Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:49:48 (3613): wrapper (7.7.26015): starting
14:49:48 (3613): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 14:49:48] Arguments: --nthreads 12
[2025-07-26 14:49:48] Threads: 12
[2025-07-26 14:49:48] Checking for CVMFS
[2025-07-26 14:49:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 14:49:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 14:49:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 14:49:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 14:49:49] 2.11.2.0 3087 110898 98016 148786 2 59 18280367 20275201 1 130560 0 39022418 99.974 9085409 10341 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 14:49:49] CVMFS is ok
[2025-07-26 14:49:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 14:49:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 14:49:49] Further information can be found at the LHC@home message board.
[2025-07-26 14:49:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 14:49:49] Checking for apptainer binary...
[2025-07-26 14:49:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 14:49:49] Running /usr/bin/apptainer --version
[2025-07-26 14:49:49] apptainer version 1.3.2-1.el7
[2025-07-26 14:49:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 14:49:50] c-115-42.aglt2.org
[2025-07-26 14:49:50] apptainer works
[2025-07-26 14:49:50] Set ATHENA_PROC_NUMBER=12
[2025-07-26 14:49:50] Set ATHENA_CORE_NUMBER=12
[2025-07-26 14:49:50] Starting ATLAS job with PandaID=6745262206
[2025-07-26 14:49:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:03:06]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:03:06]  mtime=0
[2025-07-26 16:03:06]  protocol_id=None
[2025-07-26 16:03:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 16:03:06]  replicas=None
[2025-07-26 16:03:06]  scope=mc23_13p6TeV
[2025-07-26 16:03:06]  status=None
[2025-07-26 16:03:06]  status_code=0
[2025-07-26 16:03:06]  storage_token=
[2025-07-26 16:03:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745262206/log.45743349._040712.job.log.tgz.1
[2025-07-26 16:03:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/f5/log.45743349._040712.job.log.tgz.1
[2025-07-26 16:03:06]  workdir=None
[2025-07-26 16:03:06] ]
[2025-07-26 16:03:06] 2025-07-26 20:02:44,257 | INFO     | transferring file log.45743349._040712.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745262206/log.45743349._040712.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 16:03:06] 2025-07-26 20:02:44,258 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745262206/log.45743349._040712.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._040712.job
[2025-07-26 16:03:06] 2025-07-26 20:02:44,278 | INFO     | adding to output.list: log.45743349._040712.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/f5/log.45743349._040712.job.log.tg
[2025-07-26 16:03:06] 2025-07-26 20:02:44,279 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 16:03:06] 2025-07-26 20:02:44,279 | INFO     | summary of transferred files:
[2025-07-26 16:03:06] 2025-07-26 20:02:44,280 | INFO     |  -- lfn=log.45743349._040712.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 16:03:06] 2025-07-26 20:02:44,280 | INFO     | stage-out finished correctly
[2025-07-26 16:03:06] 2025-07-26 20:02:45,523 | WARNING  | process 14643 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 16:03:06] 2025-07-26 20:02:45,523 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745262206/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:03:06] 2025-07-26 20:02:45,607 | INFO     | number of running child processes to parent process 14643: 1
[2025-07-26 16:03:06] 2025-07-26 20:02:45,607 | INFO     | maximum number of monitored processes: 6
[2025-07-26 16:03:06] 2025-07-26 20:02:46,524 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 16:03:06] 2025-07-26 20:02:46,602 | INFO     | job 6745262206 has state=finished
[2025-07-26 16:03:06] 2025-07-26 20:02:46,603 | INFO     | preparing for final server update for job 6745262206 in state='finished'
[2025-07-26 16:03:06] 2025-07-26 20:02:46,603 | INFO     | this job has now completed (state=finished)
[2025-07-26 16:03:06] 2025-07-26 20:02:46,603 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 16:03:06] 2025-07-26 20:02:46,603 | INFO     | log transfer has been attempted: DONE
[2025-07-26 16:03:06] 2025-07-26 20:02:46,604 | INFO     | job 6745262206 has finished - writing final server update
[2025-07-26 16:03:06] 2025-07-26 20:02:46,604 | INFO     | total number of processed events: 400 (read)
[2025-07-26 16:03:06] 2025-07-26 20:02:46,605 | INFO     | executing command: lscpu
[2025-07-26 16:03:06] 2025-07-26 20:02:46,631 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 16:03:06] 2025-07-26 20:02:48,110 | INFO     | monitor loop #326: job 0:6745262206 is in state 'finished'
[2025-07-26 16:03:06] 2025-07-26 20:02:48,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:03:06] 2025-07-26 20:02:50,613 | INFO     | monitor loop #327: job 0:6745262206 is in state 'finished'
[2025-07-26 16:03:06] 2025-07-26 20:02:50,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:03:06] 2025-07-26 20:02:50,968 | INFO     | PID=7211 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 16:03:06] 2025-07-26 20:02:52,081 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 16:03:06] 2025-07-26 20:02:52,085 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-07-26 16:03:06] 2025-07-26 20:02:52,087 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745262206/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:03:06] 2025-07-26 20:02:52,088 | INFO     | extracted standard info from prmon json
[2025-07-26 16:03:06] 2025-07-26 20:02:52,088 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 16:03:06] 2025-07-26 20:02:52,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 16:03:06] 2025-07-26 20:02:52,088 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:03:06] 2025-07-26 20:02:52,088 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:03:06] 2025-07-26 20:02:52,090 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:03:06] 2025-07-26 20:02:52,090 | INFO     | sum of square deviations: 81266640.0
[2025-07-26 16:03:06] 2025-07-26 20:02:52,091 | INFO     | sum of deviations: -6720949866.0
[2025-07-26 16:03:06] 2025-07-26 20:02:52,091 | INFO     | mean x: 1753558059.5
[2025-07-26 16:03:06] 2025-07-26 20:02:52,091 | INFO     | mean y: 2801164.8125
[2025-07-26 16:03:06] 2025-07-26 20:02:52,091 | INFO     | -- intersect: 145026341021.01605
[2025-07-26 16:03:06] 2025-07-26 20:02:52,091 | INFO     | intersect: 145026341021.01605
[2025-07-26 16:03:06] 2025-07-26 20:02:52,092 | INFO     | chi2: 0.04713261573034211
[2025-07-26 16:03:06] 2025-07-26 20:02:52,092 | INFO     | -- intersect: 145026341021.01605
[2025-07-26 16:03:06] 2025-07-26 20:02:52,092 | INFO     | current memory leak: -82.70 B/s (using 64 data points, chi2=0.05)
[2025-07-26 16:03:06] 2025-07-26 20:02:52,092 | INFO     | could have reported an average CPU frequency of 2165 MHz (6 samples)
[2025-07-26 16:03:06] 2025-07-26 20:02:52,092 | INFO     | ..............................
[2025-07-26 16:03:06] 2025-07-26 20:02:52,093 | INFO     | . Timing measurements:
[2025-07-26 16:03:06] 2025-07-26 20:02:52,093 | INFO     | . get job = 0 s
[2025-07-26 16:03:06] 2025-07-26 20:02:52,093 | INFO     | . initial setup = 2 s
[2025-07-26 16:03:06] 2025-07-26 20:02:52,093 | INFO     | . payload setup = 9 s
[2025-07-26 16:03:06] 2025-07-26 20:02:52,093 | INFO     | . stage-in = 0 s
[2025-07-26 16:03:06] 2025-07-26 20:02:52,093 | INFO     | . payload execution = 4331 s
[2025-07-26 16:03:06] 2025-07-26 20:02:52,093 | INFO     | . stage-out = 0 s
[2025-07-26 16:03:06] 2025-07-26 20:02:52,093 | INFO     | . log creation = 0 s
[2025-07-26 16:03:06] 2025-07-26 20:02:52,094 | INFO     | ..............................
[2025-07-26 16:03:06] 2025-07-26 20:02:52,171 | INFO     | 
[2025-07-26 16:03:06] 2025-07-26 20:02:52,171 | INFO     | job summary report
[2025-07-26 16:03:06] 2025-07-26 20:02:52,171 | INFO     | --------------------------------------------------
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | PanDA job id: 6745262206
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | task id: 45743349
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | errors: (none)
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | pilot state: finished 
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | transexitcode: 0
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | exeerrorcode: 0
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | exeerrordiag: 
[2025-07-26 16:03:06] 2025-07-26 20:02:52,172 | INFO     | exitcode: 0
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | exitmsg: OK
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | cpuconsumptiontime: 47378 s
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | nevents: 400
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | neventsw: 0
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | pid: 14643
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | pgrp: 14643
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | corecount: 12
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | event service: False
[2025-07-26 16:03:06] 2025-07-26 20:02:52,173 | INFO     | sizes: {0: 2397474, 1: 2397474, 5: 2397764, 11: 2397820, 4343: 2423870, 4345: 2432868, 4347: 2433052, 4352: 2433246}
[2025-07-26 16:03:06] 2025-07-26 20:02:52,174 | INFO     | --------------------------------------------------
[2025-07-26 16:03:06] 2025-07-26 20:02:52,174 | INFO     | 
[2025-07-26 16:03:06] 2025-07-26 20:02:52,174 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 16:03:06] 2025-07-26 20:02:52,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,199 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,199 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:03:06] 2025-07-26 20:02:52,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:03:06] 2025-07-26 20:02:52,202 | INFO     | job 6745262206 has completed (purged errors)
[2025-07-26 16:03:06] 2025-07-26 20:02:52,203 | INFO     | overall cleanup function is called
[2025-07-26 16:03:06] 2025-07-26 20:02:53,210 | INFO     | --- collectZombieJob: --- 10, [14643]
[2025-07-26 16:03:06] 2025-07-26 20:02:53,211 | INFO     | zombie collector waiting for pid 14643
[2025-07-26 16:03:06] 2025-07-26 20:02:53,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:03:06] 2025-07-26 20:02:53,211 | INFO     | collected zombie processes
[2025-07-26 16:03:06] 2025-07-26 20:02:53,211 | INFO     | will attempt to kill all subprocesses of pid=14643
[2025-07-26 16:03:06] 2025-07-26 20:02:53,299 | INFO     | process IDs to be killed: [14643] (in reverse order)
[2025-07-26 16:03:06] 2025-07-26 20:02:53,351 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:03:06] 2025-07-26 20:02:53,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:03:06] 2025-07-26 20:02:53,356 | INFO     | did not find any defunct processes belonging to 14643
[2025-07-26 16:03:06] 2025-07-26 20:02:53,358 | INFO     | did not find any defunct processes belonging to 14643
[2025-07-26 16:03:06] 2025-07-26 20:02:53,358 | INFO     | ready for new job
[2025-07-26 16:03:06] 2025-07-26 20:02:53,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:03:06] 2025-07-26 20:02:53,360 | INFO     | ***************************************
[2025-07-26 16:03:06] 2025-07-26 20:02:53,360 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:03:06] 2025-07-26 20:02:53,360 | INFO     | ***************************************
[2025-07-26 16:03:06] 2025-07-26 20:02:53,360 | INFO     | 
[2025-07-26 16:03:06] 2025-07-26 20:02:53,360 | INFO     | architecture information:
[2025-07-26 16:03:06] 2025-07-26 20:02:53,361 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:03:06] 2025-07-26 20:02:53,376 | INFO     | cat /etc/os-release:
[2025-07-26 16:03:06] NAME="CentOS Linux"
[2025-07-26 16:03:06] VERSION="7 (Core)"
[2025-07-26 16:03:06] ID="centos"
[2025-07-26 16:03:06] ID_LIKE="rhel fedora"
[2025-07-26 16:03:06] VERSION_ID="7"
[2025-07-26 16:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:03:06] ANSI_COLOR="0;31"
[2025-07-26 16:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:03:06] HOME_URL="https://www.centos.org/"
[2025-07-26 16:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:03:06] 
[2025-07-26 16:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:03:06] 
[2025-07-26 16:03:06] 2025-07-26 20:02:53,376 | INFO     | ***************************************
[2025-07-26 16:03:06] 2025-07-26 20:02:53,879 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 16:03:06] 2025-07-26 20:02:53,897 | INFO     | sufficient remaining disk space (18741198848 B)
[2025-07-26 16:03:06] 2025-07-26 20:02:53,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:03:06] 2025-07-26 20:02:53,897 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:03:06] 2025-07-26 20:02:53,898 | INFO     | update_server=False
[2025-07-26 16:03:06] 2025-07-26 20:02:53,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:03:06] 2025-07-26 20:02:53,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:03:06] 2025-07-26 20:02:53,898 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 16:03:06] 2025-07-26 20:02:53,899 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:03:06] 2025-07-26 20:02:53,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:03:06] 2025-07-26 20:02:53,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:03:06] 2025-07-26 20:02:54,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:03:06] 2025-07-26 20:02:54,122 | INFO     | aborting loop
[2025-07-26 16:03:06] 2025-07-26 20:02:54,187 | INFO     | all job control threads have been joined
[2025-07-26 16:03:06] 2025-07-26 20:02:54,361 | INFO     | all payload control threads have been joined
[2025-07-26 16:03:06] 2025-07-26 20:02:54,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:03:06] 2025-07-26 20:02:54,900 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:54,903 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:54,998 | INFO     | all data control threads have been joined
[2025-07-26 16:03:06] 2025-07-26 20:02:55,127 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:55,193 | INFO     | [job] control thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:55,194 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:55,367 | INFO     | [payload] control thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:55,546 | INFO     | [job] validate thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:55,695 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:55,832 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:55,852 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:55,918 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:56,003 | INFO     | [data] control thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:56,143 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:56,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:56,878 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:02:57,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:03:06] 2025-07-26 20:03:01,117 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:03:06] 2025-07-26 20:03:01,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797200488256)>', '<ExcThread(monitor, started 139796018099968)>']
[2025-07-26 16:03:06] 2025-07-26 20:03:01,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:03:06] 2025-07-26 20:03:01,935 | INFO     | [monitor] control thread has ended
[2025-07-26 16:03:06] 2025-07-26 20:03:06,553 | INFO     | all workflow threads have been joined
[2025-07-26 16:03:06] 2025-07-26 20:03:06,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:03:06] 2025-07-26 20:03:06,553 | INFO     | traces error code: 0
[2025-07-26 16:03:06] 2025-07-26 20:03:06,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:03:06] 2025-07-26 20:03:06,632 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:03:06] 2025-07-26 20:03:06,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:03:06] 2025-07-26 20:03:06,639 [wrapper] pilotpid: 7211
[2025-07-26 16:03:06] 2025-07-26 20:03:06,642 [wrapper] Pilot exit status: 0
[2025-07-26 16:03:06] 2025-07-26 20:03:06,657 [wrapper] pandaids: 6745262206
[2025-07-26 16:03:06] 2025-07-26 20:03:06,696 [wrapper] cleanup supervisor_pilot  9678 7212
[2025-07-26 16:03:06] 2025-07-26 20:03:06,699 [wrapper] Test setup, not cleaning
[2025-07-26 16:03:06] 2025-07-26 20:03:06,703 [wrapper] apfmon messages muted
[2025-07-26 16:03:06] 2025-07-26 20:03:06,707 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:03:06] 2025-07-26 20:03:06,711 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:03:06]  *** Error codes and diagnostics ***
[2025-07-26 16:03:06]     "exeErrorCode": 0,
[2025-07-26 16:03:06]     "exeErrorDiag": "",
[2025-07-26 16:03:06]     "pilotErrorCode": 0,
[2025-07-26 16:03:06]     "pilotErrorDiag": "",
[2025-07-26 16:03:06]  *** Listing of results directory ***
[2025-07-26 16:03:06] total 352472
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 11:50 pilot3.tar.gz
[2025-07-26 16:03:06] -rwx------ 1 boincer umatlas     36292 Jul 26 12:17 runpilot2-wrapper.sh
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 12:17 queuedata.json
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas       100 Jul 26 14:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:03:06] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 14:49 run_atlas
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas       105 Jul 26 14:49 job.xml
[2025-07-26 16:03:06] -rw-r--r-- 2 boincer umatlas 146241104 Jul 26 14:49 EVNT.45743347._002326.pool.root.1
[2025-07-26 16:03:06] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 14:49 start_atlas.sh
[2025-07-26 16:03:06] drwxrwx--x 2 boincer umatlas      4096 Jul 26 14:49 shared
[2025-07-26 16:03:06] -rw-r--r-- 2 boincer umatlas    542889 Jul 26 14:49 input.tar.gz
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas         0 Jul 26 14:49 boinc_lockfile
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas      2562 Jul 26 14:49 pandaJob.out
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas    980125 Jul 26 14:50 agis_schedconf.cvmfs.json
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas   1593052 Jul 26 14:50 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:03:06] drwx------ 4 boincer umatlas      4096 Jul 26 14:50 pilot3
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas      5869 Jul 26 15:57 init_data.xml
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas        95 Jul 26 16:01 pilot_heartbeat.json
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas 209233399 Jul 26 16:02 HITS.45743349._040712.pool.root.1
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas      1049 Jul 26 16:02 memory_monitor_summary.json
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas    364591 Jul 26 16:02 log.45743349._040712.job.log.tgz.1
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 16:02 boinc_mmap_file
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas        27 Jul 26 16:02 wrapper_checkpoint.txt
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas       530 Jul 26 16:02 boinc_task_state.xml
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas      7854 Jul 26 16:02 heartbeat.json
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas      4480 Jul 26 16:03 pilotlog.txt
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas    422031 Jul 26 16:03 log.45743349._040712.job.log.1
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas       357 Jul 26 16:03 output.list
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas       620 Jul 26 16:03 runtime_log
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas    808960 Jul 26 16:03 result.tar.gz
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 16:03 runtime_log.err
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas       659 Jul 26 16:03 RqXKDmllwz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRYSLDmyvLbln.diag
[2025-07-26 16:03:06] -rw-r--r-- 1 boincer umatlas     21763 Jul 26 16:03 stderr.txt
[2025-07-26 16:03:06] HITS file was successfully produced:
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas 209233399 Jul 26 16:02 shared/HITS.pool.root.1
[2025-07-26 16:03:06]  *** Contents of shared directory: ***
[2025-07-26 16:03:06] total 348488
[2025-07-26 16:03:06] -rw-r--r-- 2 boincer umatlas 146241104 Jul 26 14:49 ATLAS.root_0
[2025-07-26 16:03:06] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 14:49 start_atlas.sh
[2025-07-26 16:03:06] -rw-r--r-- 2 boincer umatlas    542889 Jul 26 14:49 input.tar.gz
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas 209233399 Jul 26 16:02 HITS.pool.root.1
[2025-07-26 16:03:06] -rw------- 1 boincer umatlas    808960 Jul 26 16:03 result.tar.gz
16:03:08 (3613): run_atlas exited; CPU time 47365.847684
16:03:08 (3613): called boinc_finish(0)

</stderr_txt>
]]>

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