Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 03:43:59 (11680): Detected: vboxwrapper 26206
2025-07-27 03:43:59 (11680): Detected: BOINC client v8.2.5
2025-07-27 03:44:00 (11680): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-07-27 03:44:00 (11680): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 03:44:00 (11680): Create VM. (boinc_bfc7cea880cdc6fd, slot#3)
2025-07-27 03:44:01 (11680): Setting Memory Size for VM. (4096MB)
2025-07-27 03:44:01 (11680): Setting CPU Count for VM. (1)
2025-07-27 03:44:01 (11680): Setting Chipset Options for VM.
2025-07-27 03:44:02 (11680): Setting Graphics Controller Options for VM.
2025-07-27 03:44:02 (11680): Setting Boot Options for VM.
2025-07-27 03:44:02 (11680): Setting Network Configuration for NAT.
2025-07-27 03:44:03 (11680): Enabling VM Network Access.
2025-07-27 03:44:03 (11680): Disabling USB Support for VM.
2025-07-27 03:44:03 (11680): Disabling COM Port Support for VM.
2025-07-27 03:44:03 (11680): Disabling LPT Port Support for VM.
2025-07-27 03:44:04 (11680): Disabling Audio Support for VM.
2025-07-27 03:44:04 (11680): Disabling Clipboard Support for VM.
2025-07-27 03:44:04 (11680): Disabling Drag and Drop Support for VM.
2025-07-27 03:44:04 (11680): Adding storage controller(s) to VM.
2025-07-27 03:44:05 (11680): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 03:44:05 (11680): Adding VirtualBox Guest Additions to VM.
2025-07-27 03:44:05 (11680): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 03:44:06 (11680): forwarding host port 63814 to guest port 80
2025-07-27 03:44:06 (11680): Enabling remote desktop for VM.
2025-07-27 03:44:06 (11680): Required extension pack not installed, remote desktop not enabled.
2025-07-27 03:44:06 (11680): Enabling shared directory for VM.
2025-07-27 03:44:07 (11680): Starting VM using VBoxManage interface. (boinc_bfc7cea880cdc6fd, slot#3)
2025-07-27 03:44:15 (11680): Successfully started VM. (PID = '5816')
2025-07-27 03:44:15 (11680): Reporting VM Process ID to BOINC.
2025-07-27 03:44:15 (11680): Guest Log: BIOS: VirtualBox 7.1.8
2025-07-27 03:44:15 (11680): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 03:44:15 (11680): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 03:44:15 (11680): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 03:44:15 (11680): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 03:44:15 (11680): Detected: Web Application Enabled (http://localhost:63814)
2025-07-27 03:44:15 (11680): Preference change detected
2025-07-27 03:44:15 (11680): Setting CPU throttle for VM. (100%)
2025-07-27 03:44:16 (11680): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 03:44:17 (11680): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 03:44:17 (11680): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 03:44:20 (11680): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 03:44:20 (11680): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 03:44:20 (11680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 03:44:27 (11680): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 03:44:27 (11680): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 03:44:45 (11680): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 03:44:45 (11680): Guest Log: 00:00:00.000289 main     Log opened 2025-07-27T03:44:43.383705000Z
2025-07-27 03:44:45 (11680): Guest Log: 00:00:00.000597 main     OS Product: Linux
2025-07-27 03:44:45 (11680): Guest Log: 00:00:00.000664 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 03:44:45 (11680): Guest Log: 00:00:00.000713 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 03:44:45 (11680): Guest Log: 00:00:00.000762 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 03:44:45 (11680): Guest Log: 00:00:00.000764 main     Process ID: 1255
2025-07-27 03:44:45 (11680): Guest Log: 00:00:00.000764 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 03:44:45 (11680): Guest Log: 00:00:00.005196 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 03:44:45 (11680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 03:44:45 (11680): Guest Log: [INFO] Mounting shared directory
2025-07-27 03:44:45 (11680): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 03:44:50 (11680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 03:44:50 (11680): Guest Log: [INFO] Detected branch: prod
2025-07-27 03:44:50 (11680): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 03:44:50 (11680): Guest Log: Copying input files
2025-07-27 03:44:52 (11680): Guest Log: Copied input files into RunAtlas.
2025-07-27 03:44:52 (11680): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-07-27 03:44:55 (11680): Guest Log: 00:00:10.041736 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 911 375 000ns (GuestNow=1 753 580 695 511 869 000 ns GuestLast=1 753 587 883 423 244 000 ns fSetTimeLastLoop=true )
2025-07-27 03:45:01 (11680): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 03:45:01 (11680): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 03:45:01 (11680): Guest Log: 2.6.3.0 1524 0 31548 148795 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-07-27 03:45:02 (11680): Guest Log: copied the webapp to /var/www
2025-07-27 03:45:02 (11680): Guest Log: core_number=1
2025-07-27 03:45:03 (11680): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 03:45:03 (11680): Guest Log:  *** Starting ATLAS job. (PandaID=6745227366 taskID=45743349) ***
2025-07-27 05:24:21 (11680): Status Report: Elapsed Time: '6000.000000'
2025-07-27 05:24:21 (11680): Status Report: CPU Time: '5943.046875'
2025-07-27 07:04:27 (11680): Status Report: Elapsed Time: '12000.000000'
2025-07-27 07:04:27 (11680): Status Report: CPU Time: '11921.515625'
2025-07-27 08:44:33 (11680): Status Report: Elapsed Time: '18000.000000'
2025-07-27 08:44:33 (11680): Status Report: CPU Time: '17896.578125'
2025-07-27 10:24:40 (11680): Status Report: Elapsed Time: '24000.000000'
2025-07-27 10:24:40 (11680): Status Report: CPU Time: '23869.953125'
2025-07-27 12:04:45 (11680): Status Report: Elapsed Time: '30000.000000'
2025-07-27 12:04:45 (11680): Status Report: CPU Time: '29847.500000'
2025-07-27 13:44:51 (11680): Status Report: Elapsed Time: '36000.000000'
2025-07-27 13:44:51 (11680): Status Report: CPU Time: '35823.484375'
2025-07-27 15:24:57 (11680): Status Report: Elapsed Time: '42000.000000'
2025-07-27 15:24:57 (11680): Status Report: CPU Time: '41799.750000'
2025-07-27 17:05:03 (11680): Status Report: Elapsed Time: '48000.000000'
2025-07-27 17:05:03 (11680): Status Report: CPU Time: '47778.265625'
2025-07-27 18:45:09 (11680): Status Report: Elapsed Time: '54000.000000'
2025-07-27 18:45:09 (11680): Status Report: CPU Time: '53757.859375'
2025-07-27 20:25:14 (11680): Status Report: Elapsed Time: '60000.000000'
2025-07-27 20:25:14 (11680): Status Report: CPU Time: '59736.484375'
2025-07-27 21:10:05 (11680): Guest Log:  *** Job finished ***
2025-07-27 21:10:05 (11680): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:09:45,806 | INFO     | all workflow threads have been joined
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:09:45,807 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:09:45,807 | INFO     | traces error code: 0
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:09:45,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,667 | INFO     | PID=5786 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,668 | INFO     | found 0 job(s) in 20 queues
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,668 | INFO     | [monitor] control thread has ended
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,750 [wrapper] ==== pilot stdout END ====
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,756 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,762 [wrapper] pilotpid: 5786
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,766 [wrapper] Pilot exit status: 0
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,820 [wrapper] pandaids: 6745227366
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,842 [wrapper] cleanup supervisor_pilot 25062 5787
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,847 [wrapper] Test setup, not cleaning
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,851 [wrapper] apfmon messages muted
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,856 [wrapper] ==== wrapper stdout END ====
2025-07-27 21:10:05 (11680): Guest Log: 2025-07-27 19:10:04,861 [wrapper] ==== wrapper stderr END ====
2025-07-27 21:10:05 (11680): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 21:10:05 (11680): Guest Log:     "exeErrorCode": 0,
2025-07-27 21:10:05 (11680): Guest Log:     "exeErrorDiag": "",
2025-07-27 21:10:05 (11680): Guest Log:     "pilotErrorCode": 0,
2025-07-27 21:10:05 (11680): Guest Log:     "pilotErrorDiag": "",
2025-07-27 21:10:05 (11680): Guest Log:  *** Listing of results directory ***
2025-07-27 21:10:05 (11680): Guest Log: total 221516
2025-07-27 21:10:05 (11680): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 26 12:44 pilot3.tar.gz
2025-07-27 21:10:05 (11680): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 26 13:05 queuedata.json
2025-07-27 21:10:05 (11680): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 26 13:06 runpilot2-wrapper.sh
2025-07-27 21:10:05 (11680): Guest Log: -rwxr-xr-x. 1 atlas atlas      9490 Jul 27 01:44 init_data.xml
2025-07-27 21:10:05 (11680): Guest Log: -rwxr-xr-x. 1 atlas atlas    542899 Jul 27 01:44 input.tar.gz
2025-07-27 21:10:05 (11680): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 27 01:44 start_atlas.sh
2025-07-27 21:10:05 (11680): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 01:44 EVNT.45743347._002197.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 21:10:05 (11680): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 27 01:45 pandaJob.out
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 27 01:45 agis_schedconf.cvmfs.json
2025-07-27 21:10:05 (11680): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 01:45 pilot3
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas 210826423 Jul 27 19:08 HITS.45743349._038368.pool.root.1
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas      1021 Jul 27 19:09 memory_monitor_summary.json
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 19:09 agis_ddmendpoints.agis.ALL.json
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas    713395 Jul 27 19:09 log.45743349._038368.job.log.tgz.1
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas      7772 Jul 27 19:09 heartbeat.json
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas       744 Jul 27 19:10 pilotlog.txt
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 19:10 pilot_heartbeat.json
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas   5383869 Jul 27 19:10 log.45743349._038368.job.log.1
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 19:10 output.list
2025-07-27 21:10:05 (11680): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 19:10 runtime_log
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas   6113280 Jul 27 19:10 result.tar.gz
2025-07-27 21:10:05 (11680): Guest Log: -rw-r--r--. 1 atlas atlas      8460 Jul 27 19:10 runtime_log.err
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas       656 Jul 27 19:10 psnKDmlmtz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNCSLDmmxDEln.diag
2025-07-27 21:10:05 (11680): Guest Log: Looking for outputfile HITS.45743349._038368.pool.root.1
2025-07-27 21:10:05 (11680): Guest Log: HITS file was successfully produced
2025-07-27 21:10:05 (11680): Guest Log: -rw-------. 1 atlas atlas 210826423 Jul 27 19:08 /home/atlas/RunAtlas/HITS.45743349._038368.pool.root.1
2025-07-27 21:10:07 (11680): Guest Log: Successfully finished the ATLAS job!
2025-07-27 21:10:07 (11680): Guest Log: Copying the results back to the shared directory!
2025-07-27 21:10:07 (11680): Guest Log:  *** Contents of shared directory: ***
2025-07-27 21:10:07 (11680): Guest Log: total 440552
2025-07-27 21:10:07 (11680): Guest Log: -rwxrwxrwx. 1 root root 233603879 Jul 27 01:43 ATLAS.root_0
2025-07-27 21:10:07 (11680): Guest Log: -rwxrwxrwx. 1 root root 210826423 Jul 27 19:10 HITS.pool.root.1
2025-07-27 21:10:07 (11680): Guest Log: -rwxrwxrwx. 1 root root      9490 Jul 27 01:43 init_data.xml
2025-07-27 21:10:07 (11680): Guest Log: -rwxrwxrwx. 1 root root    542899 Jul 26 18:44 input.tar.gz
2025-07-27 21:10:07 (11680): Guest Log: -rwxrwxrwx. 1 root root   6113280 Jul 27 19:10 result.tar.gz
2025-07-27 21:10:07 (11680): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 26 18:44 start_atlas.sh
2025-07-27 21:10:07 (11680): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 21:10:07 (11680): VM Completion File Detected.
2025-07-27 21:10:07 (11680): Powering off VM.
2025-07-27 21:10:08 (11680): Successfully stopped VM.
2025-07-27 21:10:08 (11680): Deregistering VM. (boinc_bfc7cea880cdc6fd, slot#3)
2025-07-27 21:10:08 (11680): Removing network bandwidth throttle group from VM.
2025-07-27 21:10:08 (11680): Removing VM from VirtualBox.
21:10:13 (11680): called boinc_finish(0)

</stderr_txt>
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