Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:05:47 (6561): wrapper (7.7.26015): starting
13:05:47 (6561): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 13:05:47] Arguments: --nthreads 8
[2025-07-27 13:05:47] Threads: 8
[2025-07-27 13:05:47] Checking for CVMFS
[2025-07-27 13:05:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:05:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:05:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:05:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:05:49] 2.11.2.0 11919 109558 111456 148809 0 109 22253623 25165824 4098 130560 0 64293701 99.834 48988139 3641 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 13:05:49] CVMFS is ok
[2025-07-27 13:05:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:05:49] Checking for apptainer binary...
[2025-07-27 13:05:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:05:49] Running /usr/bin/apptainer --version
[2025-07-27 13:05:50] apptainer version 1.3.2-1.el7
[2025-07-27 13:05:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:05:51] cg-vwn425.simple-grid.lan
[2025-07-27 13:05:51] apptainer works
[2025-07-27 13:05:51] Set ATHENA_PROC_NUMBER=8
[2025-07-27 13:05:51] Set ATHENA_CORE_NUMBER=8
[2025-07-27 13:05:51] Starting ATLAS job with PandaID=6745186028
[2025-07-27 13:05:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:51:29]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:51:29] 2025-07-27 15:38:04,984 | INFO     | intersect: -5509864552.831363
[2025-07-27 17:51:29] 2025-07-27 15:38:04,984 | INFO     | chi2: 0.012795896094363678
[2025-07-27 17:51:29] 2025-07-27 15:38:04,985 | INFO     | current chi2=0.012795896094363678 (change=99.26663902296255 %)
[2025-07-27 17:51:29] 2025-07-27 15:38:04,985 | INFO     | sum of square deviations: 5202255680.0
[2025-07-27 17:51:29] 2025-07-27 15:38:04,987 | INFO     | sum of deviations: 15716320020.5
[2025-07-27 17:51:29] 2025-07-27 15:38:04,988 | INFO     | mean x: 1753622840.5
[2025-07-27 17:51:29] 2025-07-27 15:38:04,988 | INFO     | mean y: 2502379.15234375
[2025-07-27 17:51:29] 2025-07-27 15:38:04,988 | INFO     | -- intersect: -5295295240.159637
[2025-07-27 17:51:29] 2025-07-27 15:38:04,988 | INFO     | intersect: -5295295240.159637
[2025-07-27 17:51:29] 2025-07-27 15:38:04,988 | INFO     | chi2: 0.0022933022631875725
[2025-07-27 17:51:29] 2025-07-27 15:38:04,988 | INFO     | current chi2=0.0022933022631875725 (change=82.07782990518558 %)
[2025-07-27 17:51:29] 2025-07-27 15:38:04,989 | INFO     | sum of square deviations: 4903347750.0
[2025-07-27 17:51:29] 2025-07-27 15:38:04,991 | INFO     | sum of deviations: 13429648309.000004
[2025-07-27 17:51:29] 2025-07-27 15:38:04,991 | INFO     | mean x: 1753622993.0
[2025-07-27 17:51:29] 2025-07-27 15:38:04,991 | INFO     | mean y: 2503544.541832669
[2025-07-27 17:51:29] 2025-07-27 15:38:04,992 | INFO     | -- intersect: -4800447676.400221
[2025-07-27 17:51:29] 2025-07-27 15:38:04,992 | INFO     | intersect: -4800447676.400221
[2025-07-27 17:51:29] 2025-07-27 15:38:04,992 | INFO     | chi2: 0.0011630703552782296
[2025-07-27 17:51:29] 2025-07-27 15:38:04,992 | INFO     | current chi2=0.0011630703552782296 (change=49.284035778972225 %)
[2025-07-27 17:51:29] 2025-07-27 15:38:04,993 | INFO     | sum of square deviations: 4616114457.5
[2025-07-27 17:51:29] 2025-07-27 15:38:04,995 | INFO     | sum of deviations: 11783870108.5
[2025-07-27 17:51:29] 2025-07-27 15:38:04,995 | INFO     | mean x: 1753623145.5
[2025-07-27 17:51:29] 2025-07-27 15:38:04,995 | INFO     | mean y: 2504417.7682926827
[2025-07-27 17:51:29] 2025-07-27 15:38:04,995 | INFO     | -- intersect: -4474088950.114245
[2025-07-27 17:51:29] 2025-07-27 15:38:04,995 | INFO     | intersect: -4474088950.114245
[2025-07-27 17:51:29] 2025-07-27 15:38:04,996 | INFO     | chi2: 0.0007155788550204354
[2025-07-27 17:51:29] 2025-07-27 15:38:04,996 | INFO     | current chi2=0.0007155788550204354 (change=38.47501556780245 %)
[2025-07-27 17:51:29] 2025-07-27 15:38:04,996 | INFO     | sum of square deviations: 4340323240.0
[2025-07-27 17:51:29] 2025-07-27 15:38:04,998 | INFO     | sum of deviations: 10529605036.000004
[2025-07-27 17:51:29] 2025-07-27 15:38:04,999 | INFO     | mean x: 1753623298.0
[2025-07-27 17:51:29] 2025-07-27 15:38:04,999 | INFO     | mean y: 2505110.925311203
[2025-07-27 17:51:29] 2025-07-27 15:38:04,999 | INFO     | -- intersect: -4251777275.164379
[2025-07-27 17:51:29] 2025-07-27 15:38:04,999 | INFO     | intersect: -4251777275.164379
[2025-07-27 17:51:29] 2025-07-27 15:38:04,999 | INFO     | chi2: 0.0005241513083965472
[2025-07-27 17:51:29] 2025-07-27 15:38:04,999 | INFO     | current chi2=0.0005241513083965472 (change=26.751425825518773 %)
[2025-07-27 17:51:29] 2025-07-27 15:38:05,000 | INFO     | sum of square deviations: 4075741535.0
[2025-07-27 17:51:29] 2025-07-27 15:38:05,002 | INFO     | sum of deviations: 9451662812.0
[2025-07-27 17:51:29] 2025-07-27 15:38:05,002 | INFO     | mean x: 1753623450.5
[2025-07-27 17:51:29] 2025-07-27 15:38:05,002 | INFO     | mean y: 2505731.7627118644
[2025-07-27 17:51:29] 2025-07-27 15:38:05,002 | INFO     | -- intersect: -4064154877.3580704
[2025-07-27 17:51:29] 2025-07-27 15:38:05,002 | INFO     | intersect: -4064154877.3580704
[2025-07-27 17:51:29] 2025-07-27 15:38:05,003 | INFO     | chi2: 0.00039776925966385885
[2025-07-27 17:51:29] 2025-07-27 15:38:05,003 | INFO     | current chi2=0.00039776925966385885 (change=24.111749166344513 %)
[2025-07-27 17:51:29] 2025-07-27 15:38:05,003 | INFO     | left removable region: 60
[2025-07-27 17:51:29] 2025-07-27 15:38:05,003 | INFO     | sum of square deviations: 2480604650.0
[2025-07-27 17:51:29] 2025-07-27 15:38:05,005 | INFO     | sum of deviations: 5438549275.500003
[2025-07-27 17:51:29] 2025-07-27 15:38:05,005 | INFO     | mean x: 1753624182.5
[2025-07-27 17:51:29] 2025-07-27 15:38:05,005 | INFO     | mean y: 2507906.555
[2025-07-27 17:51:29] 2025-07-27 15:38:05,005 | INFO     | -- intersect: -3842188396.515568
[2025-07-27 17:51:29] 2025-07-27 15:38:05,005 | INFO     | intersect: -3842188396.515568
[2025-07-27 17:51:29] 2025-07-27 15:38:05,006 | INFO     | chi2: 0.0002195192889054176
[2025-07-27 17:51:29] 2025-07-27 15:38:05,006 | INFO     | -- intersect: -3842188396.515568
[2025-07-27 17:51:29] 2025-07-27 15:38:05,006 | INFO     | current memory leak: 2.19 B/s (using 200 data points, chi2=0.00)
[2025-07-27 17:51:29] 2025-07-27 15:38:05,007 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 17:51:29] 2025-07-27 15:38:05,007 | INFO     | ..............................
[2025-07-27 17:51:29] 2025-07-27 15:38:05,007 | INFO     | . Timing measurements:
[2025-07-27 17:51:29] 2025-07-27 15:38:05,007 | INFO     | . get job = 0 s
[2025-07-27 17:51:29] 2025-07-27 15:38:05,007 | INFO     | . initial setup = 2 s
[2025-07-27 17:51:29] 2025-07-27 15:38:05,007 | INFO     | . payload setup = 20 s
[2025-07-27 17:51:29] 2025-07-27 15:38:05,007 | INFO     | . stage-in = 0 s
[2025-07-27 17:51:29] 2025-07-27 15:38:05,008 | INFO     | . payload execution = 16233 s
[2025-07-27 17:51:29] 2025-07-27 15:38:05,008 | INFO     | . stage-out = 1 s
[2025-07-27 17:51:29] 2025-07-27 15:38:05,008 | INFO     | . log creation = 0 s
[2025-07-27 17:51:29] 2025-07-27 15:38:05,008 | INFO     | ..............................
[2025-07-27 17:51:29] 2025-07-27 15:38:05,132 | INFO     | 
[2025-07-27 17:51:29] 2025-07-27 15:38:05,132 | INFO     | job summary report
[2025-07-27 17:51:29] 2025-07-27 15:38:05,132 | INFO     | --------------------------------------------------
[2025-07-27 17:51:29] 2025-07-27 15:38:05,132 | INFO     | PanDA job id: 6745186028
[2025-07-27 17:51:29] 2025-07-27 15:38:05,132 | INFO     | task id: 45743349
[2025-07-27 17:51:29] 2025-07-27 15:38:05,132 | INFO     | errors: (none)
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | pilot state: finished 
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | transexitcode: 0
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | exeerrorcode: 0
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | exeerrordiag: 
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | exitcode: 0
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | exitmsg: OK
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | cpuconsumptiontime: 62535 s
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | nevents: 400
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | neventsw: 0
[2025-07-27 17:51:29] 2025-07-27 15:38:05,133 | INFO     | pid: 17175
[2025-07-27 17:51:29] 2025-07-27 15:38:05,134 | INFO     | pgrp: 17175
[2025-07-27 17:51:29] 2025-07-27 15:38:05,134 | INFO     | corecount: 8
[2025-07-27 17:51:29] 2025-07-27 15:38:05,134 | INFO     | event service: False
[2025-07-27 17:51:29] 2025-07-27 15:38:05,134 | INFO     | sizes: {0: 2396647, 1: 2397504, 2: 2397504, 13: 2397850, 23: 2397850, 16257: 2428952, 16260: 2437952, 16263: 2438036, 16277: 2438230}
[2025-07-27 17:51:29] 2025-07-27 15:38:05,134 | INFO     | --------------------------------------------------
[2025-07-27 17:51:29] 2025-07-27 15:38:05,134 | INFO     | 
[2025-07-27 17:51:29] 2025-07-27 15:38:05,134 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-07-27 17:51:29] 2025-07-27 15:38:05,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:51:29] 2025-07-27 15:38:05,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:51:29] 2025-07-27 15:38:05,164 | INFO     | job 6745186028 has completed (purged errors)
[2025-07-27 17:51:29] 2025-07-27 15:38:05,164 | INFO     | overall cleanup function is called
[2025-07-27 17:51:29] 2025-07-27 15:38:06,172 | INFO     | --- collectZombieJob: --- 10, [17175]
[2025-07-27 17:51:29] 2025-07-27 15:38:06,172 | INFO     | zombie collector waiting for pid 17175
[2025-07-27 17:51:29] 2025-07-27 15:38:06,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:51:29] 2025-07-27 15:38:06,173 | INFO     | collected zombie processes
[2025-07-27 17:51:29] 2025-07-27 15:38:06,173 | INFO     | will attempt to kill all subprocesses of pid=17175
[2025-07-27 17:51:29] 2025-07-27 15:38:06,271 | INFO     | process IDs to be killed: [17175] (in reverse order)
[2025-07-27 17:51:29] 2025-07-27 15:38:06,342 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:51:29] 2025-07-27 15:38:06,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:51:29] 2025-07-27 15:38:06,345 | INFO     | did not find any defunct processes belonging to 17175
[2025-07-27 17:51:29] 2025-07-27 15:38:06,348 | INFO     | did not find any defunct processes belonging to 17175
[2025-07-27 17:51:29] 2025-07-27 15:38:06,349 | INFO     | ready for new job
[2025-07-27 17:51:29] 2025-07-27 15:38:06,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:51:29] 2025-07-27 15:38:06,351 | INFO     | ***************************************
[2025-07-27 17:51:29] 2025-07-27 15:38:06,351 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:51:29] 2025-07-27 15:38:06,351 | INFO     | ***************************************
[2025-07-27 17:51:29] 2025-07-27 15:38:06,351 | INFO     | 
[2025-07-27 17:51:29] 2025-07-27 15:38:06,352 | INFO     | pilot is running in a VM
[2025-07-27 17:51:29] 2025-07-27 15:38:06,352 | INFO     | architecture information:
[2025-07-27 17:51:29] 2025-07-27 15:38:06,352 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:51:29] 2025-07-27 15:38:06,379 | INFO     | cat /etc/os-release:
[2025-07-27 17:51:29] NAME="CentOS Linux"
[2025-07-27 17:51:29] VERSION="7 (Core)"
[2025-07-27 17:51:29] ID="centos"
[2025-07-27 17:51:29] ID_LIKE="rhel fedora"
[2025-07-27 17:51:29] VERSION_ID="7"
[2025-07-27 17:51:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:51:29] ANSI_COLOR="0;31"
[2025-07-27 17:51:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:51:29] HOME_URL="https://www.centos.org/"
[2025-07-27 17:51:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:51:29] 
[2025-07-27 17:51:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:51:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:51:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:51:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:51:29] 
[2025-07-27 17:51:29] 2025-07-27 15:38:06,379 | INFO     | ***************************************
[2025-07-27 17:51:29] 2025-07-27 15:38:06,882 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-07-27 17:51:29] 2025-07-27 15:38:07,064 | INFO     | sufficient remaining disk space (496732471296 B)
[2025-07-27 17:51:29] 2025-07-27 15:38:07,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:51:29] 2025-07-27 15:38:07,065 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:51:29] 2025-07-27 15:38:07,065 | INFO     | update_server=False
[2025-07-27 17:51:29] 2025-07-27 15:38:07,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:51:29] 2025-07-27 15:38:07,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:51:29] 2025-07-27 15:38:07,066 | INFO     | aborting loop
[2025-07-27 17:51:29] 2025-07-27 15:38:07,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:51:29] 2025-07-27 15:38:07,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:51:29] 2025-07-27 15:38:07,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:51:29] 2025-07-27 15:38:07,248 | INFO     | all job control threads have been joined
[2025-07-27 17:51:29] 2025-07-27 15:38:07,975 | INFO     | all data control threads have been joined
[2025-07-27 17:51:29] 2025-07-27 15:38:08,070 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:08,073 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:08,075 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:08,102 | INFO     | all payload control threads have been joined
[2025-07-27 17:51:29] 2025-07-27 15:38:08,254 | INFO     | [job] control thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:08,282 | INFO     | [job] validate thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:08,329 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:08,366 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:08,956 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:08,981 | INFO     | [data] control thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:09,072 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:09,108 | INFO     | [payload] control thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:09,139 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:09,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:09,344 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:09,524 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:11,076 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:51:29] 2025-07-27 15:38:11,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140405075158848)>', '<ExcThread(monitor, started 140404418668288)>']
[2025-07-27 17:51:29] 2025-07-27 15:38:16,610 | INFO     | all workflow threads have been joined
[2025-07-27 17:51:29] 2025-07-27 15:38:16,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:51:29] 2025-07-27 15:38:16,610 | INFO     | traces error code: 0
[2025-07-27 17:51:29] 2025-07-27 15:38:16,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:51:29] 2025-07-27 15:38:36,893 | INFO     | PID=10559 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 17:51:29] 2025-07-27 15:38:36,894 | INFO     | .. there are 9 such processes running
[2025-07-27 17:51:29] 2025-07-27 15:38:36,894 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:51:29] 2025-07-27 15:38:36,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:51:29] 2025-07-27 15:38:36,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:51:29] 2025-07-27 15:38:36,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:51:29] 2025-07-27 15:38:36,894 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 17:51:29] 2025-07-27 15:38:36,894 | INFO     | [monitor] control thread has ended
[2025-07-27 17:51:29] 2025-07-27 15:38:37,104 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:51:29] 2025-07-27 15:38:37,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:51:29] 2025-07-27 15:38:37,167 [wrapper] pilotpid: 10559
[2025-07-27 17:51:29] 2025-07-27 15:38:37,202 [wrapper] Pilot exit status: 0
[2025-07-27 17:51:29] 2025-07-27 15:38:37,622 [wrapper] pandaids: 6745186028
[2025-07-27 17:51:29] 2025-07-27 15:38:38,569 [wrapper] cleanup supervisor_pilot 32251 10560
[2025-07-27 17:51:29] 2025-07-27 15:38:38,643 [wrapper] Test setup, not cleaning
[2025-07-27 17:51:29] 2025-07-27 15:38:38,763 [wrapper] apfmon messages muted
[2025-07-27 17:51:29] 2025-07-27 15:38:38,901 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:51:29] 2025-07-27 15:38:39,017 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:51:29]  *** Error codes and diagnostics ***
[2025-07-27 17:51:29]     "exeErrorCode": 0,
[2025-07-27 17:51:29]     "exeErrorDiag": "",
[2025-07-27 17:51:29]     "pilotErrorCode": 0,
[2025-07-27 17:51:29]     "pilotErrorDiag": "",
[2025-07-27 17:51:29]  *** Listing of results directory ***
[2025-07-27 17:51:29] total 400104
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc    530466 Jul 26 14:28 pilot3.tar.gz
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc      5112 Jul 26 14:36 queuedata.json
[2025-07-27 17:51:29] -rwx------. 1 boinc boinc     36292 Jul 26 14:38 runpilot2-wrapper.sh
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc       100 Jul 27 13:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:51:29] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 13:05 run_atlas
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc       105 Jul 27 13:05 job.xml
[2025-07-27 17:51:29] -rw-r--r--. 2 boinc boinc 187984372 Jul 27 13:05 EVNT.45743347._002172.pool.root.1
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc      6393 Jul 27 13:05 init_data.xml
[2025-07-27 17:51:29] -rw-r--r--. 2 boinc boinc     15095 Jul 27 13:05 start_atlas.sh
[2025-07-27 17:51:29] drwxrwx--x. 2 boinc boinc        68 Jul 27 13:05 shared
[2025-07-27 17:51:29] -rw-r--r--. 2 boinc boinc    542898 Jul 27 13:05 input.tar.gz
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc         0 Jul 27 13:05 boinc_lockfile
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc      2563 Jul 27 13:05 pandaJob.out
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc    980117 Jul 27 13:06 agis_schedconf.cvmfs.json
[2025-07-27 17:51:29] drwx------. 4 boinc boinc      4096 Jul 27 13:06 pilot3
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc 214228146 Jul 27 17:37 HITS.45743349._037954.pool.root.1
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc       530 Jul 27 17:37 boinc_task_state.xml
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc      1017 Jul 27 17:37 memory_monitor_summary.json
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc   1593052 Jul 27 17:37 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc    403699 Jul 27 17:37 log.45743349._037954.job.log.tgz.1
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc        95 Jul 27 17:37 pilot_heartbeat.json
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc      7773 Jul 27 17:38 heartbeat.json
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc       890 Jul 27 17:38 pilotlog.txt
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc   1414446 Jul 27 17:38 log.45743349._037954.job.log.1
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc       357 Jul 27 17:38 output.list
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc       620 Jul 27 17:38 runtime_log
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc   1832960 Jul 27 17:38 result.tar.gz
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc      8674 Jul 27 17:38 runtime_log.err
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc       657 Jul 27 17:38 K9VKDmXLtz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUl0KDm8DI0Dm.diag
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc      8192 Jul 27 17:51 boinc_mmap_file
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc        28 Jul 27 17:51 wrapper_checkpoint.txt
[2025-07-27 17:51:29] -rw-r--r--. 1 boinc boinc     20650 Jul 27 17:51 stderr.txt
[2025-07-27 17:51:29] HITS file was successfully produced:
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc 214228146 Jul 27 17:37 shared/HITS.pool.root.1
[2025-07-27 17:51:29]  *** Contents of shared directory: ***
[2025-07-27 17:51:29] total 395128
[2025-07-27 17:51:29] -rw-r--r--. 2 boinc boinc 187984372 Jul 27 13:05 ATLAS.root_0
[2025-07-27 17:51:29] -rw-r--r--. 2 boinc boinc     15095 Jul 27 13:05 start_atlas.sh
[2025-07-27 17:51:29] -rw-r--r--. 2 boinc boinc    542898 Jul 27 13:05 input.tar.gz
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc 214228146 Jul 27 17:37 HITS.pool.root.1
[2025-07-27 17:51:29] -rw-------. 1 boinc boinc   1832960 Jul 27 17:38 result.tar.gz
17:51:31 (6561): run_atlas exited; CPU time 62743.405556
17:51:31 (6561): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN