Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:35:00 (3463116): wrapper (7.7.26015): starting
14:35:00 (3463116): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 14:35:00] Arguments: --nthreads 8
[2025-07-26 14:35:00] Threads: 8
[2025-07-26 14:35:00] Checking for CVMFS
[2025-07-26 14:35:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 14:35:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 14:35:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 14:35:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 14:35:00] 2.12.6.0 4167112 17307 339312 148786 2 154 20457803 32935936 19268 16776704 1 95530425 99.674 162138419 16556 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 14:35:00] CVMFS is ok
[2025-07-26 14:35:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 14:35:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 14:35:00] Further information can be found at the LHC@home message board.
[2025-07-26 14:35:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 14:35:00] Checking for apptainer binary...
[2025-07-26 14:35:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 14:35:00] Running /usr/bin/apptainer --version
[2025-07-26 14:35:00] apptainer version 1.4.1-1.el9
[2025-07-26 14:35:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 14:35:01] c7-16-8.aglt2.org
[2025-07-26 14:35:01] apptainer works
[2025-07-26 14:35:01] Set ATHENA_PROC_NUMBER=8
[2025-07-26 14:35:01] Set ATHENA_CORE_NUMBER=8
[2025-07-26 14:35:01] Starting ATLAS job with PandaID=6745227309
[2025-07-26 14:35:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:04:44]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:04:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-26 16:04:44]  is_altstaged=None
[2025-07-26 16:04:44]  is_tar=False
[2025-07-26 16:04:44]  lfn=log.45743349._038312.job.log.tgz.1
[2025-07-26 16:04:44]  mtime=0
[2025-07-26 16:04:44]  protocol_id=None
[2025-07-26 16:04:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 16:04:44]  replicas=None
[2025-07-26 16:04:44]  scope=mc23_13p6TeV
[2025-07-26 16:04:44]  status=None
[2025-07-26 16:04:44]  status_code=0
[2025-07-26 16:04:44]  storage_token=
[2025-07-26 16:04:44]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745227309/log.45743349._038312.job.log.tgz.1
[2025-07-26 16:04:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/7b/log.45743349._038312.job.log.tgz.1
[2025-07-26 16:04:44]  workdir=None
[2025-07-26 16:04:44] ]
[2025-07-26 16:04:44] 2025-07-26 20:04:03,784 | INFO     | transferring file log.45743349._038312.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745227309/log.45743349._038312.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 16:04:44] 2025-07-26 20:04:03,785 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745227309/log.45743349._038312.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._038312.job
[2025-07-26 16:04:44] 2025-07-26 20:04:03,812 | INFO     | adding to output.list: log.45743349._038312.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/7b/log.45743349._038312.job.log.tg
[2025-07-26 16:04:44] 2025-07-26 20:04:03,813 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 16:04:44] 2025-07-26 20:04:03,813 | INFO     | summary of transferred files:
[2025-07-26 16:04:44] 2025-07-26 20:04:03,813 | INFO     |  -- lfn=log.45743349._038312.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 16:04:44] 2025-07-26 20:04:03,814 | INFO     | stage-out finished correctly
[2025-07-26 16:04:44] 2025-07-26 20:04:03,879 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 16:04:44] 2025-07-26 20:04:04,666 | INFO     | job 6745227309 has state=finished
[2025-07-26 16:04:44] 2025-07-26 20:04:04,666 | INFO     | preparing for final server update for job 6745227309 in state='finished'
[2025-07-26 16:04:44] 2025-07-26 20:04:04,667 | INFO     | this job has now completed (state=finished)
[2025-07-26 16:04:44] 2025-07-26 20:04:04,667 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 16:04:44] 2025-07-26 20:04:04,667 | INFO     | log transfer has been attempted: DONE
[2025-07-26 16:04:44] 2025-07-26 20:04:04,667 | INFO     | job 6745227309 has finished - writing final server update
[2025-07-26 16:04:44] 2025-07-26 20:04:04,667 | INFO     | total number of processed events: 400 (read)
[2025-07-26 16:04:44] 2025-07-26 20:04:04,669 | INFO     | executing command: lscpu
[2025-07-26 16:04:44] 2025-07-26 20:04:04,750 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 16:04:44] 2025-07-26 20:04:08,906 | WARNING  | process 3475822 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 16:04:44] 2025-07-26 20:04:08,906 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745227309/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:04:44] 2025-07-26 20:04:09,387 | INFO     | number of running child processes to parent process 3475822: 1
[2025-07-26 16:04:44] 2025-07-26 20:04:09,387 | INFO     | maximum number of monitored processes: 6
[2025-07-26 16:04:44] 2025-07-26 20:04:10,564 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 16:04:44] 2025-07-26 20:04:10,569 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3050.5960520833337
[2025-07-26 16:04:44] 2025-07-26 20:04:10,582 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745227309/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:04:44] 2025-07-26 20:04:10,583 | INFO     | extracted standard info from prmon json
[2025-07-26 16:04:44] 2025-07-26 20:04:10,583 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 16:04:44] 2025-07-26 20:04:10,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 16:04:44] 2025-07-26 20:04:10,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:04:44] 2025-07-26 20:04:10,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:04:44] 2025-07-26 20:04:10,585 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:04:44] 2025-07-26 20:04:10,585 | INFO     | sum of square deviations: 158737860.0
[2025-07-26 16:04:44] 2025-07-26 20:04:10,586 | INFO     | sum of deviations: -11987536939.0
[2025-07-26 16:04:44] 2025-07-26 20:04:10,586 | INFO     | mean x: 1753557664.5
[2025-07-26 16:04:44] 2025-07-26 20:04:10,586 | INFO     | mean y: 2249389.2
[2025-07-26 16:04:44] 2025-07-26 20:04:10,586 | INFO     | -- intersect: 132427099250.85442
[2025-07-26 16:04:44] 2025-07-26 20:04:10,586 | INFO     | intersect: 132427099250.85442
[2025-07-26 16:04:44] 2025-07-26 20:04:10,586 | INFO     | chi2: 0.09760727494894289
[2025-07-26 16:04:44] 2025-07-26 20:04:10,586 | INFO     | -- intersect: 132427099250.85442
[2025-07-26 16:04:44] 2025-07-26 20:04:10,586 | INFO     | current memory leak: -75.52 B/s (using 80 data points, chi2=0.10)
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | could have reported an average CPU frequency of 3041 MHz (6 samples)
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | ..............................
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | . Timing measurements:
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | . get job = 0 s
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | . initial setup = 2 s
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | . payload setup = 9 s
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | . stage-in = 0 s
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | . payload execution = 5296 s
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | . stage-out = 0 s
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | . log creation = 0 s
[2025-07-26 16:04:44] 2025-07-26 20:04:10,587 | INFO     | ..............................
[2025-07-26 16:04:44] 2025-07-26 20:04:10,749 | INFO     | 
[2025-07-26 16:04:44] 2025-07-26 20:04:10,749 | INFO     | job summary report
[2025-07-26 16:04:44] 2025-07-26 20:04:10,749 | INFO     | --------------------------------------------------
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | PanDA job id: 6745227309
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | task id: 45743349
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | errors: (none)
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | pilot state: finished 
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | transexitcode: 0
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | exeerrorcode: 0
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | exeerrordiag: 
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | exitcode: 0
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | exitmsg: OK
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | cpuconsumptiontime: 38069 s
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | nevents: 400
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | neventsw: 0
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | pid: 3475822
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | pgrp: 3475822
[2025-07-26 16:04:44] 2025-07-26 20:04:10,750 | INFO     | corecount: 8
[2025-07-26 16:04:44] 2025-07-26 20:04:10,751 | INFO     | event service: False
[2025-07-26 16:04:44] 2025-07-26 20:04:10,751 | INFO     | sizes: {0: 2397424, 1: 2397424, 6: 2397714, 11: 2397742, 5309: 2424146, 5310: 2433328, 5317: 2433466}
[2025-07-26 16:04:44] 2025-07-26 20:04:10,751 | INFO     | --------------------------------------------------
[2025-07-26 16:04:44] 2025-07-26 20:04:10,751 | INFO     | 
[2025-07-26 16:04:44] 2025-07-26 20:04:10,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 16:04:44] 2025-07-26 20:04:10,780 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,780 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,780 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,780 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,780 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | job 6745227309 has completed (purged errors)
[2025-07-26 16:04:44] 2025-07-26 20:04:10,781 | INFO     | overall cleanup function is called
[2025-07-26 16:04:44] 2025-07-26 20:04:11,790 | INFO     | --- collectZombieJob: --- 10, [3475822]
[2025-07-26 16:04:44] 2025-07-26 20:04:11,790 | INFO     | zombie collector waiting for pid 3475822
[2025-07-26 16:04:44] 2025-07-26 20:04:11,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:04:44] 2025-07-26 20:04:11,790 | INFO     | collected zombie processes
[2025-07-26 16:04:44] 2025-07-26 20:04:11,790 | INFO     | will attempt to kill all subprocesses of pid=3475822
[2025-07-26 16:04:44] 2025-07-26 20:04:12,274 | INFO     | process IDs to be killed: [3475822] (in reverse order)
[2025-07-26 16:04:44] 2025-07-26 20:04:12,449 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:04:44] 2025-07-26 20:04:12,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:04:44] 2025-07-26 20:04:12,469 | INFO     | did not find any defunct processes belonging to 3475822
[2025-07-26 16:04:44] 2025-07-26 20:04:12,484 | INFO     | did not find any defunct processes belonging to 3475822
[2025-07-26 16:04:44] 2025-07-26 20:04:12,485 | INFO     | ready for new job
[2025-07-26 16:04:44] 2025-07-26 20:04:12,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:04:44] 2025-07-26 20:04:12,488 | INFO     | ***************************************
[2025-07-26 16:04:44] 2025-07-26 20:04:12,488 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:04:44] 2025-07-26 20:04:12,488 | INFO     | ***************************************
[2025-07-26 16:04:44] 2025-07-26 20:04:12,488 | INFO     | 
[2025-07-26 16:04:44] 2025-07-26 20:04:12,505 | INFO     | architecture information:
[2025-07-26 16:04:44] 2025-07-26 20:04:12,506 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:04:44] 2025-07-26 20:04:12,524 | INFO     | cat /etc/os-release:
[2025-07-26 16:04:44] NAME="CentOS Linux"
[2025-07-26 16:04:44] VERSION="7 (Core)"
[2025-07-26 16:04:44] ID="centos"
[2025-07-26 16:04:44] ID_LIKE="rhel fedora"
[2025-07-26 16:04:44] VERSION_ID="7"
[2025-07-26 16:04:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:04:44] ANSI_COLOR="0;31"
[2025-07-26 16:04:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:04:44] HOME_URL="https://www.centos.org/"
[2025-07-26 16:04:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:04:44] 
[2025-07-26 16:04:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:04:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:04:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:04:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:04:44] 
[2025-07-26 16:04:44] 2025-07-26 20:04:12,524 | INFO     | ***************************************
[2025-07-26 16:04:44] 2025-07-26 20:04:13,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 16:04:44] 2025-07-26 20:04:13,049 | INFO     | sufficient remaining disk space (75870765056 B)
[2025-07-26 16:04:44] 2025-07-26 20:04:13,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:04:44] 2025-07-26 20:04:13,049 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:04:44] 2025-07-26 20:04:13,049 | INFO     | update_server=False
[2025-07-26 16:04:44] 2025-07-26 20:04:13,050 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:04:44] 2025-07-26 20:04:13,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:04:44] 2025-07-26 20:04:13,050 | INFO     | aborting loop
[2025-07-26 16:04:44] 2025-07-26 20:04:13,234 | INFO     | all data control threads have been joined
[2025-07-26 16:04:44] 2025-07-26 20:04:13,658 | INFO     | all payload control threads have been joined
[2025-07-26 16:04:44] 2025-07-26 20:04:14,054 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:14,055 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:14,240 | INFO     | [data] control thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:14,311 | INFO     | all job control threads have been joined
[2025-07-26 16:04:44] 2025-07-26 20:04:14,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:04:44] 2025-07-26 20:04:14,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:04:44] 2025-07-26 20:04:14,582 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:14,641 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:14,664 | INFO     | [payload] control thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:14,788 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:15,317 | INFO     | [job] control thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:15,345 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:15,355 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:15,358 | INFO     | [job] validate thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:15,475 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:15,493 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:15,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:04:44] 2025-07-26 20:04:16,399 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:16,679 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:18,472 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:04:44] 2025-07-26 20:04:19,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084192327488)>', '<ExcThread(monitor, started 140083697014528)>']
[2025-07-26 16:04:44] 2025-07-26 20:04:24,565 | INFO     | all workflow threads have been joined
[2025-07-26 16:04:44] 2025-07-26 20:04:24,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:04:44] 2025-07-26 20:04:24,566 | INFO     | traces error code: 0
[2025-07-26 16:04:44] 2025-07-26 20:04:24,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:04:44] 2025-07-26 20:04:44,249 | INFO     | PID=3467257 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 16:04:44] 2025-07-26 20:04:44,250 | INFO     | .. there are 25 such processes running
[2025-07-26 16:04:44] 2025-07-26 20:04:44,251 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:04:44] 2025-07-26 20:04:44,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:04:44] 2025-07-26 20:04:44,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:04:44] 2025-07-26 20:04:44,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:04:44] 2025-07-26 20:04:44,251 | INFO     | [monitor] control thread has ended
[2025-07-26 16:04:44] 2025-07-26 20:04:44,371 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:04:44] 2025-07-26 20:04:44,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:04:44] 2025-07-26 20:04:44,380 [wrapper] pilotpid: 3467257
[2025-07-26 16:04:44] 2025-07-26 20:04:44,385 [wrapper] Pilot exit status: 0
[2025-07-26 16:04:44] 2025-07-26 20:04:44,404 [wrapper] pandaids: 6745227309
[2025-07-26 16:04:44] 2025-07-26 20:04:44,531 [wrapper] cleanup supervisor_pilot 4074842 3467258
[2025-07-26 16:04:44] 2025-07-26 20:04:44,536 [wrapper] Test setup, not cleaning
[2025-07-26 16:04:44] 2025-07-26 20:04:44,541 [wrapper] apfmon messages muted
[2025-07-26 16:04:44] 2025-07-26 20:04:44,545 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:04:44] 2025-07-26 20:04:44,550 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:04:44]  *** Error codes and diagnostics ***
[2025-07-26 16:04:44]     "exeErrorCode": 0,
[2025-07-26 16:04:44]     "exeErrorDiag": "",
[2025-07-26 16:04:44]     "pilotErrorCode": 0,
[2025-07-26 16:04:44]     "pilotErrorDiag": "",
[2025-07-26 16:04:44]  *** Listing of results directory ***
[2025-07-26 16:04:44] total 349764
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 08:44 pilot3.tar.gz
[2025-07-26 16:04:44] -rwx------. 1 boincer umatlas     36292 Jul 26 09:03 runpilot2-wrapper.sh
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 09:03 queuedata.json
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas       100 Jul 26 14:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:04:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 14:34 run_atlas
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas       105 Jul 26 14:34 job.xml
[2025-07-26 16:04:44] -rw-r--r--. 2 boincer umatlas 146092280 Jul 26 14:35 EVNT.45743347._002194.pool.root.1
[2025-07-26 16:04:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 14:35 start_atlas.sh
[2025-07-26 16:04:44] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 14:35 shared
[2025-07-26 16:04:44] -rw-r--r--. 2 boincer umatlas    542886 Jul 26 14:35 input.tar.gz
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas         0 Jul 26 14:35 boinc_lockfile
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 14:35 pandaJob.out
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas    980125 Jul 26 14:35 agis_schedconf.cvmfs.json
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas   1593052 Jul 26 14:35 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:04:44] drwx------. 4 boincer umatlas      4096 Jul 26 14:35 pilot3
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas      6932 Jul 26 16:00 init_data.xml
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas 206547848 Jul 26 16:03 HITS.45743349._038312.pool.root.1
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas       529 Jul 26 16:03 boinc_task_state.xml
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas      1032 Jul 26 16:03 memory_monitor_summary.json
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas    315074 Jul 26 16:04 log.45743349._038312.job.log.tgz.1
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas      7774 Jul 26 16:04 heartbeat.json
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 16:04 boinc_mmap_file
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas        27 Jul 26 16:04 wrapper_checkpoint.txt
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas       823 Jul 26 16:04 pilotlog.txt
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas        95 Jul 26 16:04 pilot_heartbeat.json
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas    507421 Jul 26 16:04 log.45743349._038312.job.log.1
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas       357 Jul 26 16:04 output.list
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas       620 Jul 26 16:04 runtime_log
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas    839680 Jul 26 16:04 result.tar.gz
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 16:04 runtime_log.err
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas       653 Jul 26 16:04 k59LDmBktz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdBSLDmX6aTWm.diag
[2025-07-26 16:04:44] -rw-r--r--. 1 boincer umatlas     21447 Jul 26 16:04 stderr.txt
[2025-07-26 16:04:44] HITS file was successfully produced:
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas 206547848 Jul 26 16:03 shared/HITS.pool.root.1
[2025-07-26 16:04:44]  *** Contents of shared directory: ***
[2025-07-26 16:04:44] total 345756
[2025-07-26 16:04:44] -rw-r--r--. 2 boincer umatlas 146092280 Jul 26 14:35 ATLAS.root_0
[2025-07-26 16:04:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 14:35 start_atlas.sh
[2025-07-26 16:04:44] -rw-r--r--. 2 boincer umatlas    542886 Jul 26 14:35 input.tar.gz
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas 206547848 Jul 26 16:03 HITS.pool.root.1
[2025-07-26 16:04:44] -rw-------. 1 boincer umatlas    839680 Jul 26 16:04 result.tar.gz
16:04:46 (3463116): run_atlas exited; CPU time 38217.002056
16:04:46 (3463116): called boinc_finish(0)

</stderr_txt>
]]>

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