Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
09:04:03 (485279): wrapper (7.7.26015): starting
09:04:03 (485279): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 09:04:03] Arguments: --nthreads 4
[2025-07-28 09:04:03] Threads: 4
[2025-07-28 09:04:03] Checking for CVMFS
[2025-07-28 09:04:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 09:04:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 09:04:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 09:04:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 09:04:04] 2.12.7.0 1691460 9120 63000 148839 3 57 3100893 6144000 917 130560 0 8232559 99.992 331141 2031 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-28 09:04:04] CVMFS is ok
[2025-07-28 09:04:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 09:04:04] Checking for apptainer binary...
[2025-07-28 09:04:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 09:04:04] Running /usr/bin/apptainer --version
[2025-07-28 09:04:04] apptainer version 1.4.1
[2025-07-28 09:04:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 09:04:04] TS-P320
[2025-07-28 09:04:04] apptainer works
[2025-07-28 09:04:04] Set ATHENA_PROC_NUMBER=4
[2025-07-28 09:04:04] Set ATHENA_CORE_NUMBER=4
[2025-07-28 09:04:04] Starting ATLAS job with PandaID=6745227343
[2025-07-28 09:04:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 11:22:38]  *** The last 200 lines of the pilot log: ***
[2025-07-28 11:22:38] 2025-07-28 09:22:06,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 11:22:38] 2025-07-28 09:22:06,450 | INFO     | fitting pss+swap vs Time
[2025-07-28 11:22:38] 2025-07-28 09:22:06,450 | INFO     | sum of square deviations: 779958810.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,451 | INFO     | sum of deviations: -2071732813.000002
[2025-07-28 11:22:38] 2025-07-28 09:22:06,451 | INFO     | mean x: 1753690386.5
[2025-07-28 11:22:38] 2025-07-28 09:22:06,451 | INFO     | mean y: 2355040.220588235
[2025-07-28 11:22:38] 2025-07-28 09:22:06,451 | INFO     | -- intersect: 4660521434.359666
[2025-07-28 11:22:38] 2025-07-28 09:22:06,451 | INFO     | intersect: 4660521434.359666
[2025-07-28 11:22:38] 2025-07-28 09:22:06,451 | INFO     | chi2: 1.80850290625559
[2025-07-28 11:22:38] 2025-07-28 09:22:06,452 | INFO     | sum of square deviations: 697054930.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,452 | INFO     | sum of deviations: 5883238330.000001
[2025-07-28 11:22:38] 2025-07-28 09:22:06,452 | INFO     | mean x: 1753690234.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,452 | INFO     | mean y: 2369243.2595419846
[2025-07-28 11:22:38] 2025-07-28 09:22:06,452 | INFO     | -- intersect: -14799014635.64864
[2025-07-28 11:22:38] 2025-07-28 09:22:06,452 | INFO     | intersect: -14799014635.64864
[2025-07-28 11:22:38] 2025-07-28 09:22:06,452 | INFO     | chi2: 1.1479287740061161
[2025-07-28 11:22:38] 2025-07-28 09:22:06,453 | INFO     | current chi2=1.1479287740061161 (change=36.52601994525725 %)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,453 | INFO     | sum of square deviations: 620244187.5
[2025-07-28 11:22:38] 2025-07-28 09:22:06,453 | INFO     | sum of deviations: 5892990308.500002
[2025-07-28 11:22:38] 2025-07-28 09:22:06,453 | INFO     | mean x: 1753690081.5
[2025-07-28 11:22:38] 2025-07-28 09:22:06,453 | INFO     | mean y: 2369260.738095238
[2025-07-28 11:22:38] 2025-07-28 09:22:06,453 | INFO     | -- intersect: -16659582374.870064
[2025-07-28 11:22:38] 2025-07-28 09:22:06,453 | INFO     | intersect: -16659582374.870064
[2025-07-28 11:22:38] 2025-07-28 09:22:06,454 | INFO     | chi2: 1.1493941561624605
[2025-07-28 11:22:38] 2025-07-28 09:22:06,454 | INFO     | current chi2=1.1493941561624605 (change=-0.12765444943333995 %)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,454 | INFO     | right removable region: 125
[2025-07-28 11:22:38] 2025-07-28 09:22:06,454 | INFO     | sum of square deviations: 697054930.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,454 | INFO     | sum of deviations: -11772782108.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,454 | INFO     | mean x: 1753690539.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,454 | INFO     | mean y: 2372265.4580152673
[2025-07-28 11:22:38] 2025-07-28 09:22:06,455 | INFO     | -- intersect: 29621008777.372616
[2025-07-28 11:22:38] 2025-07-28 09:22:06,455 | INFO     | intersect: 29621008777.372616
[2025-07-28 11:22:38] 2025-07-28 09:22:06,455 | INFO     | chi2: 0.7698696126599349
[2025-07-28 11:22:38] 2025-07-28 09:22:06,455 | INFO     | current chi2=0.7698696126599349 (change=57.43055706479845 %)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,455 | INFO     | sum of square deviations: 620244187.5
[2025-07-28 11:22:38] 2025-07-28 09:22:06,455 | INFO     | sum of deviations: -5869359793.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,455 | INFO     | mean x: 1753690691.5
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | mean y: 2360532.412698413
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | -- intersect: 16597504576.46465
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | intersect: 16597504576.46465
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | chi2: 0.7072637058444964
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | current chi2=0.7072637058444964 (change=8.132014276954282 %)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | left removable region: 20
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | sum of square deviations: 358927660.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | sum of deviations: 2001622097.0000002
[2025-07-28 11:22:38] 2025-07-28 09:22:06,456 | INFO     | mean x: 1753690661.0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | mean y: 2376414.8476190474
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | -- intersect: -9777382487.99129
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | intersect: -9777382487.99129
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | chi2: 0.0007457738809223012
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | -- intersect: -9777382487.99129
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | current memory leak: 5.58 B/s (using 105 data points, chi2=0.00)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | could have reported an average CPU frequency of 4000 MHz (8 samples)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | ..............................
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | . Timing measurements:
[2025-07-28 11:22:38] 2025-07-28 09:22:06,457 | INFO     | . get job = 0 s
[2025-07-28 11:22:38] 2025-07-28 09:22:06,458 | INFO     | . initial setup = 1 s
[2025-07-28 11:22:38] 2025-07-28 09:22:06,458 | INFO     | . payload setup = 3 s
[2025-07-28 11:22:38] 2025-07-28 09:22:06,458 | INFO     | . stage-in = 0 s
[2025-07-28 11:22:38] 2025-07-28 09:22:06,458 | INFO     | . payload execution = 8251 s
[2025-07-28 11:22:38] 2025-07-28 09:22:06,458 | INFO     | . stage-out = 0 s
[2025-07-28 11:22:38] 2025-07-28 09:22:06,458 | INFO     | . log creation = 0 s
[2025-07-28 11:22:38] 2025-07-28 09:22:06,458 | INFO     | ..............................
[2025-07-28 11:22:38] 2025-07-28 09:22:06,520 | INFO     | 
[2025-07-28 11:22:38] 2025-07-28 09:22:06,520 | INFO     | job summary report
[2025-07-28 11:22:38] 2025-07-28 09:22:06,520 | INFO     | --------------------------------------------------
[2025-07-28 11:22:38] 2025-07-28 09:22:06,520 | INFO     | PanDA job id: 6745227343
[2025-07-28 11:22:38] 2025-07-28 09:22:06,520 | INFO     | task id: 45743349
[2025-07-28 11:22:38] 2025-07-28 09:22:06,520 | INFO     | errors: (none)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 11:22:38] 2025-07-28 09:22:06,520 | INFO     | pilot state: finished 
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | transexitcode: 0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | exeerrorcode: 0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | exeerrordiag: 
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | exitcode: 0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | exitmsg: OK
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | cpuconsumptiontime: 31924 s
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | nevents: 400
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | neventsw: 0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | pid: 495367
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | pgrp: 495367
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | corecount: 4
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | event service: False
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | sizes: {0: 2397475, 2: 2397737, 11: 2397765, 8258: 2425668, 8259: 2434666, 8260: 2434722, 8264: 2435044}
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | --------------------------------------------------
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | 
[2025-07-28 11:22:38] 2025-07-28 09:22:06,521 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | job 6745227343 has completed (purged errors)
[2025-07-28 11:22:38] 2025-07-28 09:22:06,534 | INFO     | overall cleanup function is called
[2025-07-28 11:22:38] 2025-07-28 09:22:07,538 | INFO     | --- collectZombieJob: --- 10, [495367]
[2025-07-28 11:22:38] 2025-07-28 09:22:07,538 | INFO     | zombie collector waiting for pid 495367
[2025-07-28 11:22:38] 2025-07-28 09:22:07,538 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 11:22:38] 2025-07-28 09:22:07,538 | INFO     | collected zombie processes
[2025-07-28 11:22:38] 2025-07-28 09:22:07,538 | INFO     | will attempt to kill all subprocesses of pid=495367
[2025-07-28 11:22:38] 2025-07-28 09:22:07,597 | INFO     | process IDs to be killed: [495367] (in reverse order)
[2025-07-28 11:22:38] 2025-07-28 09:22:07,621 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 11:22:38] 2025-07-28 09:22:07,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 11:22:38] 2025-07-28 09:22:07,623 | INFO     | did not find any defunct processes belonging to 495367
[2025-07-28 11:22:38] 2025-07-28 09:22:07,625 | INFO     | did not find any defunct processes belonging to 495367
[2025-07-28 11:22:38] 2025-07-28 09:22:07,625 | INFO     | ready for new job
[2025-07-28 11:22:38] 2025-07-28 09:22:07,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 11:22:38] 2025-07-28 09:22:07,626 | INFO     | ***************************************
[2025-07-28 11:22:38] 2025-07-28 09:22:07,626 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 11:22:38] 2025-07-28 09:22:07,626 | INFO     | ***************************************
[2025-07-28 11:22:38] 2025-07-28 09:22:07,626 | INFO     | 
[2025-07-28 11:22:38] 2025-07-28 09:22:07,626 | INFO     | architecture information:
[2025-07-28 11:22:38] 2025-07-28 09:22:07,627 | INFO     | executing command: cat /etc/os-release
[2025-07-28 11:22:38] 2025-07-28 09:22:07,635 | INFO     | cat /etc/os-release:
[2025-07-28 11:22:38] NAME="CentOS Linux"
[2025-07-28 11:22:38] VERSION="7 (Core)"
[2025-07-28 11:22:38] ID="centos"
[2025-07-28 11:22:38] ID_LIKE="rhel fedora"
[2025-07-28 11:22:38] VERSION_ID="7"
[2025-07-28 11:22:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 11:22:38] ANSI_COLOR="0;31"
[2025-07-28 11:22:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 11:22:38] HOME_URL="https://www.centos.org/"
[2025-07-28 11:22:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 11:22:38] 
[2025-07-28 11:22:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 11:22:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 11:22:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 11:22:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 11:22:38] 
[2025-07-28 11:22:38] 2025-07-28 09:22:07,635 | INFO     | ***************************************
[2025-07-28 11:22:38] 2025-07-28 09:22:08,138 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 11:22:38] 2025-07-28 09:22:08,147 | INFO     | sufficient remaining disk space (208885776384 B)
[2025-07-28 11:22:38] 2025-07-28 09:22:08,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 11:22:38] 2025-07-28 09:22:08,147 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 11:22:38] 2025-07-28 09:22:08,147 | INFO     | update_server=False
[2025-07-28 11:22:38] 2025-07-28 09:22:08,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 11:22:38] 2025-07-28 09:22:08,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 11:22:38] 2025-07-28 09:22:08,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 11:22:38] 2025-07-28 09:22:08,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 11:22:38] 2025-07-28 09:22:08,531 | INFO     | all payload control threads have been joined
[2025-07-28 11:22:38] 2025-07-28 09:22:08,554 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 11:22:38] 2025-07-28 09:22:08,554 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 11:22:38] 2025-07-28 09:22:08,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 11:22:38] 2025-07-28 09:22:08,554 | INFO     | will abort loop
[2025-07-28 11:22:38] 2025-07-28 09:22:09,152 | INFO     | [job] retrieve thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:09,153 | INFO     | [job] queue monitor thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:09,242 | INFO     | all data control threads have been joined
[2025-07-28 11:22:38] 2025-07-28 09:22:09,461 | INFO     | [payload] failed_post thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:09,485 | INFO     | all job control threads have been joined
[2025-07-28 11:22:38] 2025-07-28 09:22:09,501 | INFO     | [data] copytool_in thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:09,536 | INFO     | [payload] control thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:09,560 | INFO     | [job] job monitor thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:09,959 | INFO     | [job] validate thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:10,006 | INFO     | [payload] validate_post thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:10,126 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:10,153 | INFO     | [data] copytool_out thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:10,176 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:10,248 | INFO     | [data] control thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:10,361 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:10,411 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:10,490 | INFO     | [job] control thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:12,361 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 11:22:38] 2025-07-28 09:22:13,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651471808320)>', '<ExcThread(monitor, started 139650836449024)>']
[2025-07-28 11:22:38] 2025-07-28 09:22:18,353 | INFO     | all workflow threads have been joined
[2025-07-28 11:22:38] 2025-07-28 09:22:18,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 11:22:38] 2025-07-28 09:22:18,354 | INFO     | traces error code: 0
[2025-07-28 11:22:38] 2025-07-28 09:22:18,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 11:22:38] 2025-07-28 09:22:38,819 | INFO     | PID=488903 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 11:22:38] 2025-07-28 09:22:38,819 | INFO     | .. there are 2 such processes running
[2025-07-28 11:22:38] 2025-07-28 09:22:38,820 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 11:22:38] 2025-07-28 09:22:38,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 11:22:38] 2025-07-28 09:22:38,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 11:22:38] 2025-07-28 09:22:38,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 11:22:38] 2025-07-28 09:22:38,820 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 11:22:38] 2025-07-28 09:22:38,820 | INFO     | [monitor] control thread has ended
[2025-07-28 11:22:38] 2025-07-28 09:22:38,888 [wrapper] ==== pilot stdout END ====
[2025-07-28 11:22:38] 2025-07-28 09:22:38,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 11:22:38] 2025-07-28 09:22:38,890 [wrapper] pilotpid: 488903
[2025-07-28 11:22:38] 2025-07-28 09:22:38,892 [wrapper] Pilot exit status: 0
[2025-07-28 11:22:38] 2025-07-28 09:22:38,896 [wrapper] pandaids: 6745227343
[2025-07-28 11:22:38] 2025-07-28 09:22:38,909 [wrapper] cleanup supervisor_pilot  539027 488904
[2025-07-28 11:22:38] 2025-07-28 09:22:38,911 [wrapper] Test setup, not cleaning
[2025-07-28 11:22:38] 2025-07-28 09:22:38,912 [wrapper] apfmon messages muted
[2025-07-28 11:22:38] 2025-07-28 09:22:38,913 [wrapper] ==== wrapper stdout END ====
[2025-07-28 11:22:38] 2025-07-28 09:22:38,915 [wrapper] ==== wrapper stderr END ====
[2025-07-28 11:22:38]  *** Error codes and diagnostics ***
[2025-07-28 11:22:38]     "exeErrorCode": 0,
[2025-07-28 11:22:38]     "exeErrorDiag": "",
[2025-07-28 11:22:38]     "pilotErrorCode": 0,
[2025-07-28 11:22:38]     "pilotErrorDiag": "",
[2025-07-28 11:22:38]  *** Listing of results directory ***
[2025-07-28 11:22:38] insgesamt 427796
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc    530466 26. Jul 14:44 pilot3.tar.gz
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc      5112 26. Jul 15:05 queuedata.json
[2025-07-28 11:22:38] -rwx------ 1 boinc boinc     36292 26. Jul 15:06 runpilot2-wrapper.sh
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc       100 28. Jul 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 11:22:38] -rwxr-xr-x 1 boinc boinc      7986 28. Jul 09:04 run_atlas
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc       105 28. Jul 09:04 job.xml
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc      9787 28. Jul 09:04 init_data.xml
[2025-07-28 11:22:38] -rw-r--r-- 2 boinc boinc 229852328 28. Jul 09:04 EVNT.45743347._002196.pool.root.1
[2025-07-28 11:22:38] -rw-r--r-- 2 boinc boinc     15095 28. Jul 09:04 start_atlas.sh
[2025-07-28 11:22:38] drwxrwx--x 2 boinc boinc      4096 28. Jul 09:04 shared
[2025-07-28 11:22:38] -rw-r--r-- 2 boinc boinc    542894 28. Jul 09:04 input.tar.gz
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc         0 28. Jul 09:04 boinc_lockfile
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc      2563 28. Jul 09:04 pandaJob.out
[2025-07-28 11:22:38] -rw------- 1 boinc boinc    978460 28. Jul 09:04 agis_schedconf.cvmfs.json
[2025-07-28 11:22:38] -rw------- 1 boinc boinc   1593052 28. Jul 09:04 agis_ddmendpoints.agis.ALL.json
[2025-07-28 11:22:38] drwx------ 4 boinc boinc      4096 28. Jul 09:04 pilot3
[2025-07-28 11:22:38] -rw------- 1 boinc boinc 202160029 28. Jul 11:21 HITS.45743349._038346.pool.root.1
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc       529 28. Jul 11:21 boinc_task_state.xml
[2025-07-28 11:22:38] -rw------- 1 boinc boinc      1017 28. Jul 11:21 memory_monitor_summary.json
[2025-07-28 11:22:38] -rw------- 1 boinc boinc    283542 28. Jul 11:22 log.45743349._038346.job.log.tgz.1
[2025-07-28 11:22:38] -rw------- 1 boinc boinc      7754 28. Jul 11:22 heartbeat.json
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc      8192 28. Jul 11:22 boinc_mmap_file
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc        27 28. Jul 11:22 wrapper_checkpoint.txt
[2025-07-28 11:22:38] -rw------- 1 boinc boinc       891 28. Jul 11:22 pilotlog.txt
[2025-07-28 11:22:38] -rw------- 1 boinc boinc        95 28. Jul 11:22 pilot_heartbeat.json
[2025-07-28 11:22:38] -rw------- 1 boinc boinc    799114 28. Jul 11:22 log.45743349._038346.job.log.1
[2025-07-28 11:22:38] -rw------- 1 boinc boinc       357 28. Jul 11:22 output.list
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc       620 28. Jul 11:22 runtime_log
[2025-07-28 11:22:38] -rw------- 1 boinc boinc   1105920 28. Jul 11:22 result.tar.gz
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc      8625 28. Jul 11:22 runtime_log.err
[2025-07-28 11:22:38] -rw------- 1 boinc boinc       643 28. Jul 11:22 d9LKDmlmtz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1BSLDmwLzDwn.diag
[2025-07-28 11:22:38] -rw-r--r-- 1 boinc boinc     20567 28. Jul 11:22 stderr.txt
[2025-07-28 11:22:38] HITS file was successfully produced:
[2025-07-28 11:22:38] -rw------- 1 boinc boinc 202160029 28. Jul 11:21 shared/HITS.pool.root.1
[2025-07-28 11:22:38]  *** Contents of shared directory: ***
[2025-07-28 11:22:38] insgesamt 423528
[2025-07-28 11:22:38] -rw-r--r-- 2 boinc boinc 229852328 28. Jul 09:04 ATLAS.root_0
[2025-07-28 11:22:38] -rw-r--r-- 2 boinc boinc     15095 28. Jul 09:04 start_atlas.sh
[2025-07-28 11:22:38] -rw-r--r-- 2 boinc boinc    542894 28. Jul 09:04 input.tar.gz
[2025-07-28 11:22:38] -rw------- 1 boinc boinc 202160029 28. Jul 11:21 HITS.pool.root.1
[2025-07-28 11:22:38] -rw------- 1 boinc boinc   1105920 28. Jul 11:22 result.tar.gz
11:22:40 (485279): run_atlas exited; CPU time 32002.498156
11:22:40 (485279): called boinc_finish(0)

</stderr_txt>
]]>

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