Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
22:01:08 (3020960): wrapper (7.7.26015): starting
22:01:08 (3020960): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 22:01:08] Arguments: --nthreads 12
[2025-07-27 22:01:08] Threads: 12
[2025-07-27 22:01:08] Checking for CVMFS
[2025-07-27 22:01:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:01:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:01:13] 2.13.1.0 3021183 0 23772 148832 3 1 3747519 6144001 0 130560 0 0 0.000 1291 970 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-27 22:01:13] CVMFS is ok
[2025-07-27 22:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:01:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-27 22:01:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-27 22:01:13] Further information can be found at the LHC@home message board.
[2025-07-27 22:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:01:13] Checking for apptainer binary...
[2025-07-27 22:01:13] apptainer is not installed, using version from CVMFS
[2025-07-27 22:01:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:01:13] ace
[2025-07-27 22:01:13] apptainer works
[2025-07-27 22:01:13] Set ATHENA_PROC_NUMBER=12
[2025-07-27 22:01:13] Set ATHENA_CORE_NUMBER=12
[2025-07-27 22:01:13] Starting ATLAS job with PandaID=6745227111
[2025-07-27 22:01:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:22:40]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:22:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:22:40]  replicas=None
[2025-07-27 23:22:40]  scope=mc23_13p6TeV
[2025-07-27 23:22:40]  status=None
[2025-07-27 23:22:40]  status_code=0
[2025-07-27 23:22:40]  storage_token=
[2025-07-27 23:22:40]  surl=/var/lib/boinc-client/slots/8/PanDA_Pilot-6745227111/log.45743349._038114.job.log.tgz.1
[2025-07-27 23:22:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/d6/log.45743349._038114.job.log.tgz.1
[2025-07-27 23:22:40]  workdir=None
[2025-07-27 23:22:40] ]
[2025-07-27 23:22:40] 2025-07-28 04:21:57,537 | INFO     | transferring file log.45743349._038114.job.log.tgz.1 from /var/lib/boinc-client/slots/8/PanDA_Pilot-6745227111/log.45743349._038114.job.log.tgz.1 to /var/lib/boinc
[2025-07-27 23:22:40] 2025-07-28 04:21:57,538 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/8/PanDA_Pilot-6745227111/log.45743349._038114.job.log.tgz.1 /var/lib/boinc-client/slots/8/log.457433
[2025-07-27 23:22:40] 2025-07-28 04:21:57,554 | INFO     | adding to output.list: log.45743349._038114.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/d6/log.45743349._038114.job.log.tg
[2025-07-27 23:22:40] 2025-07-28 04:21:57,555 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:22:40] 2025-07-28 04:21:57,555 | INFO     | summary of transferred files:
[2025-07-27 23:22:40] 2025-07-28 04:21:57,555 | INFO     |  -- lfn=log.45743349._038114.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:22:40] 2025-07-28 04:21:57,555 | INFO     | stage-out finished correctly
[2025-07-27 23:22:40] 2025-07-28 04:21:59,122 | INFO     | monitor loop #363: job 0:6745227111 is in state 'finished'
[2025-07-27 23:22:40] 2025-07-28 04:21:59,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:22:40] 2025-07-28 04:21:59,452 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:22:40] 2025-07-28 04:21:59,502 | INFO     | job 6745227111 has state=finished
[2025-07-27 23:22:40] 2025-07-28 04:21:59,502 | INFO     | preparing for final server update for job 6745227111 in state='finished'
[2025-07-27 23:22:40] 2025-07-28 04:21:59,503 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:22:40] 2025-07-28 04:21:59,503 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:22:40] 2025-07-28 04:21:59,503 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:22:40] 2025-07-28 04:21:59,503 | INFO     | job 6745227111 has finished - writing final server update
[2025-07-27 23:22:40] 2025-07-28 04:21:59,503 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:22:40] 2025-07-28 04:21:59,504 | INFO     | executing command: lscpu
[2025-07-27 23:22:40] 2025-07-28 04:21:59,523 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:22:40] 2025-07-28 04:22:01,625 | INFO     | monitor loop #364: job 0:6745227111 is in state 'finished'
[2025-07-27 23:22:40] 2025-07-28 04:22:01,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:22:40] 2025-07-28 04:22:03,804 | INFO     | PID=3025271 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:22:40] 2025-07-28 04:22:04,126 | INFO     | monitor loop #365: job 0:6745227111 is in state 'finished'
[2025-07-27 23:22:40] 2025-07-28 04:22:04,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:22:40] 2025-07-28 04:22:06,630 | INFO     | monitor loop #366: job 0:6745227111 is in state 'finished'
[2025-07-27 23:22:40] 2025-07-28 04:22:06,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:22:40] 2025-07-28 04:22:07,169 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:22:40] 2025-07-28 04:22:07,171 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2626.320687499999
[2025-07-27 23:22:40] 2025-07-28 04:22:07,174 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-6745227111/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:22:40] 2025-07-28 04:22:07,174 | INFO     | extracted standard info from prmon json
[2025-07-27 23:22:40] 2025-07-28 04:22:07,174 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:22:40] 2025-07-28 04:22:07,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:22:40] 2025-07-28 04:22:07,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:22:40] 2025-07-28 04:22:07,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:22:40] 2025-07-28 04:22:07,176 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:22:40] 2025-07-28 04:22:07,176 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 23:22:40] 2025-07-28 04:22:07,176 | INFO     | sum of deviations: -3562765969.5
[2025-07-27 23:22:40] 2025-07-28 04:22:07,176 | INFO     | mean x: 1753674200.5
[2025-07-27 23:22:40] 2025-07-28 04:22:07,176 | INFO     | mean y: 2759475.7083333335
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | -- intersect: 53996582534.0495
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | intersect: 53996582534.0495
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | chi2: 0.08206462168599585
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | -- intersect: 53996582534.0495
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | current memory leak: -30.79 B/s (using 72 data points, chi2=0.08)
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | could have reported an average CPU frequency of 2389 MHz (6 samples)
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | ..............................
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | . Timing measurements:
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | . get job = 0 s
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | . initial setup = 3 s
[2025-07-27 23:22:40] 2025-07-28 04:22:07,177 | INFO     | . payload setup = 10 s
[2025-07-27 23:22:40] 2025-07-28 04:22:07,178 | INFO     | . stage-in = 0 s
[2025-07-27 23:22:40] 2025-07-28 04:22:07,178 | INFO     | . payload execution = 4789 s
[2025-07-27 23:22:40] 2025-07-28 04:22:07,178 | INFO     | . stage-out = 0 s
[2025-07-27 23:22:40] 2025-07-28 04:22:07,178 | INFO     | . log creation = 0 s
[2025-07-27 23:22:40] 2025-07-28 04:22:07,178 | INFO     | ..............................
[2025-07-27 23:22:40] 2025-07-28 04:22:07,298 | INFO     | 
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | job summary report
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | --------------------------------------------------
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | PanDA job id: 6745227111
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | task id: 45743349
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | errors: (none)
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | pilot state: finished 
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | transexitcode: 0
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | exeerrorcode: 0
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | exeerrordiag: 
[2025-07-27 23:22:40] 2025-07-28 04:22:07,299 | INFO     | exitcode: 0
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | exitmsg: OK
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | cpuconsumptiontime: 53755 s
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | nevents: 400
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | neventsw: 0
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | pid: 3031862
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | pgrp: 3031862
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | corecount: 12
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | event service: False
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | sizes: {0: 2397304, 1: 2397503, 7: 2397765, 11: 2397793, 4803: 2424053, 4804: 2433065, 4806: 2433249, 4814: 2433443}
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | --------------------------------------------------
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | 
[2025-07-27 23:22:40] 2025-07-28 04:22:07,300 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8
[2025-07-27 23:22:40] 2025-07-28 04:22:07,322 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,322 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,322 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,322 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,322 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,322 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,322 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | job 6745227111 has completed (purged errors)
[2025-07-27 23:22:40] 2025-07-28 04:22:07,323 | INFO     | overall cleanup function is called
[2025-07-27 23:22:40] 2025-07-28 04:22:08,331 | INFO     | --- collectZombieJob: --- 10, [3031862]
[2025-07-27 23:22:40] 2025-07-28 04:22:08,331 | INFO     | zombie collector waiting for pid 3031862
[2025-07-27 23:22:40] 2025-07-28 04:22:08,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:22:40] 2025-07-28 04:22:08,331 | INFO     | collected zombie processes
[2025-07-27 23:22:40] 2025-07-28 04:22:08,332 | INFO     | will attempt to kill all subprocesses of pid=3031862
[2025-07-27 23:22:40] 2025-07-28 04:22:08,413 | INFO     | process IDs to be killed: [3031862] (in reverse order)
[2025-07-27 23:22:40] 2025-07-28 04:22:08,446 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:22:40] 2025-07-28 04:22:08,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:22:40] 2025-07-28 04:22:08,449 | INFO     | did not find any defunct processes belonging to 3031862
[2025-07-27 23:22:40] 2025-07-28 04:22:08,451 | INFO     | did not find any defunct processes belonging to 3031862
[2025-07-27 23:22:40] 2025-07-28 04:22:08,451 | INFO     | ready for new job
[2025-07-27 23:22:40] 2025-07-28 04:22:08,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:22:40] 2025-07-28 04:22:08,452 | INFO     | ***************************************
[2025-07-27 23:22:40] 2025-07-28 04:22:08,453 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:22:40] 2025-07-28 04:22:08,453 | INFO     | ***************************************
[2025-07-27 23:22:40] 2025-07-28 04:22:08,453 | INFO     | 
[2025-07-27 23:22:40] 2025-07-28 04:22:08,453 | INFO     | architecture information:
[2025-07-27 23:22:40] 2025-07-28 04:22:08,453 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:22:40] 2025-07-28 04:22:08,464 | INFO     | cat /etc/os-release:
[2025-07-27 23:22:40] NAME="CentOS Linux"
[2025-07-27 23:22:40] VERSION="7 (Core)"
[2025-07-27 23:22:40] ID="centos"
[2025-07-27 23:22:40] ID_LIKE="rhel fedora"
[2025-07-27 23:22:40] VERSION_ID="7"
[2025-07-27 23:22:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:22:40] ANSI_COLOR="0;31"
[2025-07-27 23:22:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:22:40] HOME_URL="https://www.centos.org/"
[2025-07-27 23:22:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:22:40] 
[2025-07-27 23:22:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:22:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:22:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:22:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:22:40] 
[2025-07-27 23:22:40] 2025-07-28 04:22:08,464 | INFO     | ***************************************
[2025-07-27 23:22:40] 2025-07-28 04:22:08,967 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/8
[2025-07-27 23:22:40] 2025-07-28 04:22:08,980 | INFO     | sufficient remaining disk space (22372417536 B)
[2025-07-27 23:22:40] 2025-07-28 04:22:08,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:22:40] 2025-07-28 04:22:08,980 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:22:40] 2025-07-28 04:22:08,980 | INFO     | update_server=False
[2025-07-27 23:22:40] 2025-07-28 04:22:08,980 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:22:40] 2025-07-28 04:22:08,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:22:40] 2025-07-28 04:22:08,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:22:40] 2025-07-28 04:22:09,041 | INFO     | all job control threads have been joined
[2025-07-27 23:22:40] 2025-07-28 04:22:09,133 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 23:22:40] 2025-07-28 04:22:09,133 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 23:22:40] 2025-07-28 04:22:09,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:22:40] 2025-07-28 04:22:09,133 | INFO     | will abort loop
[2025-07-27 23:22:40] 2025-07-28 04:22:09,439 | INFO     | all payload control threads have been joined
[2025-07-27 23:22:40] 2025-07-28 04:22:09,722 | INFO     | all data control threads have been joined
[2025-07-27 23:22:40] 2025-07-28 04:22:09,982 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:09,982 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:22:40] 2025-07-28 04:22:10,047 | INFO     | [job] control thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,139 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,226 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,444 | INFO     | [payload] control thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,561 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,728 | INFO     | [data] control thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,776 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,801 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,986 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:10,996 | INFO     | [job] validate thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:11,000 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:11,285 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:14,014 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:22:40] 2025-07-28 04:22:14,531 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662881433408)>', '<ExcThread(monitor, started 140662259316480)>']
[2025-07-27 23:22:40] 2025-07-28 04:22:19,557 | INFO     | all workflow threads have been joined
[2025-07-27 23:22:40] 2025-07-28 04:22:19,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:22:40] 2025-07-28 04:22:19,558 | INFO     | traces error code: 0
[2025-07-27 23:22:40] 2025-07-28 04:22:19,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:22:40] 2025-07-28 04:22:39,997 | INFO     | PID=3025271 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:22:40] 2025-07-28 04:22:39,998 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:22:40] 2025-07-28 04:22:39,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:22:40] 2025-07-28 04:22:39,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:22:40] 2025-07-28 04:22:39,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:22:40] 2025-07-28 04:22:39,998 | INFO     | [monitor] control thread has ended
[2025-07-27 23:22:40] 2025-07-28 04:22:40,156 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:22:40] 2025-07-28 04:22:40,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:22:40] 2025-07-28 04:22:40,159 [wrapper] pilotpid: 3025271
[2025-07-27 23:22:40] 2025-07-28 04:22:40,161 [wrapper] Pilot exit status: 0
[2025-07-27 23:22:40] 2025-07-28 04:22:40,168 [wrapper] pandaids: 6745227111
[2025-07-27 23:22:40] 2025-07-28 04:22:40,188 [wrapper] cleanup supervisor_pilot 3046239 3025272
[2025-07-27 23:22:40] 2025-07-28 04:22:40,190 [wrapper] Test setup, not cleaning
[2025-07-27 23:22:40] 2025-07-28 04:22:40,191 [wrapper] apfmon messages muted
[2025-07-27 23:22:40] 2025-07-28 04:22:40,193 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:22:40] 2025-07-28 04:22:40,195 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:22:40]  *** Error codes and diagnostics ***
[2025-07-27 23:22:40]     "exeErrorCode": 0,
[2025-07-27 23:22:40]     "exeErrorDiag": "",
[2025-07-27 23:22:40]     "pilotErrorCode": 0,
[2025-07-27 23:22:40]     "pilotErrorDiag": "",
[2025-07-27 23:22:40]  *** Listing of results directory ***
[2025-07-27 23:22:40] total 353304
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc    530466 Jul 26 07:44 pilot3.tar.gz
[2025-07-27 23:22:40] -rwx------ 1 boinc boinc     36292 Jul 26 07:45 runpilot2-wrapper.sh
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc      5112 Jul 26 07:45 queuedata.json
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc       100 Jul 27 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:22:40] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 22:01 run_atlas
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc       105 Jul 27 22:01 job.xml
[2025-07-27 23:22:40] -rw-r--r-- 2 boinc boinc 148814722 Jul 27 22:01 EVNT.45743347._002182.pool.root.1
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc      6788 Jul 27 22:01 init_data.xml
[2025-07-27 23:22:40] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:01 start_atlas.sh
[2025-07-27 23:22:40] drwxrwx--x 2 boinc boinc      4096 Jul 27 22:01 shared
[2025-07-27 23:22:40] -rw-r--r-- 2 boinc boinc    542883 Jul 27 22:01 input.tar.gz
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc         0 Jul 27 22:01 boinc_lockfile
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc      2559 Jul 27 22:01 pandaJob.out
[2025-07-27 23:22:40] -rw------- 1 boinc boinc    980125 Jul 27 22:01 agis_schedconf.cvmfs.json
[2025-07-27 23:22:40] -rw------- 1 boinc boinc   1593052 Jul 27 22:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:22:40] drwx------ 4 boinc boinc      4096 Jul 27 22:01 pilot3
[2025-07-27 23:22:40] -rw------- 1 boinc boinc 207453967 Jul 27 23:21 HITS.45743349._038114.pool.root.1
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc       529 Jul 27 23:21 boinc_task_state.xml
[2025-07-27 23:22:40] -rw------- 1 boinc boinc      1030 Jul 27 23:21 memory_monitor_summary.json
[2025-07-27 23:22:40] -rw------- 1 boinc boinc    351052 Jul 27 23:21 log.45743349._038114.job.log.tgz.1
[2025-07-27 23:22:40] -rw------- 1 boinc boinc      7770 Jul 27 23:22 heartbeat.json
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc      8192 Jul 27 23:22 boinc_mmap_file
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc        27 Jul 27 23:22 wrapper_checkpoint.txt
[2025-07-27 23:22:40] -rw------- 1 boinc boinc       747 Jul 27 23:22 pilotlog.txt
[2025-07-27 23:22:40] -rw------- 1 boinc boinc        95 Jul 27 23:22 pilot_heartbeat.json
[2025-07-27 23:22:40] -rw------- 1 boinc boinc    469586 Jul 27 23:22 log.45743349._038114.job.log.1
[2025-07-27 23:22:40] -rw------- 1 boinc boinc       357 Jul 27 23:22 output.list
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc       620 Jul 27 23:22 runtime_log
[2025-07-27 23:22:40] -rw------- 1 boinc boinc    839680 Jul 27 23:22 result.tar.gz
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc      8697 Jul 27 23:22 runtime_log.err
[2025-07-27 23:22:40] -rw------- 1 boinc boinc       642 Jul 27 23:22 GLWKDmYStz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT9RLDmpTvLDm.diag
[2025-07-27 23:22:40] -rw-r--r-- 1 boinc boinc     22135 Jul 27 23:22 stderr.txt
[2025-07-27 23:22:40] HITS file was successfully produced:
[2025-07-27 23:22:40] -rw------- 1 boinc boinc 207453967 Jul 27 23:21 shared/HITS.pool.root.1
[2025-07-27 23:22:40]  *** Contents of shared directory: ***
[2025-07-27 23:22:40] total 349296
[2025-07-27 23:22:40] -rw-r--r-- 2 boinc boinc 148814722 Jul 27 22:01 ATLAS.root_0
[2025-07-27 23:22:40] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:01 start_atlas.sh
[2025-07-27 23:22:40] -rw-r--r-- 2 boinc boinc    542883 Jul 27 22:01 input.tar.gz
[2025-07-27 23:22:40] -rw------- 1 boinc boinc 207453967 Jul 27 23:21 HITS.pool.root.1
[2025-07-27 23:22:40] -rw------- 1 boinc boinc    839680 Jul 27 23:22 result.tar.gz
23:22:42 (3020960): run_atlas exited; CPU time 53818.075797
23:22:42 (3020960): called boinc_finish(0)

</stderr_txt>
]]>

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