Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
16:49:44 (1744899): wrapper (7.7.26015): starting
16:49:44 (1744899): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 16:49:44] Arguments: --nthreads 12
[2025-07-29 16:49:44] Threads: 12
[2025-07-29 16:49:44] Checking for CVMFS
[2025-07-29 16:49:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 16:49:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 16:49:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 16:49:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 16:49:48] 2.13.0.0 1164766 10803 94240 148893 1 188 4057868 4096001 14689 130560 0 118574108 99.999 397183 204 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-29 16:49:48] CVMFS is ok
[2025-07-29 16:49:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 16:49:48] Checking for apptainer binary...
[2025-07-29 16:49:48] apptainer is not installed, using version from CVMFS
[2025-07-29 16:49:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 16:50:27] epyc7v12
[2025-07-29 16:50:27] apptainer works
[2025-07-29 16:50:27] Set ATHENA_PROC_NUMBER=12
[2025-07-29 16:50:27] Set ATHENA_CORE_NUMBER=12
[2025-07-29 16:50:27] Starting ATLAS job with PandaID=6745227332
[2025-07-29 16:50:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31421/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 19:42:00]  *** The last 200 lines of the pilot log: ***
[2025-07-29 19:42:00] 2025-07-29 19:41:19,507 | INFO     | mean y: 2448759.88590604
[2025-07-29 19:42:00] 2025-07-29 19:41:19,507 | INFO     | -- intersect: -210852720521.91333
[2025-07-29 19:42:00] 2025-07-29 19:41:19,507 | INFO     | intersect: -210852720521.91333
[2025-07-29 19:42:00] 2025-07-29 19:41:19,507 | INFO     | chi2: 11.786584951486482
[2025-07-29 19:42:00] 2025-07-29 19:41:19,508 | INFO     | sum of square deviations: 925900536.3263888
[2025-07-29 19:42:00] 2025-07-29 19:41:19,509 | INFO     | sum of deviations: 129432426407.18752
[2025-07-29 19:42:00] 2025-07-29 19:41:19,509 | INFO     | mean x: 1753813198.6597223
[2025-07-29 19:42:00] 2025-07-29 19:41:19,509 | INFO     | mean y: 2457637.1875
[2025-07-29 19:42:00] 2025-07-29 19:41:19,509 | INFO     | -- intersect: -245164586620.20868
[2025-07-29 19:42:00] 2025-07-29 19:41:19,509 | INFO     | intersect: -245164586620.20868
[2025-07-29 19:42:00] 2025-07-29 19:41:19,509 | INFO     | chi2: 11.069353649952996
[2025-07-29 19:42:00] 2025-07-29 19:41:19,509 | INFO     | current chi2=11.069353649952996 (change=6.085149383690069 %)
[2025-07-29 19:42:00] 2025-07-29 19:41:19,509 | INFO     | right removable region: 143
[2025-07-29 19:42:00] 2025-07-29 19:41:19,510 | INFO     | sum of square deviations: 925920180.9375
[2025-07-29 19:42:00] 2025-07-29 19:41:19,510 | INFO     | sum of deviations: 68618714237.68749
[2025-07-29 19:42:00] 2025-07-29 19:41:19,510 | INFO     | mean x: 1753813503.6875
[2025-07-29 19:42:00] 2025-07-29 19:41:19,515 | INFO     | mean y: 2532319.326388889
[2025-07-29 19:42:00] 2025-07-29 19:41:19,515 | INFO     | -- intersect: -129970255954.79953
[2025-07-29 19:42:00] 2025-07-29 19:41:19,515 | INFO     | intersect: -129970255954.79953
[2025-07-29 19:42:00] 2025-07-29 19:41:19,515 | INFO     | chi2: 5.721788928232829
[2025-07-29 19:42:00] 2025-07-29 19:41:19,515 | INFO     | current chi2=5.721788928232829 (change=51.45507412211696 %)
[2025-07-29 19:42:00] 2025-07-29 19:41:19,515 | INFO     | sum of square deviations: 832775315.7553964
[2025-07-29 19:42:00] 2025-07-29 19:41:19,516 | INFO     | sum of deviations: 22040140923.071938
[2025-07-29 19:42:00] 2025-07-29 19:41:19,516 | INFO     | mean x: 1753813656.1942446
[2025-07-29 19:42:00] 2025-07-29 19:41:19,516 | INFO     | mean y: 2608491.5899280575
[2025-07-29 19:42:00] 2025-07-29 19:41:19,516 | INFO     | -- intersect: -46413632965.166664
[2025-07-29 19:42:00] 2025-07-29 19:41:19,516 | INFO     | intersect: -46413632965.166664
[2025-07-29 19:42:00] 2025-07-29 19:41:19,517 | INFO     | chi2: 1.883386175702178
[2025-07-29 19:42:00] 2025-07-29 19:41:19,517 | INFO     | current chi2=1.883386175702178 (change=67.08396273743952 %)
[2025-07-29 19:42:00] 2025-07-29 19:41:19,517 | INFO     | sum of square deviations: 746095688.0596994
[2025-07-29 19:42:00] 2025-07-29 19:41:19,518 | INFO     | sum of deviations: -551788131.6716423
[2025-07-29 19:42:00] 2025-07-29 19:41:19,518 | INFO     | mean x: 1753813808.7014925
[2025-07-29 19:42:00] 2025-07-29 19:41:19,518 | INFO     | mean y: 2647974.8582089553
[2025-07-29 19:42:00] 2025-07-29 19:41:19,518 | INFO     | -- intersect: 1299711689.7283714
[2025-07-29 19:42:00] 2025-07-29 19:41:19,518 | INFO     | intersect: 1299711689.7283714
[2025-07-29 19:42:00] 2025-07-29 19:41:19,518 | INFO     | chi2: 0.9648883178492144
[2025-07-29 19:42:00] 2025-07-29 19:41:19,518 | INFO     | current chi2=0.9648883178492144 (change=48.76842942263407 %)
[2025-07-29 19:42:00] 2025-07-29 19:41:19,523 | INFO     | sum of square deviations: 665656786.7596893
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | sum of deviations: -7262815087.480619
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | mean x: 1753813961.2015505
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | mean y: 2660558.403100775
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | -- intersect: 19138087029.53321
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | intersect: 19138087029.53321
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | chi2: 0.8631403771893836
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | current chi2=0.8631403771893836 (change=10.545048455621489 %)
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | left removable region: 40
[2025-07-29 19:42:00] 2025-07-29 19:41:19,524 | INFO     | sum of square deviations: 338799995.3009708
[2025-07-29 19:42:00] 2025-07-29 19:41:19,525 | INFO     | sum of deviations: 374053177.00970864
[2025-07-29 19:42:00] 2025-07-29 19:41:19,525 | INFO     | mean x: 1753814388.2135923
[2025-07-29 19:42:00] 2025-07-29 19:41:19,525 | INFO     | mean y: 2683804.13592233
[2025-07-29 19:42:00] 2025-07-29 19:41:19,525 | INFO     | -- intersect: -1933620366.1574144
[2025-07-29 19:42:00] 2025-07-29 19:41:19,525 | INFO     | intersect: -1933620366.1574144
[2025-07-29 19:42:00] 2025-07-29 19:41:19,525 | INFO     | chi2: 7.307309690474424e-05
[2025-07-29 19:42:00] 2025-07-29 19:41:19,526 | INFO     | -- intersect: -1933620366.1574144
[2025-07-29 19:42:00] 2025-07-29 19:41:19,526 | INFO     | current memory leak: 1.10 B/s (using 103 data points, chi2=0.00)
[2025-07-29 19:42:00] 2025-07-29 19:41:19,526 | INFO     | could have reported an average CPU frequency of 2400 MHz (9 samples)
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | ..............................
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | . Timing measurements:
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | . get job = 0 s
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | . initial setup = 9 s
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | . payload setup = 250 s
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | . stage-in = 0 s
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | . payload execution = 9269 s
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | . stage-out = 5 s
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | . log creation = 2 s
[2025-07-29 19:42:00] 2025-07-29 19:41:19,531 | INFO     | ..............................
[2025-07-29 19:42:00] 2025-07-29 19:41:20,187 | INFO     | 
[2025-07-29 19:42:00] 2025-07-29 19:41:20,187 | INFO     | job summary report
[2025-07-29 19:42:00] 2025-07-29 19:41:20,187 | INFO     | --------------------------------------------------
[2025-07-29 19:42:00] 2025-07-29 19:41:20,187 | INFO     | PanDA job id: 6745227332
[2025-07-29 19:42:00] 2025-07-29 19:41:20,187 | INFO     | task id: 45743349
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | errors: (none)
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | pilot state: finished 
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | transexitcode: 0
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | exeerrorcode: 0
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | exeerrordiag: 
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | exitcode: 0
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | exitmsg: OK
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | cpuconsumptiontime: 56200 s
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | nevents: 400
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | neventsw: 0
[2025-07-29 19:42:00] 2025-07-29 19:41:20,188 | INFO     | pid: 1817762
[2025-07-29 19:42:00] 2025-07-29 19:41:20,189 | INFO     | pgrp: 1817762
[2025-07-29 19:42:00] 2025-07-29 19:41:20,189 | INFO     | corecount: 12
[2025-07-29 19:42:00] 2025-07-29 19:41:20,189 | INFO     | event service: False
[2025-07-29 19:42:00] 2025-07-29 19:41:20,189 | INFO     | sizes: {0: 2391081, 1: 2391789, 2: 2391988, 3: 2392016, 14: 2392016, 25: 2392044, 36: 2392200, 46: 2392228, 57: 2392256, 68: 2392284, 79: 2392312, 90: 2392648, 100
[2025-07-29 19:42:00] 2025-07-29 19:41:20,189 | INFO     | --------------------------------------------------
[2025-07-29 19:42:00] 2025-07-29 19:41:20,189 | INFO     | 
[2025-07-29 19:42:00] 2025-07-29 19:41:20,189 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31421/slots/1
[2025-07-29 19:42:00] 2025-07-29 19:41:20,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,826 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 19:42:00] 2025-07-29 19:41:20,827 | INFO     | job 6745227332 has completed (purged errors)
[2025-07-29 19:42:00] 2025-07-29 19:41:20,827 | INFO     | overall cleanup function is called
[2025-07-29 19:42:00] 2025-07-29 19:41:21,843 | INFO     | --- collectZombieJob: --- 10, [1817762]
[2025-07-29 19:42:00] 2025-07-29 19:41:21,843 | INFO     | zombie collector waiting for pid 1817762
[2025-07-29 19:42:00] 2025-07-29 19:41:21,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 19:42:00] 2025-07-29 19:41:21,843 | INFO     | collected zombie processes
[2025-07-29 19:42:00] 2025-07-29 19:41:21,843 | INFO     | will attempt to kill all subprocesses of pid=1817762
[2025-07-29 19:42:00] 2025-07-29 19:41:23,092 | INFO     | process IDs to be killed: [1817762] (in reverse order)
[2025-07-29 19:42:00] 2025-07-29 19:41:33,152 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 19:42:00] 2025-07-29 19:41:33,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 19:42:00] 2025-07-29 19:41:33,197 | INFO     | did not find any defunct processes belonging to 1817762
[2025-07-29 19:42:00] 2025-07-29 19:41:33,247 | INFO     | did not find any defunct processes belonging to 1817762
[2025-07-29 19:42:00] 2025-07-29 19:41:33,247 | INFO     | ready for new job
[2025-07-29 19:42:00] 2025-07-29 19:41:33,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 19:42:00] 2025-07-29 19:41:33,250 | INFO     | ***************************************
[2025-07-29 19:42:00] 2025-07-29 19:41:33,250 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 19:42:00] 2025-07-29 19:41:33,250 | INFO     | ***************************************
[2025-07-29 19:42:00] 2025-07-29 19:41:33,250 | INFO     | 
[2025-07-29 19:42:00] 2025-07-29 19:41:33,274 | INFO     | architecture information:
[2025-07-29 19:42:00] 2025-07-29 19:41:33,291 | INFO     | executing command: cat /etc/os-release
[2025-07-29 19:42:00] 2025-07-29 19:41:33,791 | INFO     | cat /etc/os-release:
[2025-07-29 19:42:00] NAME="CentOS Linux"
[2025-07-29 19:42:00] VERSION="7 (Core)"
[2025-07-29 19:42:00] ID="centos"
[2025-07-29 19:42:00] ID_LIKE="rhel fedora"
[2025-07-29 19:42:00] VERSION_ID="7"
[2025-07-29 19:42:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 19:42:00] ANSI_COLOR="0;31"
[2025-07-29 19:42:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 19:42:00] HOME_URL="https://www.centos.org/"
[2025-07-29 19:42:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 19:42:00] 
[2025-07-29 19:42:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 19:42:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 19:42:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 19:42:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 19:42:00] 
[2025-07-29 19:42:00] 2025-07-29 19:41:33,792 | INFO     | ***************************************
[2025-07-29 19:42:00] 2025-07-29 19:41:34,295 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31421/slots/1
[2025-07-29 19:42:00] 2025-07-29 19:41:34,795 | INFO     | sufficient remaining disk space (288491569152 B)
[2025-07-29 19:42:00] 2025-07-29 19:41:34,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 19:42:00] 2025-07-29 19:41:34,796 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 19:42:00] 2025-07-29 19:41:34,796 | INFO     | update_server=False
[2025-07-29 19:42:00] 2025-07-29 19:41:34,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 19:42:00] 2025-07-29 19:41:34,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 19:42:00] 2025-07-29 19:41:35,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 19:42:00] 2025-07-29 19:41:35,063 | INFO     | aborting loop
[2025-07-29 19:42:00] 2025-07-29 19:41:35,499 | INFO     | all data control threads have been joined
[2025-07-29 19:42:00] 2025-07-29 19:41:35,511 | INFO     | all payload control threads have been joined
[2025-07-29 19:42:00] 2025-07-29 19:41:35,799 | INFO     | [job] retrieve thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:35,931 | INFO     | all job control threads have been joined
[2025-07-29 19:42:00] 2025-07-29 19:41:35,983 | INFO     | [payload] failed_post thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:36,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:36,067 | INFO     | [job] job monitor thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:36,503 | INFO     | [data] control thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:36,515 | INFO     | [payload] control thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:36,715 | INFO     | [payload] validate_post thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:36,807 | INFO     | [data] copytool_out thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:36,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 19:42:00] 2025-07-29 19:41:36,935 | INFO     | [job] control thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:37,211 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:37,255 | INFO     | [data] copytool_in thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:37,259 | INFO     | [job] validate thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:37,275 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:37,291 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:37,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 19:42:00] 2025-07-29 19:41:37,819 | INFO     | [job] queue monitor thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:41,515 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 19:42:00] 2025-07-29 19:41:42,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692261222208)>', '<ExcThread(monitor, started 139691949004544)>']
[2025-07-29 19:42:00] 2025-07-29 19:41:47,255 | INFO     | all workflow threads have been joined
[2025-07-29 19:42:00] 2025-07-29 19:41:47,255 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 19:42:00] 2025-07-29 19:41:47,255 | INFO     | traces error code: 0
[2025-07-29 19:42:00] 2025-07-29 19:41:47,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 19:42:00] 2025-07-29 19:41:55,065 | INFO     | PID=1771000 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 19:42:00] 2025-07-29 19:41:55,065 | INFO     | .. there are 20 such processes running
[2025-07-29 19:42:00] 2025-07-29 19:41:55,066 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 19:42:00] 2025-07-29 19:41:55,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 19:42:00] 2025-07-29 19:41:55,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 19:42:00] 2025-07-29 19:41:55,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 19:42:00] 2025-07-29 19:41:55,071 | INFO     | [monitor] control thread has ended
[2025-07-29 19:42:00] 2025-07-29 19:41:55,607 [wrapper] ==== pilot stdout END ====
[2025-07-29 19:42:00] 2025-07-29 19:41:55,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 19:42:00] 2025-07-29 19:41:55,795 [wrapper] pilotpid: 1771000
[2025-07-29 19:42:00] 2025-07-29 19:41:55,943 [wrapper] Pilot exit status: 0
[2025-07-29 19:42:00] 2025-07-29 19:41:56,460 [wrapper] pandaids: 6745227332
[2025-07-29 19:42:00] 2025-07-29 19:41:57,663 [wrapper] cleanup supervisor_pilot 2408286 1771001
[2025-07-29 19:42:00] 2025-07-29 19:41:57,787 [wrapper] Test setup, not cleaning
[2025-07-29 19:42:00] 2025-07-29 19:41:57,867 [wrapper] apfmon messages muted
[2025-07-29 19:42:00] 2025-07-29 19:41:57,942 [wrapper] ==== wrapper stdout END ====
[2025-07-29 19:42:00] 2025-07-29 19:41:58,027 [wrapper] ==== wrapper stderr END ====
[2025-07-29 19:42:00]  *** Error codes and diagnostics ***
[2025-07-29 19:42:00]     "exeErrorCode": 0,
[2025-07-29 19:42:00]     "exeErrorDiag": "",
[2025-07-29 19:42:00]     "pilotErrorCode": 0,
[2025-07-29 19:42:00]     "pilotErrorDiag": "",
[2025-07-29 19:42:00]  *** Listing of results directory ***
[2025-07-29 19:42:00] total 439756
[2025-07-29 19:42:00] -rw-r--r-- 1 boinc boinc    530466 Jul 26 12:44 pilot3.tar.gz
[2025-07-29 19:42:00] -rw-r--r-- 1 boinc boinc      5112 Jul 26 13:05 queuedata.json
[2025-07-29 19:42:00] -rwx------ 1 boinc boinc     36292 Jul 26 13:06 runpilot2-wrapper.sh
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc       100 Jul 29 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 19:42:00] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 16:49 run_atlas
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc       105 Jul 29 16:49 job.xml
[2025-07-29 19:42:00] -rw-r--r-- 2 boinc boinc 229852328 Jul 29 16:49 EVNT.45743347._002196.pool.root.1
[2025-07-29 19:42:00] -rw-r--r-- 2 boinc boinc     15095 Jul 29 16:49 start_atlas.sh
[2025-07-29 19:42:00] drwxrwx--x 2 boinc boinc      4096 Jul 29 16:49 shared
[2025-07-29 19:42:00] -rw-r--r-- 2 boinc boinc    542900 Jul 29 16:49 input.tar.gz
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc      6569 Jul 29 16:49 init_data.xml
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc         0 Jul 29 16:49 boinc_setup_complete
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc         0 Jul 29 16:49 boinc_lockfile
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc      2563 Jul 29 16:50 pandaJob.out
[2025-07-29 19:42:00] -rw------- 1 boinc boinc    977324 Jul 29 16:54 agis_schedconf.cvmfs.json
[2025-07-29 19:42:00] -rw------- 1 boinc boinc   1589827 Jul 29 16:54 agis_ddmendpoints.agis.ALL.json
[2025-07-29 19:42:00] drwx------ 4 boinc boinc      4096 Jul 29 16:55 pilot3
[2025-07-29 19:42:00] -rw------- 1 boinc boinc 214123746 Jul 29 19:36 HITS.45743349._038335.pool.root.1
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc       531 Jul 29 19:37 boinc_task_state.xml
[2025-07-29 19:42:00] -rw------- 1 boinc boinc      1021 Jul 29 19:38 memory_monitor_summary.json
[2025-07-29 19:42:00] -rw------- 1 boinc boinc    399461 Jul 29 19:38 log.45743349._038335.job.log.tgz.1
[2025-07-29 19:42:00] -rw------- 1 boinc boinc      7736 Jul 29 19:41 heartbeat.json
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc      8192 Jul 29 19:41 boinc_mmap_file
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc        28 Jul 29 19:41 wrapper_checkpoint.txt
[2025-07-29 19:42:00] -rw------- 1 boinc boinc        95 Jul 29 19:41 pilot_heartbeat.json
[2025-07-29 19:42:00] -rw------- 1 boinc boinc       823 Jul 29 19:41 pilotlog.txt
[2025-07-29 19:42:00] -rw------- 1 boinc boinc    830753 Jul 29 19:41 log.45743349._038335.job.log.1
[2025-07-29 19:42:00] -rw------- 1 boinc boinc       357 Jul 29 19:41 output.list
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc       620 Jul 29 19:41 runtime_log
[2025-07-29 19:42:00] -rw------- 1 boinc boinc   1249280 Jul 29 19:41 result.tar.gz
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc      8965 Jul 29 19:42 runtime_log.err
[2025-07-29 19:42:00] -rw------- 1 boinc boinc       655 Jul 29 19:42 1LIODmkmtz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqBSLDma7PFXo.diag
[2025-07-29 19:42:00] -rw-rw-r-- 1 boinc boinc     20786 Jul 29 19:42 stderr.txt
[2025-07-29 19:42:00] HITS file was successfully produced:
[2025-07-29 19:42:00] -rw------- 1 boinc boinc 214123746 Jul 29 19:36 shared/HITS.pool.root.1
[2025-07-29 19:42:00]  *** Contents of shared directory: ***
[2025-07-29 19:42:00] total 435352
[2025-07-29 19:42:00] -rw-r--r-- 2 boinc boinc 229852328 Jul 29 16:49 ATLAS.root_0
[2025-07-29 19:42:00] -rw-r--r-- 2 boinc boinc     15095 Jul 29 16:49 start_atlas.sh
[2025-07-29 19:42:00] -rw-r--r-- 2 boinc boinc    542900 Jul 29 16:49 input.tar.gz
[2025-07-29 19:42:00] -rw------- 1 boinc boinc 214123746 Jul 29 19:36 HITS.pool.root.1
[2025-07-29 19:42:00] -rw------- 1 boinc boinc   1249280 Jul 29 19:41 result.tar.gz
19:42:01 (1744899): run_atlas exited; CPU time 56698.812142
19:42:01 (1744899): called boinc_finish(0)

</stderr_txt>
]]>

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