Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:43:27 (868841): wrapper (7.7.26015): starting
14:43:27 (868841): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 14:43:27] Arguments: --nthreads 8
[2025-07-26 14:43:27] Threads: 8
[2025-07-26 14:43:27] Checking for CVMFS
[2025-07-26 14:43:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 14:43:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 14:43:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 14:43:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 14:43:28] 2.13.1.0 285388 7310 101432 148786 3 188 10956866 40960001 12923 16776704 0 96894409 99.999 295062 30102 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 14:43:28] CVMFS is ok
[2025-07-26 14:43:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 14:43:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 14:43:28] Further information can be found at the LHC@home message board.
[2025-07-26 14:43:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 14:43:28] Checking for apptainer binary...
[2025-07-26 14:43:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 14:43:28] Running /usr/bin/apptainer --version
[2025-07-26 14:43:28] apptainer version 1.4.1-1.el9
[2025-07-26 14:43:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 14:43:28] c-208-36.aglt2.org
[2025-07-26 14:43:28] apptainer works
[2025-07-26 14:43:28] Set ATHENA_PROC_NUMBER=8
[2025-07-26 14:43:28] Set ATHENA_CORE_NUMBER=8
[2025-07-26 14:43:28] Starting ATLAS job with PandaID=6745227344
[2025-07-26 14:43:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 15:39:37]  *** The last 200 lines of the pilot log: ***
[2025-07-26 15:39:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 15:39:37]  replicas=None
[2025-07-26 15:39:37]  scope=mc23_13p6TeV
[2025-07-26 15:39:37]  status=None
[2025-07-26 15:39:37]  status_code=0
[2025-07-26 15:39:37]  storage_token=
[2025-07-26 15:39:37]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6745227344/log.45743349._038347.job.log.tgz.1
[2025-07-26 15:39:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/b0/log.45743349._038347.job.log.tgz.1
[2025-07-26 15:39:37]  workdir=None
[2025-07-26 15:39:37] ]
[2025-07-26 15:39:37] 2025-07-26 19:38:55,152 | INFO     | transferring file log.45743349._038347.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6745227344/log.45743349._038347.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 15:39:37] 2025-07-26 19:38:55,152 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6745227344/log.45743349._038347.job.log.tgz.1 /tmp/boinchome/slots/6/log.45743349._038347.job
[2025-07-26 15:39:37] 2025-07-26 19:38:55,169 | INFO     | adding to output.list: log.45743349._038347.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/b0/log.45743349._038347.job.log.tg
[2025-07-26 15:39:37] 2025-07-26 19:38:55,170 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 15:39:37] 2025-07-26 19:38:55,170 | INFO     | summary of transferred files:
[2025-07-26 15:39:37] 2025-07-26 19:38:55,170 | INFO     |  -- lfn=log.45743349._038347.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 15:39:37] 2025-07-26 19:38:55,170 | INFO     | stage-out finished correctly
[2025-07-26 15:39:37] 2025-07-26 19:38:55,823 | INFO     | monitor loop #246: job 0:6745227344 is in state 'finished'
[2025-07-26 15:39:37] 2025-07-26 19:38:55,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 15:39:37] 2025-07-26 19:38:58,243 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 15:39:37] 2025-07-26 19:38:58,325 | INFO     | monitor loop #247: job 0:6745227344 is in state 'finished'
[2025-07-26 15:39:37] 2025-07-26 19:38:58,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 15:39:37] 2025-07-26 19:39:00,123 | INFO     | job 6745227344 has state=finished
[2025-07-26 15:39:37] 2025-07-26 19:39:00,124 | INFO     | preparing for final server update for job 6745227344 in state='finished'
[2025-07-26 15:39:37] 2025-07-26 19:39:00,124 | INFO     | this job has now completed (state=finished)
[2025-07-26 15:39:37] 2025-07-26 19:39:00,124 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 15:39:37] 2025-07-26 19:39:00,124 | INFO     | log transfer has been attempted: DONE
[2025-07-26 15:39:37] 2025-07-26 19:39:00,124 | INFO     | job 6745227344 has finished - writing final server update
[2025-07-26 15:39:37] 2025-07-26 19:39:00,125 | INFO     | total number of processed events: 400 (read)
[2025-07-26 15:39:37] 2025-07-26 19:39:00,125 | INFO     | executing command: lscpu
[2025-07-26 15:39:37] 2025-07-26 19:39:00,179 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 15:39:37] 2025-07-26 19:39:00,828 | INFO     | monitor loop #248: job 0:6745227344 is in state 'finished'
[2025-07-26 15:39:37] 2025-07-26 19:39:00,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 15:39:37] 2025-07-26 19:39:03,331 | INFO     | monitor loop #249: job 0:6745227344 is in state 'finished'
[2025-07-26 15:39:37] 2025-07-26 19:39:03,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 15:39:37] 2025-07-26 19:39:03,966 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 15:39:37] 2025-07-26 19:39:03,971 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.7834687500003
[2025-07-26 15:39:37] 2025-07-26 19:39:03,985 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6745227344/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 15:39:37] 2025-07-26 19:39:03,985 | INFO     | extracted standard info from prmon json
[2025-07-26 15:39:37] 2025-07-26 19:39:03,985 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 15:39:37] 2025-07-26 19:39:03,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 15:39:37] 2025-07-26 19:39:03,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 15:39:37] 2025-07-26 19:39:03,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 15:39:37] 2025-07-26 19:39:03,987 | INFO     | fitting pss+swap vs Time
[2025-07-26 15:39:37] 2025-07-26 19:39:03,987 | INFO     | sum of square deviations: 32179208.0
[2025-07-26 15:39:37] 2025-07-26 19:39:03,987 | INFO     | sum of deviations: -155666327.0
[2025-07-26 15:39:37] 2025-07-26 19:39:03,987 | INFO     | mean x: 1753557150.0
[2025-07-26 15:39:37] 2025-07-26 19:39:03,987 | INFO     | mean y: 2532836.4468085105
[2025-07-26 15:39:37] 2025-07-26 19:39:03,987 | INFO     | -- intersect: 8485333305.777442
[2025-07-26 15:39:37] 2025-07-26 19:39:03,987 | INFO     | intersect: 8485333305.777442
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | chi2: 0.0006458065853503805
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | -- intersect: 8485333305.777442
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | current memory leak: -4.84 B/s (using 47 data points, chi2=0.00)
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | could have reported an average CPU frequency of 3784 MHz (5 samples)
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | ..............................
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | . Timing measurements:
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | . get job = 0 s
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | . initial setup = 2 s
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | . payload setup = 5 s
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | . stage-in = 0 s
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | . payload execution = 3294 s
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | . stage-out = 0 s
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | . log creation = 0 s
[2025-07-26 15:39:37] 2025-07-26 19:39:03,988 | INFO     | ..............................
[2025-07-26 15:39:37] 2025-07-26 19:39:04,046 | INFO     | 
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | job summary report
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | --------------------------------------------------
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | PanDA job id: 6745227344
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | task id: 45743349
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | errors: (none)
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | pilot state: finished 
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | transexitcode: 0
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | exeerrorcode: 0
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | exeerrordiag: 
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | exitcode: 0
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | exitmsg: OK
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | cpuconsumptiontime: 24317 s
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | nevents: 400
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | neventsw: 0
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | pid: 878878
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | pgrp: 878878
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | corecount: 8
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | event service: False
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | sizes: {0: 2396647, 1: 2397503, 5: 2397765, 11: 2397821, 3303: 2432374, 3306: 2432374, 3312: 2432728}
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | --------------------------------------------------
[2025-07-26 15:39:37] 2025-07-26 19:39:04,047 | INFO     | 
[2025-07-26 15:39:37] 2025-07-26 19:39:04,048 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 15:39:37] 2025-07-26 19:39:04,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,066 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 15:39:37] 2025-07-26 19:39:04,066 | INFO     | job 6745227344 has completed (purged errors)
[2025-07-26 15:39:37] 2025-07-26 19:39:04,066 | INFO     | overall cleanup function is called
[2025-07-26 15:39:37] 2025-07-26 19:39:05,073 | INFO     | --- collectZombieJob: --- 10, [878878]
[2025-07-26 15:39:37] 2025-07-26 19:39:05,074 | INFO     | zombie collector waiting for pid 878878
[2025-07-26 15:39:37] 2025-07-26 19:39:05,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 15:39:37] 2025-07-26 19:39:05,074 | INFO     | collected zombie processes
[2025-07-26 15:39:37] 2025-07-26 19:39:05,074 | INFO     | will attempt to kill all subprocesses of pid=878878
[2025-07-26 15:39:37] 2025-07-26 19:39:05,405 | INFO     | process IDs to be killed: [878878] (in reverse order)
[2025-07-26 15:39:37] 2025-07-26 19:39:05,516 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 15:39:37] 2025-07-26 19:39:05,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 15:39:37] 2025-07-26 19:39:05,532 | INFO     | did not find any defunct processes belonging to 878878
[2025-07-26 15:39:37] 2025-07-26 19:39:05,545 | INFO     | did not find any defunct processes belonging to 878878
[2025-07-26 15:39:37] 2025-07-26 19:39:05,546 | INFO     | ready for new job
[2025-07-26 15:39:37] 2025-07-26 19:39:05,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 15:39:37] 2025-07-26 19:39:05,547 | INFO     | ***************************************
[2025-07-26 15:39:37] 2025-07-26 19:39:05,547 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 15:39:37] 2025-07-26 19:39:05,547 | INFO     | ***************************************
[2025-07-26 15:39:37] 2025-07-26 19:39:05,547 | INFO     | 
[2025-07-26 15:39:37] 2025-07-26 19:39:05,551 | INFO     | architecture information:
[2025-07-26 15:39:37] 2025-07-26 19:39:05,551 | INFO     | executing command: cat /etc/os-release
[2025-07-26 15:39:37] 2025-07-26 19:39:05,567 | INFO     | cat /etc/os-release:
[2025-07-26 15:39:37] NAME="CentOS Linux"
[2025-07-26 15:39:37] VERSION="7 (Core)"
[2025-07-26 15:39:37] ID="centos"
[2025-07-26 15:39:37] ID_LIKE="rhel fedora"
[2025-07-26 15:39:37] VERSION_ID="7"
[2025-07-26 15:39:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 15:39:37] ANSI_COLOR="0;31"
[2025-07-26 15:39:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 15:39:37] HOME_URL="https://www.centos.org/"
[2025-07-26 15:39:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 15:39:37] 
[2025-07-26 15:39:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 15:39:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 15:39:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 15:39:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 15:39:37] 
[2025-07-26 15:39:37] 2025-07-26 19:39:05,567 | INFO     | ***************************************
[2025-07-26 15:39:37] 2025-07-26 19:39:06,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-07-26 15:39:37] 2025-07-26 19:39:06,088 | INFO     | sufficient remaining disk space (165602656256 B)
[2025-07-26 15:39:37] 2025-07-26 19:39:06,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 15:39:37] 2025-07-26 19:39:06,088 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 15:39:37] 2025-07-26 19:39:06,088 | INFO     | update_server=False
[2025-07-26 15:39:37] 2025-07-26 19:39:06,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 15:39:37] 2025-07-26 19:39:06,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 15:39:37] 2025-07-26 19:39:06,559 | INFO     | all payload control threads have been joined
[2025-07-26 15:39:37] 2025-07-26 19:39:06,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:39:37] 2025-07-26 19:39:06,839 | INFO     | aborting loop
[2025-07-26 15:39:37] 2025-07-26 19:39:06,931 | INFO     | all data control threads have been joined
[2025-07-26 15:39:37] 2025-07-26 19:39:07,089 | INFO     | [job] retrieve thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:07,498 | INFO     | [payload] failed_post thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:07,565 | INFO     | [payload] control thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:07,627 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:07,661 | INFO     | all job control threads have been joined
[2025-07-26 15:39:37] 2025-07-26 19:39:07,845 | INFO     | [job] job monitor thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:07,862 | INFO     | [data] copytool_in thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:07,936 | INFO     | [data] control thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:08,070 | INFO     | [job] validate thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:08,094 | INFO     | [data] copytool_out thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:08,194 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:08,372 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:08,473 | INFO     | [payload] validate_post thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:08,666 | INFO     | [job] control thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:08,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 15:39:37] 2025-07-26 19:39:09,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:39:37] 2025-07-26 19:39:10,062 | INFO     | [job] queue monitor thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:12,807 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:16,643 | INFO     | job.realtimelogging is not enabled
[2025-07-26 15:39:37] 2025-07-26 19:39:17,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 15:39:37] 2025-07-26 19:39:18,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338644023104)>', '<ExcThread(monitor, started 140338140256000)>']
[2025-07-26 15:39:37] 2025-07-26 19:39:23,968 | INFO     | all workflow threads have been joined
[2025-07-26 15:39:37] 2025-07-26 19:39:23,969 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 15:39:37] 2025-07-26 19:39:23,969 | INFO     | traces error code: 0
[2025-07-26 15:39:37] 2025-07-26 19:39:23,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 15:39:37] 2025-07-26 19:39:37,122 | INFO     | PID=872445 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 15:39:37] 2025-07-26 19:39:37,122 | INFO     | .. there are 16 such processes running
[2025-07-26 15:39:37] 2025-07-26 19:39:37,122 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 15:39:37] 2025-07-26 19:39:37,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 15:39:37] 2025-07-26 19:39:37,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 15:39:37] 2025-07-26 19:39:37,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 15:39:37] 2025-07-26 19:39:37,122 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 15:39:37] 2025-07-26 19:39:37,122 | INFO     | [monitor] control thread has ended
[2025-07-26 15:39:37] 2025-07-26 19:39:37,208 [wrapper] ==== pilot stdout END ====
[2025-07-26 15:39:37] 2025-07-26 19:39:37,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 15:39:37] 2025-07-26 19:39:37,213 [wrapper] pilotpid: 872445
[2025-07-26 15:39:37] 2025-07-26 19:39:37,215 [wrapper] Pilot exit status: 0
[2025-07-26 15:39:37] 2025-07-26 19:39:37,226 [wrapper] pandaids: 6745227344
[2025-07-26 15:39:37] 2025-07-26 19:39:37,308 [wrapper] cleanup supervisor_pilot 1152716 872446
[2025-07-26 15:39:37] 2025-07-26 19:39:37,312 [wrapper] Test setup, not cleaning
[2025-07-26 15:39:37] 2025-07-26 19:39:37,315 [wrapper] apfmon messages muted
[2025-07-26 15:39:37] 2025-07-26 19:39:37,319 [wrapper] ==== wrapper stdout END ====
[2025-07-26 15:39:37] 2025-07-26 19:39:37,322 [wrapper] ==== wrapper stderr END ====
[2025-07-26 15:39:37]  *** Error codes and diagnostics ***
[2025-07-26 15:39:37]     "exeErrorCode": 0,
[2025-07-26 15:39:37]     "exeErrorDiag": "",
[2025-07-26 15:39:37]     "pilotErrorCode": 0,
[2025-07-26 15:39:37]     "pilotErrorDiag": "",
[2025-07-26 15:39:37]  *** Listing of results directory ***
[2025-07-26 15:39:37] total 437024
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 08:44 pilot3.tar.gz
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 09:05 queuedata.json
[2025-07-26 15:39:37] -rwx------. 1 boincer umatlas     36292 Jul 26 09:06 runpilot2-wrapper.sh
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas       100 Jul 26 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 15:39:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 14:43 run_atlas
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas       105 Jul 26 14:43 job.xml
[2025-07-26 15:39:37] -rw-r--r--. 2 boincer umatlas 229852328 Jul 26 14:43 EVNT.45743347._002196.pool.root.1
[2025-07-26 15:39:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 14:43 start_atlas.sh
[2025-07-26 15:39:37] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 14:43 shared
[2025-07-26 15:39:37] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 14:43 input.tar.gz
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas         0 Jul 26 14:43 boinc_lockfile
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 14:43 pandaJob.out
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas    980125 Jul 26 14:43 agis_schedconf.cvmfs.json
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas   1593052 Jul 26 14:43 agis_ddmendpoints.agis.ALL.json
[2025-07-26 15:39:37] drwx------. 4 boincer umatlas      4096 Jul 26 14:43 pilot3
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 15:28 init_data.xml
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas       529 Jul 26 15:38 boinc_task_state.xml
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas 212491172 Jul 26 15:38 HITS.45743349._038347.pool.root.1
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas        95 Jul 26 15:38 pilot_heartbeat.json
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas      1030 Jul 26 15:38 memory_monitor_summary.json
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas    300182 Jul 26 15:38 log.45743349._038347.job.log.tgz.1
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas      7765 Jul 26 15:39 heartbeat.json
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 15:39 boinc_mmap_file
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas        27 Jul 26 15:39 wrapper_checkpoint.txt
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas       892 Jul 26 15:39 pilotlog.txt
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas    342642 Jul 26 15:39 log.45743349._038347.job.log.1
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas       357 Jul 26 15:39 output.list
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas       620 Jul 26 15:39 runtime_log
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas    665600 Jul 26 15:39 result.tar.gz
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 15:39 runtime_log.err
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas       651 Jul 26 15:39 hFNKDmlmtz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2BSLDmNyKwVo.diag
[2025-07-26 15:39:37] -rw-r--r--. 1 boincer umatlas     21852 Jul 26 15:39 stderr.txt
[2025-07-26 15:39:37] HITS file was successfully produced:
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas 212491172 Jul 26 15:38 shared/HITS.pool.root.1
[2025-07-26 15:39:37]  *** Contents of shared directory: ***
[2025-07-26 15:39:37] total 433188
[2025-07-26 15:39:37] -rw-r--r--. 2 boincer umatlas 229852328 Jul 26 14:43 ATLAS.root_0
[2025-07-26 15:39:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 14:43 start_atlas.sh
[2025-07-26 15:39:37] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 14:43 input.tar.gz
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas 212491172 Jul 26 15:38 HITS.pool.root.1
[2025-07-26 15:39:37] -rw-------. 1 boincer umatlas    665600 Jul 26 15:39 result.tar.gz
15:39:39 (868841): run_atlas exited; CPU time 24377.521284
15:39:39 (868841): called boinc_finish(0)

</stderr_txt>
]]>

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