2025-07-29 21:19:56] 2025-07-29 21:19:22,373 | INFO     | chi2: 4.206835670820846
[2025-07-29 21:19:56] 2025-07-29 21:19:22,373 | INFO     | sum of square deviations: 2126802667.5
[2025-07-29 21:19:56] 2025-07-29 21:19:22,374 | INFO     | sum of deviations: 87341750719.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,375 | INFO     | mean x: 1753817781.5
[2025-07-29 21:19:56] 2025-07-29 21:19:22,375 | INFO     | mean y: 2615572.2842105264
[2025-07-29 21:19:56] 2025-07-29 21:19:22,379 | INFO     | -- intersect: -72021704229.0368
[2025-07-29 21:19:56] 2025-07-29 21:19:22,379 | INFO     | intersect: -72021704229.0368
[2025-07-29 21:19:56] 2025-07-29 21:19:22,379 | INFO     | chi2: 3.38928533185834
[2025-07-29 21:19:56] 2025-07-29 21:19:22,379 | INFO     | current chi2=3.38928533185834 (change=19.433854871801632 %)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,380 | INFO     | right removable region: 189
[2025-07-29 21:19:56] 2025-07-29 21:19:22,380 | INFO     | sum of square deviations: 2126802667.5
[2025-07-29 21:19:56] 2025-07-29 21:19:22,381 | INFO     | sum of deviations: 17741320062.5
[2025-07-29 21:19:56] 2025-07-29 21:19:22,381 | INFO     | mean x: 1753818086.5
[2025-07-29 21:19:56] 2025-07-29 21:19:22,381 | INFO     | mean y: 2655508.805263158
[2025-07-29 21:19:56] 2025-07-29 21:19:22,381 | INFO     | -- intersect: -14627309216.870356
[2025-07-29 21:19:56] 2025-07-29 21:19:22,381 | INFO     | intersect: -14627309216.870356
[2025-07-29 21:19:56] 2025-07-29 21:19:22,382 | INFO     | chi2: 1.229541607413462
[2025-07-29 21:19:56] 2025-07-29 21:19:22,382 | INFO     | current chi2=1.229541607413462 (change=70.77276833174824 %)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,382 | INFO     | sum of square deviations: 1963274020.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,387 | INFO     | sum of deviations: -1414955024.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,387 | INFO     | mean x: 1753818239.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,387 | INFO     | mean y: 2673336.756756757
[2025-07-29 21:19:56] 2025-07-29 21:19:22,387 | INFO     | -- intersect: 1266671078.883392
[2025-07-29 21:19:56] 2025-07-29 21:19:22,387 | INFO     | intersect: 1266671078.883392
[2025-07-29 21:19:56] 2025-07-29 21:19:22,388 | INFO     | chi2: 0.9284909698986629
[2025-07-29 21:19:56] 2025-07-29 21:19:22,388 | INFO     | current chi2=0.9284909698986629 (change=24.48478650089015 %)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,388 | INFO     | left removable region: 20
[2025-07-29 21:19:56] 2025-07-29 21:19:22,388 | INFO     | sum of square deviations: 1496660620.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,389 | INFO     | sum of deviations: 5890443345.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,389 | INFO     | mean x: 1753818361.0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,389 | INFO     | mean y: 2692836.7337278104
[2025-07-29 21:19:56] 2025-07-29 21:19:22,389 | INFO     | -- intersect: -6899852439.623753
[2025-07-29 21:19:56] 2025-07-29 21:19:22,390 | INFO     | intersect: -6899852439.623753
[2025-07-29 21:19:56] 2025-07-29 21:19:22,390 | INFO     | chi2: 0.00237604909208233
[2025-07-29 21:19:56] 2025-07-29 21:19:22,390 | INFO     | -- intersect: -6899852439.623753
[2025-07-29 21:19:56] 2025-07-29 21:19:22,390 | INFO     | current memory leak: 3.94 B/s (using 169 data points, chi2=0.00)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,390 | INFO     | could have reported an average CPU frequency of 3263 MHz (10 samples)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,391 | INFO     | ..............................
[2025-07-29 21:19:56] 2025-07-29 21:19:22,391 | INFO     | . Timing measurements:
[2025-07-29 21:19:56] 2025-07-29 21:19:22,391 | INFO     | . get job = 0 s
[2025-07-29 21:19:56] 2025-07-29 21:19:22,395 | INFO     | . initial setup = 4 s
[2025-07-29 21:19:56] 2025-07-29 21:19:22,395 | INFO     | . payload setup = 72 s
[2025-07-29 21:19:56] 2025-07-29 21:19:22,395 | INFO     | . stage-in = 0 s
[2025-07-29 21:19:56] 2025-07-29 21:19:22,395 | INFO     | . payload execution = 11923 s
[2025-07-29 21:19:56] 2025-07-29 21:19:22,395 | INFO     | . stage-out = 2 s
[2025-07-29 21:19:56] 2025-07-29 21:19:22,395 | INFO     | . log creation = 0 s
[2025-07-29 21:19:56] 2025-07-29 21:19:22,395 | INFO     | ..............................
[2025-07-29 21:19:56] 2025-07-29 21:19:22,592 | INFO     | 
[2025-07-29 21:19:56] 2025-07-29 21:19:22,592 | INFO     | job summary report
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | --------------------------------------------------
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | PanDA job id: 6745227574
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | task id: 45743349
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | errors: (none)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | pilot state: finished 
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | transexitcode: 0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | exeerrorcode: 0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | exeerrordiag: 
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | exitcode: 0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,593 | INFO     | exitmsg: OK
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | cpuconsumptiontime: 48802 s
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | nevents: 400
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | neventsw: 0
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | pid: 2065892
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | pgrp: 2065892
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | corecount: 12
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | event service: False
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | sizes: {0: 2391760, 1: 2391959, 12: 2391959, 23: 2391987, 34: 2392015, 41: 2392305, 44: 2392461, 11998: 2421955, 11999: 2421954, 12003: 2431054, 12006: 2431110, 12
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | --------------------------------------------------
[2025-07-29 21:19:56] 2025-07-29 21:19:22,594 | INFO     | 
[2025-07-29 21:19:56] 2025-07-29 21:19:22,595 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-29 21:19:56] 2025-07-29 21:19:22,635 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 21:19:56] 2025-07-29 21:19:22,637 | INFO     | job 6745227574 has completed (purged errors)
[2025-07-29 21:19:56] 2025-07-29 21:19:22,638 | INFO     | overall cleanup function is called
[2025-07-29 21:19:56] 2025-07-29 21:19:23,643 | INFO     | --- collectZombieJob: --- 10, [2065892]
[2025-07-29 21:19:56] 2025-07-29 21:19:23,643 | INFO     | zombie collector waiting for pid 2065892
[2025-07-29 21:19:56] 2025-07-29 21:19:23,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 21:19:56] 2025-07-29 21:19:23,643 | INFO     | collected zombie processes
[2025-07-29 21:19:56] 2025-07-29 21:19:23,643 | INFO     | will attempt to kill all subprocesses of pid=2065892
[2025-07-29 21:19:56] 2025-07-29 21:19:23,779 | INFO     | process IDs to be killed: [2065892] (in reverse order)
[2025-07-29 21:19:56] 2025-07-29 21:19:23,836 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 21:19:56] 2025-07-29 21:19:23,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 21:19:56] 2025-07-29 21:19:23,838 | INFO     | did not find any defunct processes belonging to 2065892
[2025-07-29 21:19:56] 2025-07-29 21:19:23,843 | INFO     | did not find any defunct processes belonging to 2065892
[2025-07-29 21:19:56] 2025-07-29 21:19:23,843 | INFO     | ready for new job
[2025-07-29 21:19:56] 2025-07-29 21:19:23,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 21:19:56] 2025-07-29 21:19:23,845 | INFO     | ***************************************
[2025-07-29 21:19:56] 2025-07-29 21:19:23,845 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 21:19:56] 2025-07-29 21:19:23,845 | INFO     | ***************************************
[2025-07-29 21:19:56] 2025-07-29 21:19:23,845 | INFO     | 
[2025-07-29 21:19:56] 2025-07-29 21:19:23,863 | INFO     | architecture information:
[2025-07-29 21:19:56] 2025-07-29 21:19:23,875 | INFO     | executing command: cat /etc/os-release
[2025-07-29 21:19:56] 2025-07-29 21:19:23,983 | INFO     | cat /etc/os-release:
[2025-07-29 21:19:56] NAME="CentOS Linux"
[2025-07-29 21:19:56] VERSION="7 (Core)"
[2025-07-29 21:19:56] ID="centos"
[2025-07-29 21:19:56] ID_LIKE="rhel fedora"
[2025-07-29 21:19:56] VERSION_ID="7"
[2025-07-29 21:19:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 21:19:56] ANSI_COLOR="0;31"
[2025-07-29 21:19:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 21:19:56] HOME_URL="https://www.centos.org/"
[2025-07-29 21:19:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 21:19:56] 
[2025-07-29 21:19:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 21:19:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 21:19:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 21:19:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 21:19:56] 
[2025-07-29 21:19:56] 2025-07-29 21:19:23,983 | INFO     | ***************************************
[2025-07-29 21:19:56] 2025-07-29 21:19:24,487 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-29 21:19:56] 2025-07-29 21:19:24,515 | INFO     | sufficient remaining disk space (30387732480 B)
[2025-07-29 21:19:56] 2025-07-29 21:19:24,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 21:19:56] 2025-07-29 21:19:24,516 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 21:19:56] 2025-07-29 21:19:24,516 | INFO     | update_server=False
[2025-07-29 21:19:56] 2025-07-29 21:19:24,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 21:19:56] 2025-07-29 21:19:24,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 21:19:56] 2025-07-29 21:19:24,516 | INFO     | aborting loop
[2025-07-29 21:19:56] 2025-07-29 21:19:24,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 21:19:56] 2025-07-29 21:19:24,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 21:19:56] 2025-07-29 21:19:24,955 | INFO     | all data control threads have been joined
[2025-07-29 21:19:56] 2025-07-29 21:19:25,323 | INFO     | all payload control threads have been joined
[2025-07-29 21:19:56] 2025-07-29 21:19:25,523 | INFO     | [job] queue monitor thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:25,527 | INFO     | [job] retrieve thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:25,527 | INFO     | [job] job monitor thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:25,623 | INFO     | all job control threads have been joined
[2025-07-29 21:19:56] 2025-07-29 21:19:25,731 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:25,935 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:25,959 | INFO     | [data] control thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,055 | INFO     | [data] copytool_in thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,327 | INFO     | [payload] control thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,463 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,535 | INFO     | [data] copytool_out thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,623 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,628 | INFO     | [job] control thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,755 | INFO     | [job] validate thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,783 | INFO     | [payload] failed_post thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:26,887 | INFO     | [payload] validate_post thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:27,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 21:19:56] 2025-07-29 21:19:31,891 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 21:19:56] 2025-07-29 21:19:33,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298957985600)>', '<ExcThread(monitor, started 140298386663168)>']
[2025-07-29 21:19:56] 2025-07-29 21:19:38,455 | INFO     | all workflow threads have been joined
[2025-07-29 21:19:56] 2025-07-29 21:19:38,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 21:19:56] 2025-07-29 21:19:38,456 | INFO     | traces error code: 0
[2025-07-29 21:19:56] 2025-07-29 21:19:38,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 21:19:56] 2025-07-29 21:19:54,716 | INFO     | PID=2057418 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 21:19:56] 2025-07-29 21:19:54,716 | INFO     | .. there are 2 such processes running
[2025-07-29 21:19:56] 2025-07-29 21:19:54,716 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 21:19:56] 2025-07-29 21:19:54,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 21:19:56] 2025-07-29 21:19:54,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 21:19:56] 2025-07-29 21:19:54,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 21:19:56] 2025-07-29 21:19:54,717 | INFO     | [monitor] control thread has ended
[2025-07-29 21:19:56] 2025-07-29 21:19:54,947 [wrapper] ==== pilot stdout END ====
[2025-07-29 21:19:56] 2025-07-29 21:19:54,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 21:19:56] 2025-07-29 21:19:55,008 [wrapper] pilotpid: 2057418
[2025-07-29 21:19:56] 2025-07-29 21:19:55,023 [wrapper] Pilot exit status: 0
[2025-07-29 21:19:56] 2025-07-29 21:19:55,132 [wrapper] pandaids: 6745227574
[2025-07-29 21:19:56] 2025-07-29 21:19:55,391 [wrapper] cleanup supervisor_pilot 2118727 2057419
[2025-07-29 21:19:56] 2025-07-29 21:19:55,407 [wrapper] Test setup, not cleaning
[2025-07-29 21:19:56] 2025-07-29 21:19:55,459 [wrapper] apfmon messages muted
[2025-07-29 21:19:56] 2025-07-29 21:19:55,476 [wrapper] ==== wrapper stdout END ====
[2025-07-29 21:19:56] 2025-07-29 21:19:55,515 [wrapper] ==== wrapper stderr END ====
[2025-07-29 21:19:56]  *** Error codes and diagnostics ***
[2025-07-29 21:19:56]     "exeErrorCode": 0,
[2025-07-29 21:19:56]     "exeErrorDiag": "",
[2025-07-29 21:19:56]     "pilotErrorCode": 0,
[2025-07-29 21:19:56]     "pilotErrorDiag": "",
[2025-07-29 21:19:56]  *** Listing of results directory ***
[2025-07-29 21:19:56] total 439632
[2025-07-29 21:19:56] -rw-r--r-- 1 boinc boinc    530466 Jul 26 13:10 pilot3.tar.gz
[2025-07-29 21:19:56] -rw-r--r-- 1 boinc boinc      5112 Jul 26 13:34 queuedata.json
[2025-07-29 21:19:56] -rwx------ 1 boinc boinc     36292 Jul 26 13:35 runpilot2-wrapper.sh
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc       100 Jul 29 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 21:19:56] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 17:55 run_atlas
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc       105 Jul 29 17:55 job.xml
[2025-07-29 21:19:56] -rw-r--r-- 2 boinc boinc     15095 Jul 29 17:55 start_atlas.sh
[2025-07-29 21:19:56] drwxrwx--x 2 boinc boinc      4096 Jul 29 17:55 shared
[2025-07-29 21:19:56] -rw-r--r-- 2 boinc boinc    542890 Jul 29 17:55 input.tar.gz
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc      9357 Jul 29 17:55 init_data.xml
[2025-07-29 21:19:56] -rw-r--r-- 2 boinc boinc 229213901 Jul 29 17:55 EVNT.45743347._002205.pool.root.1
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc         0 Jul 29 17:55 boinc_lockfile
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc      2562 Jul 29 17:55 pandaJob.out
[2025-07-29 21:19:56] -rw------- 1 boinc boinc    977316 Jul 29 17:57 agis_schedconf.cvmfs.json
[2025-07-29 21:19:56] drwx------ 4 boinc boinc      4096 Jul 29 17:57 pilot3
[2025-07-29 21:19:56] -rw------- 1 boinc boinc 213886066 Jul 29 21:17 HITS.45743349._038576.pool.root.1
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc       530 Jul 29 21:17 boinc_task_state.xml
[2025-07-29 21:19:56] -rw------- 1 boinc boinc      1019 Jul 29 21:18 memory_monitor_summary.json
[2025-07-29 21:19:56] -rw------- 1 boinc boinc   1589827 Jul 29 21:18 agis_ddmendpoints.agis.ALL.json
[2025-07-29 21:19:56] -rw------- 1 boinc boinc    444191 Jul 29 21:18 log.45743349._038576.job.log.tgz.1
[2025-07-29 21:19:56] -rw------- 1 boinc boinc        95 Jul 29 21:19 pilot_heartbeat.json
[2025-07-29 21:19:56] -rw------- 1 boinc boinc      7759 Jul 29 21:19 heartbeat.json
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc      8192 Jul 29 21:19 boinc_mmap_file
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc        28 Jul 29 21:19 wrapper_checkpoint.txt
[2025-07-29 21:19:56] -rw------- 1 boinc boinc       822 Jul 29 21:19 pilotlog.txt
[2025-07-29 21:19:56] -rw------- 1 boinc boinc   1159275 Jul 29 21:19 log.45743349._038576.job.log.1
[2025-07-29 21:19:56] -rw------- 1 boinc boinc       357 Jul 29 21:19 output.list
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc       620 Jul 29 21:19 runtime_log
[2025-07-29 21:19:56] -rw------- 1 boinc boinc   1617920 Jul 29 21:19 result.tar.gz
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc      8950 Jul 29 21:19 runtime_log.err
[2025-07-29 21:19:56] -rw------- 1 boinc boinc       652 Jul 29 21:19 kPZLDmnEuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcESLDmBhB0Mm.diag
[2025-07-29 21:19:56] -rw-rw-r-- 1 boinc boinc     21044 Jul 29 21:19 stderr.txt
[2025-07-29 21:19:56] HITS file was successfully produced:
[2025-07-29 21:19:56] -rw------- 1 boinc boinc 213886066 Jul 29 21:17 shared/HITS.pool.root.1
[2025-07-29 21:19:56]  *** Contents of shared directory: ***
[2025-07-29 21:19:56] total 434856
[2025-07-29 21:19:56] -rw-r--r-- 2 boinc boinc     15095 Jul 29 17:55 start_atlas.sh
[2025-07-29 21:19:56] -rw-r--r-- 2 boinc boinc    542890 Jul 29 17:55 input.tar.gz
[2025-07-29 21:19:56] -rw-r--r-- 2 boinc boinc 229213901 Jul 29 17:55 ATLAS.root_0
[2025-07-29 21:19:56] -rw------- 1 boinc boinc 213886066 Jul 29 21:17 HITS.pool.root.1
[2025-07-29 21:19:56] -rw------- 1 boinc boinc   1617920 Jul 29 21:19 result.tar.gz
21:19:58 (2053798): run_atlas exited; CPU time 48888.915145
21:19:58 (2053798): called boinc_finish(0)

</stderr_txt>
]]>

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