Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:33:53 (1267893): wrapper (7.7.26015): starting
14:33:53 (1267893): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 14:33:53] Arguments: --nthreads 8
[2025-07-26 14:33:53] Threads: 8
[2025-07-26 14:33:53] Checking for CVMFS
[2025-07-26 14:33:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 14:33:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 14:33:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 14:33:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 14:33:54] 2.13.0.0 97728 26159 297180 148786 2 247 18825296 32935937 33368 16776704 2 244749257 99.595 297067256 18355 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 14:33:54] CVMFS is ok
[2025-07-26 14:33:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 14:33:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 14:33:54] Further information can be found at the LHC@home message board.
[2025-07-26 14:33:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 14:33:54] Checking for apptainer binary...
[2025-07-26 14:33:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 14:33:54] Running /usr/bin/apptainer --version
[2025-07-26 14:33:54] apptainer version 1.4.1-1.el9
[2025-07-26 14:33:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 14:33:54] c7-2-37.aglt2.org
[2025-07-26 14:33:54] apptainer works
[2025-07-26 14:33:54] Set ATHENA_PROC_NUMBER=8
[2025-07-26 14:33:54] Set ATHENA_CORE_NUMBER=8
[2025-07-26 14:33:54] Starting ATLAS job with PandaID=6745231654
[2025-07-26 14:33:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:30:47]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:30:47] 2025-07-26 20:30:10,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:30:47] 2025-07-26 20:30:12,705 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 16:30:47] 2025-07-26 20:30:12,731 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3233.7334895833324
[2025-07-26 16:30:47] 2025-07-26 20:30:12,747 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745231654/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:30:47] 2025-07-26 20:30:12,748 | INFO     | extracted standard info from prmon json
[2025-07-26 16:30:47] 2025-07-26 20:30:12,748 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 16:30:47] 2025-07-26 20:30:12,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 16:30:47] 2025-07-26 20:30:12,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:30:47] 2025-07-26 20:30:12,749 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:30:47] 2025-07-26 20:30:12,751 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:30:47] 2025-07-26 20:30:12,751 | INFO     | sum of square deviations: 447383272.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,752 | INFO     | sum of deviations: -1156237981.0000067
[2025-07-26 16:30:47] 2025-07-26 20:30:12,752 | INFO     | mean x: 1753558319.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,752 | INFO     | mean y: 2208745.548672566
[2025-07-26 16:30:47] 2025-07-26 20:30:12,752 | INFO     | -- intersect: 4534185815.818582
[2025-07-26 16:30:47] 2025-07-26 20:30:12,752 | INFO     | intersect: 4534185815.818582
[2025-07-26 16:30:47] 2025-07-26 20:30:12,752 | INFO     | chi2: 1.6353078580814238
[2025-07-26 16:30:47] 2025-07-26 20:30:12,753 | INFO     | sum of square deviations: 390582207.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,753 | INFO     | sum of deviations: -635719979.0000057
[2025-07-26 16:30:47] 2025-07-26 20:30:12,753 | INFO     | mean x: 1753558166.5
[2025-07-26 16:30:47] 2025-07-26 20:30:12,753 | INFO     | mean y: 2210119.074074074
[2025-07-26 16:30:47] 2025-07-26 20:30:12,753 | INFO     | -- intersect: 2856339008.7258973
[2025-07-26 16:30:47] 2025-07-26 20:30:12,753 | INFO     | intersect: 2856339008.7258973
[2025-07-26 16:30:47] 2025-07-26 20:30:12,753 | INFO     | chi2: 1.6366842547421712
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | current chi2=1.6366842547421712 (change=-0.08416743391438354 %)
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | right removable region: 107
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | sum of square deviations: 390582207.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | sum of deviations: -16811071862.000002
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | mean x: 1753558471.5
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | mean y: 2250024.2592592593
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | -- intersect: 75477263863.2931
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | intersect: 75477263863.2931
[2025-07-26 16:30:47] 2025-07-26 20:30:12,754 | INFO     | chi2: 0.10729491087467846
[2025-07-26 16:30:47] 2025-07-26 20:30:12,755 | INFO     | current chi2=0.10729491087467846 (change=93.43885554365532 %)
[2025-07-26 16:30:47] 2025-07-26 20:30:12,755 | INFO     | sum of square deviations: 338804492.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,755 | INFO     | sum of deviations: -13611104948.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,755 | INFO     | mean x: 1753558624.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,755 | INFO     | mean y: 2240562.6796116503
[2025-07-26 16:30:47] 2025-07-26 20:30:12,755 | INFO     | -- intersect: 70449566460.98698
[2025-07-26 16:30:47] 2025-07-26 20:30:12,755 | INFO     | intersect: 70449566460.98698
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | chi2: 0.10208785122452237
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | current chi2=0.10208785122452237 (change=4.853035067281051 %)
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | left removable region: 20
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | sum of square deviations: 204163828.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | sum of deviations: -6813820170.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | mean x: 1753558746.0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | mean y: 2223032.2873563217
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | -- intersect: 58525978536.98286
[2025-07-26 16:30:47] 2025-07-26 20:30:12,756 | INFO     | intersect: 58525978536.98286
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | chi2: 0.07402006544911989
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | -- intersect: 58525978536.98286
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | current memory leak: -33.37 B/s (using 87 data points, chi2=0.07)
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | could have reported an average CPU frequency of 3277 MHz (7 samples)
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | ..............................
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | . Timing measurements:
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | . get job = 0 s
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | . initial setup = 5 s
[2025-07-26 16:30:47] 2025-07-26 20:30:12,757 | INFO     | . payload setup = 14 s
[2025-07-26 16:30:47] 2025-07-26 20:30:12,758 | INFO     | . stage-in = 0 s
[2025-07-26 16:30:47] 2025-07-26 20:30:12,758 | INFO     | . payload execution = 6897 s
[2025-07-26 16:30:47] 2025-07-26 20:30:12,758 | INFO     | . stage-out = 1 s
[2025-07-26 16:30:47] 2025-07-26 20:30:12,758 | INFO     | . log creation = 0 s
[2025-07-26 16:30:47] 2025-07-26 20:30:12,758 | INFO     | ..............................
[2025-07-26 16:30:47] 2025-07-26 20:30:12,953 | INFO     | 
[2025-07-26 16:30:47] 2025-07-26 20:30:12,953 | INFO     | job summary report
[2025-07-26 16:30:47] 2025-07-26 20:30:12,953 | INFO     | --------------------------------------------------
[2025-07-26 16:30:47] 2025-07-26 20:30:12,953 | INFO     | PanDA job id: 6745231654
[2025-07-26 16:30:47] 2025-07-26 20:30:12,953 | INFO     | task id: 45743349
[2025-07-26 16:30:47] 2025-07-26 20:30:12,953 | INFO     | errors: (none)
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | pilot state: finished 
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | transexitcode: 0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | exeerrorcode: 0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | exeerrordiag: 
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | exitcode: 0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | exitmsg: OK
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | cpuconsumptiontime: 36125 s
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | nevents: 400
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | neventsw: 0
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | pid: 1298076
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | pgrp: 1298076
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | corecount: 8
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | event service: False
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | sizes: {0: 2397475, 11: 2397765, 6916: 2425137, 6917: 2434135, 6921: 2434191, 6933: 2434385}
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | --------------------------------------------------
[2025-07-26 16:30:47] 2025-07-26 20:30:12,954 | INFO     | 
[2025-07-26 16:30:47] 2025-07-26 20:30:12,955 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 16:30:47] 2025-07-26 20:30:13,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:30:47] 2025-07-26 20:30:13,013 | INFO     | job 6745231654 has completed (purged errors)
[2025-07-26 16:30:47] 2025-07-26 20:30:13,014 | INFO     | overall cleanup function is called
[2025-07-26 16:30:47] 2025-07-26 20:30:14,022 | INFO     | --- collectZombieJob: --- 10, [1298076]
[2025-07-26 16:30:47] 2025-07-26 20:30:14,022 | INFO     | zombie collector waiting for pid 1298076
[2025-07-26 16:30:47] 2025-07-26 20:30:14,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:30:47] 2025-07-26 20:30:14,023 | INFO     | collected zombie processes
[2025-07-26 16:30:47] 2025-07-26 20:30:14,023 | INFO     | will attempt to kill all subprocesses of pid=1298076
[2025-07-26 16:30:47] 2025-07-26 20:30:14,668 | INFO     | process IDs to be killed: [1298076] (in reverse order)
[2025-07-26 16:30:47] 2025-07-26 20:30:14,896 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:30:47] 2025-07-26 20:30:14,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:30:47] 2025-07-26 20:30:14,948 | INFO     | did not find any defunct processes belonging to 1298076
[2025-07-26 16:30:47] 2025-07-26 20:30:14,979 | INFO     | did not find any defunct processes belonging to 1298076
[2025-07-26 16:30:47] 2025-07-26 20:30:14,980 | INFO     | ready for new job
[2025-07-26 16:30:47] 2025-07-26 20:30:14,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:30:47] 2025-07-26 20:30:14,982 | INFO     | ***************************************
[2025-07-26 16:30:47] 2025-07-26 20:30:14,982 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:30:47] 2025-07-26 20:30:14,982 | INFO     | ***************************************
[2025-07-26 16:30:47] 2025-07-26 20:30:14,982 | INFO     | 
[2025-07-26 16:30:47] 2025-07-26 20:30:15,001 | INFO     | architecture information:
[2025-07-26 16:30:47] 2025-07-26 20:30:15,002 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:30:47] 2025-07-26 20:30:15,024 | INFO     | cat /etc/os-release:
[2025-07-26 16:30:47] NAME="CentOS Linux"
[2025-07-26 16:30:47] VERSION="7 (Core)"
[2025-07-26 16:30:47] ID="centos"
[2025-07-26 16:30:47] ID_LIKE="rhel fedora"
[2025-07-26 16:30:47] VERSION_ID="7"
[2025-07-26 16:30:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:30:47] ANSI_COLOR="0;31"
[2025-07-26 16:30:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:30:47] HOME_URL="https://www.centos.org/"
[2025-07-26 16:30:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:30:47] 
[2025-07-26 16:30:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:30:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:30:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:30:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:30:47] 
[2025-07-26 16:30:47] 2025-07-26 20:30:15,025 | INFO     | ***************************************
[2025-07-26 16:30:47] 2025-07-26 20:30:15,528 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 16:30:47] 2025-07-26 20:30:15,555 | INFO     | sufficient remaining disk space (75580309504 B)
[2025-07-26 16:30:47] 2025-07-26 20:30:15,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:30:47] 2025-07-26 20:30:15,556 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:30:47] 2025-07-26 20:30:15,556 | INFO     | update_server=False
[2025-07-26 16:30:47] 2025-07-26 20:30:15,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:30:47] 2025-07-26 20:30:15,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:30:47] 2025-07-26 20:30:15,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:30:47] 2025-07-26 20:30:16,023 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 16:30:47] 2025-07-26 20:30:16,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 16:30:47] 2025-07-26 20:30:16,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:30:47] 2025-07-26 20:30:16,024 | INFO     | will abort loop
[2025-07-26 16:30:47] 2025-07-26 20:30:16,039 | INFO     | all job control threads have been joined
[2025-07-26 16:30:47] 2025-07-26 20:30:16,231 | INFO     | all payload control threads have been joined
[2025-07-26 16:30:47] 2025-07-26 20:30:16,255 | INFO     | all data control threads have been joined
[2025-07-26 16:30:47] 2025-07-26 20:30:16,562 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:16,853 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,030 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,045 | INFO     | [job] control thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,236 | INFO     | [payload] control thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,263 | INFO     | [data] control thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,343 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,343 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,384 | INFO     | [job] validate thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,603 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,818 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,837 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:17,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:30:47] 2025-07-26 20:30:17,989 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:18,972 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:19,654 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:25,711 | INFO     | job.realtimelogging is not enabled
[2025-07-26 16:30:47] 2025-07-26 20:30:26,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:30:47] 2025-07-26 20:30:27,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910283757376)>', '<ExcThread(monitor, started 139909406902016)>']
[2025-07-26 16:30:47] 2025-07-26 20:30:32,239 | INFO     | all workflow threads have been joined
[2025-07-26 16:30:47] 2025-07-26 20:30:32,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:30:47] 2025-07-26 20:30:32,240 | INFO     | traces error code: 0
[2025-07-26 16:30:47] 2025-07-26 20:30:32,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:30:47] 2025-07-26 20:30:46,359 | INFO     | PID=1276285 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 16:30:47] 2025-07-26 20:30:46,360 | INFO     | .. there are 45 such processes running
[2025-07-26 16:30:47] 2025-07-26 20:30:46,361 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:30:47] 2025-07-26 20:30:46,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:30:47] 2025-07-26 20:30:46,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:30:47] 2025-07-26 20:30:46,362 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:30:47] 2025-07-26 20:30:46,362 | INFO     | [monitor] control thread has ended
[2025-07-26 16:30:47] 2025-07-26 20:30:46,639 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:30:47] 2025-07-26 20:30:46,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:30:47] 2025-07-26 20:30:46,669 [wrapper] pilotpid: 1276285
[2025-07-26 16:30:47] 2025-07-26 20:30:46,675 [wrapper] Pilot exit status: 0
[2025-07-26 16:30:47] 2025-07-26 20:30:46,695 [wrapper] pandaids: 6745231654
[2025-07-26 16:30:47] 2025-07-26 20:30:46,879 [wrapper] cleanup supervisor_pilot 3441208 1276286
[2025-07-26 16:30:47] 2025-07-26 20:30:46,892 [wrapper] Test setup, not cleaning
[2025-07-26 16:30:47] 2025-07-26 20:30:46,895 [wrapper] apfmon messages muted
[2025-07-26 16:30:47] 2025-07-26 20:30:46,898 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:30:47] 2025-07-26 20:30:46,901 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:30:47]  *** Error codes and diagnostics ***
[2025-07-26 16:30:47]     "exeErrorCode": 0,
[2025-07-26 16:30:47]     "exeErrorDiag": "",
[2025-07-26 16:30:47]     "pilotErrorCode": 0,
[2025-07-26 16:30:47]     "pilotErrorDiag": "",
[2025-07-26 16:30:47]  *** Listing of results directory ***
[2025-07-26 16:30:47] total 357928
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 11:50 pilot3.tar.gz
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 12:00 queuedata.json
[2025-07-26 16:30:47] -rwx------. 1 boincer umatlas     36292 Jul 26 12:00 runpilot2-wrapper.sh
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas       100 Jul 26 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:30:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 14:33 run_atlas
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas       105 Jul 26 14:33 job.xml
[2025-07-26 16:30:47] -rw-r--r--. 2 boincer umatlas 146389974 Jul 26 14:33 EVNT.45743347._002316.pool.root.1
[2025-07-26 16:30:47] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 14:33 input.tar.gz
[2025-07-26 16:30:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 14:33 start_atlas.sh
[2025-07-26 16:30:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 14:33 shared
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas         0 Jul 26 14:33 boinc_lockfile
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 14:33 pandaJob.out
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas    980125 Jul 26 14:34 agis_schedconf.cvmfs.json
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas   1593052 Jul 26 14:34 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:30:47] drwx------. 4 boincer umatlas      4096 Jul 26 14:34 pilot3
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas 214321755 Jul 26 16:29 HITS.45743349._040542.pool.root.1
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas       529 Jul 26 16:29 boinc_task_state.xml
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas      1037 Jul 26 16:29 memory_monitor_summary.json
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas    320423 Jul 26 16:29 log.45743349._040542.job.log.tgz.1
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas      7781 Jul 26 16:30 heartbeat.json
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas      6932 Jul 26 16:30 init_data.xml
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas        95 Jul 26 16:30 pilot_heartbeat.json
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas       823 Jul 26 16:30 pilotlog.txt
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 16:30 boinc_mmap_file
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas    645466 Jul 26 16:30 log.45743349._040542.job.log.1
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas        27 Jul 26 16:30 wrapper_checkpoint.txt
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas       357 Jul 26 16:30 output.list
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas       620 Jul 26 16:30 runtime_log
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas    983040 Jul 26 16:30 result.tar.gz
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 16:30 runtime_log.err
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas       653 Jul 26 16:30 339MDmxUwz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2VSLDmmZa0in.diag
[2025-07-26 16:30:47] -rw-r--r--. 1 boincer umatlas     21102 Jul 26 16:30 stderr.txt
[2025-07-26 16:30:47] HITS file was successfully produced:
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas 214321755 Jul 26 16:29 shared/HITS.pool.root.1
[2025-07-26 16:30:47]  *** Contents of shared directory: ***
[2025-07-26 16:30:47] total 353776
[2025-07-26 16:30:47] -rw-r--r--. 2 boincer umatlas 146389974 Jul 26 14:33 ATLAS.root_0
[2025-07-26 16:30:47] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 14:33 input.tar.gz
[2025-07-26 16:30:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 14:33 start_atlas.sh
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas 214321755 Jul 26 16:29 HITS.pool.root.1
[2025-07-26 16:30:47] -rw-------. 1 boincer umatlas    983040 Jul 26 16:30 result.tar.gz
16:30:48 (1267893): run_atlas exited; CPU time 36455.667490
16:30:48 (1267893): called boinc_finish(0)

</stderr_txt>
]]>

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