Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:55:18 (15084): wrapper (7.7.26015): starting
13:55:18 (15084): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 13:55:18] Arguments: --nthreads 12
[2025-07-26 13:55:18] Threads: 12
[2025-07-26 13:55:18] Checking for CVMFS
[2025-07-26 13:55:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 13:55:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 13:55:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 13:55:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 13:55:18] 2.11.2.0 2924 110842 97772 148784 3 57 14880112 20275201 1 130560 0 38832535 99.971 10224884 11239 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 13:55:18] CVMFS is ok
[2025-07-26 13:55:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 13:55:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 13:55:18] Further information can be found at the LHC@home message board.
[2025-07-26 13:55:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 13:55:18] Checking for apptainer binary...
[2025-07-26 13:55:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 13:55:18] Running /usr/bin/apptainer --version
[2025-07-26 13:55:18] apptainer version 1.3.2-1.el7
[2025-07-26 13:55:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 13:55:20] c-205-28.aglt2.org
[2025-07-26 13:55:20] apptainer works
[2025-07-26 13:55:20] Set ATHENA_PROC_NUMBER=12
[2025-07-26 13:55:20] Set ATHENA_CORE_NUMBER=12
[2025-07-26 13:55:20] Starting ATLAS job with PandaID=6744843874
[2025-07-26 13:55:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 15:20:48]  *** The last 200 lines of the pilot log: ***
[2025-07-26 15:20:48] 2025-07-26 19:20:06,842 | INFO     | adding to output.list: log.45743349._003403.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/23/log.45743349._003403.job.log.tg
[2025-07-26 15:20:48] 2025-07-26 19:20:06,843 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 15:20:48] 2025-07-26 19:20:06,843 | INFO     | summary of transferred files:
[2025-07-26 15:20:48] 2025-07-26 19:20:06,844 | INFO     |  -- lfn=log.45743349._003403.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 15:20:48] 2025-07-26 19:20:06,844 | INFO     | stage-out finished correctly
[2025-07-26 15:20:48] 2025-07-26 19:20:07,221 | WARNING  | process 25114 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 15:20:48] 2025-07-26 19:20:07,221 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744843874/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 15:20:48] 2025-07-26 19:20:07,222 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744843874/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 15:20:48] 2025-07-26 19:20:07,222 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3999330 B
[2025-07-26 15:20:48] 2025-07-26 19:20:07,223 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16014 B
[2025-07-26 15:20:48] 2025-07-26 19:20:07,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 15:20:48] 2025-07-26 19:20:07,240 | INFO     | sufficient remaining disk space (29429334016 B)
[2025-07-26 15:20:48] 2025-07-26 19:20:07,240 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 15:20:48] 2025-07-26 19:20:07,241 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6744843874: 4301928 B (within 2537553920 B limit)
[2025-07-26 15:20:48] 2025-07-26 19:20:07,241 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6744843874/HITS.45743349._003403.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 15:20:48] 2025-07-26 19:20:07,241 | INFO     | total size of present files: 0 B (workdir size: 4301928 B)
[2025-07-26 15:20:48] 2025-07-26 19:20:07,242 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6744843874/HITS.45743349._003403.pool.root.1 since it does not exist
[2025-07-26 15:20:48] 2025-07-26 19:20:07,337 | INFO     | number of running child processes to parent process 25114: 1
[2025-07-26 15:20:48] 2025-07-26 19:20:07,337 | INFO     | maximum number of monitored processes: 6
[2025-07-26 15:20:48] 2025-07-26 19:20:09,682 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 15:20:48] 2025-07-26 19:20:09,840 | INFO     | monitor loop #379: job 0:6744843874 is in state 'finished'
[2025-07-26 15:20:48] 2025-07-26 19:20:09,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 15:20:48] 2025-07-26 19:20:09,936 | INFO     | job 6744843874 has state=finished
[2025-07-26 15:20:48] 2025-07-26 19:20:09,937 | INFO     | preparing for final server update for job 6744843874 in state='finished'
[2025-07-26 15:20:48] 2025-07-26 19:20:09,937 | INFO     | this job has now completed (state=finished)
[2025-07-26 15:20:48] 2025-07-26 19:20:09,937 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 15:20:48] 2025-07-26 19:20:09,938 | INFO     | log transfer has been attempted: DONE
[2025-07-26 15:20:48] 2025-07-26 19:20:09,938 | INFO     | job 6744843874 has finished - writing final server update
[2025-07-26 15:20:48] 2025-07-26 19:20:09,938 | INFO     | total number of processed events: 400 (read)
[2025-07-26 15:20:48] 2025-07-26 19:20:09,939 | INFO     | executing command: lscpu
[2025-07-26 15:20:48] 2025-07-26 19:20:09,966 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 15:20:48] 2025-07-26 19:20:12,344 | INFO     | monitor loop #380: job 0:6744843874 is in state 'finished'
[2025-07-26 15:20:48] 2025-07-26 19:20:12,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 15:20:48] 2025-07-26 19:20:14,847 | INFO     | monitor loop #381: job 0:6744843874 is in state 'finished'
[2025-07-26 15:20:48] 2025-07-26 19:20:14,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 15:20:48] 2025-07-26 19:20:15,021 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 15:20:48] 2025-07-26 19:20:15,025 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-26 15:20:48] 2025-07-26 19:20:15,027 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744843874/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 15:20:48] 2025-07-26 19:20:15,028 | INFO     | extracted standard info from prmon json
[2025-07-26 15:20:48] 2025-07-26 19:20:15,028 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 15:20:48] 2025-07-26 19:20:15,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 15:20:48] 2025-07-26 19:20:15,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 15:20:48] 2025-07-26 19:20:15,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 15:20:48] 2025-07-26 19:20:15,031 | INFO     | fitting pss+swap vs Time
[2025-07-26 15:20:48] 2025-07-26 19:20:15,031 | INFO     | sum of square deviations: 136095575.0
[2025-07-26 15:20:48] 2025-07-26 19:20:15,032 | INFO     | sum of deviations: 374142890.0000001
[2025-07-26 15:20:48] 2025-07-26 19:20:15,032 | INFO     | mean x: 1753555157.5
[2025-07-26 15:20:48] 2025-07-26 19:20:15,032 | INFO     | mean y: 2680487.789473684
[2025-07-26 15:20:48] 2025-07-26 19:20:15,032 | INFO     | -- intersect: -4818050784.343771
[2025-07-26 15:20:48] 2025-07-26 19:20:15,033 | INFO     | intersect: -4818050784.343771
[2025-07-26 15:20:48] 2025-07-26 19:20:15,033 | INFO     | chi2: 0.044919018818158504
[2025-07-26 15:20:48] 2025-07-26 19:20:15,033 | INFO     | -- intersect: -4818050784.343771
[2025-07-26 15:20:48] 2025-07-26 19:20:15,033 | INFO     | current memory leak: 2.75 B/s (using 76 data points, chi2=0.04)
[2025-07-26 15:20:48] 2025-07-26 19:20:15,034 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-07-26 15:20:48] 2025-07-26 19:20:15,034 | INFO     | ..............................
[2025-07-26 15:20:48] 2025-07-26 19:20:15,034 | INFO     | . Timing measurements:
[2025-07-26 15:20:48] 2025-07-26 19:20:15,034 | INFO     | . get job = 0 s
[2025-07-26 15:20:48] 2025-07-26 19:20:15,034 | INFO     | . initial setup = 2 s
[2025-07-26 15:20:48] 2025-07-26 19:20:15,034 | INFO     | . payload setup = 9 s
[2025-07-26 15:20:48] 2025-07-26 19:20:15,034 | INFO     | . stage-in = 0 s
[2025-07-26 15:20:48] 2025-07-26 19:20:15,034 | INFO     | . payload execution = 5041 s
[2025-07-26 15:20:48] 2025-07-26 19:20:15,035 | INFO     | . stage-out = 0 s
[2025-07-26 15:20:48] 2025-07-26 19:20:15,035 | INFO     | . log creation = 0 s
[2025-07-26 15:20:48] 2025-07-26 19:20:15,035 | INFO     | ..............................
[2025-07-26 15:20:48] 2025-07-26 19:20:15,278 | INFO     | 
[2025-07-26 15:20:48] 2025-07-26 19:20:15,279 | INFO     | job summary report
[2025-07-26 15:20:48] 2025-07-26 19:20:15,279 | INFO     | --------------------------------------------------
[2025-07-26 15:20:48] 2025-07-26 19:20:15,279 | INFO     | PanDA job id: 6744843874
[2025-07-26 15:20:48] 2025-07-26 19:20:15,279 | INFO     | task id: 45743349
[2025-07-26 15:20:48] 2025-07-26 19:20:15,279 | INFO     | errors: (none)
[2025-07-26 15:20:48] 2025-07-26 19:20:15,279 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 15:20:48] 2025-07-26 19:20:15,280 | INFO     | pilot state: finished 
[2025-07-26 15:20:48] 2025-07-26 19:20:15,280 | INFO     | transexitcode: 0
[2025-07-26 15:20:48] 2025-07-26 19:20:15,280 | INFO     | exeerrorcode: 0
[2025-07-26 15:20:48] 2025-07-26 19:20:15,280 | INFO     | exeerrordiag: 
[2025-07-26 15:20:48] 2025-07-26 19:20:15,280 | INFO     | exitcode: 0
[2025-07-26 15:20:48] 2025-07-26 19:20:15,280 | INFO     | exitmsg: OK
[2025-07-26 15:20:48] 2025-07-26 19:20:15,281 | INFO     | cpuconsumptiontime: 54228 s
[2025-07-26 15:20:48] 2025-07-26 19:20:15,281 | INFO     | nevents: 400
[2025-07-26 15:20:48] 2025-07-26 19:20:15,281 | INFO     | neventsw: 0
[2025-07-26 15:20:48] 2025-07-26 19:20:15,281 | INFO     | pid: 25114
[2025-07-26 15:20:48] 2025-07-26 19:20:15,281 | INFO     | pgrp: 25114
[2025-07-26 15:20:48] 2025-07-26 19:20:15,281 | INFO     | corecount: 12
[2025-07-26 15:20:48] 2025-07-26 19:20:15,282 | INFO     | event service: False
[2025-07-26 15:20:48] 2025-07-26 19:20:15,282 | INFO     | sizes: {0: 2397298, 1: 2397497, 6: 2397759, 11: 2397787, 5055: 2424166, 5057: 2433164, 5060: 2433376, 5065: 2433570}
[2025-07-26 15:20:48] 2025-07-26 19:20:15,282 | INFO     | --------------------------------------------------
[2025-07-26 15:20:48] 2025-07-26 19:20:15,282 | INFO     | 
[2025-07-26 15:20:48] 2025-07-26 19:20:15,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 15:20:48] 2025-07-26 19:20:15,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 15:20:48] 2025-07-26 19:20:15,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 15:20:48] 2025-07-26 19:20:15,312 | INFO     | job 6744843874 has completed (purged errors)
[2025-07-26 15:20:48] 2025-07-26 19:20:15,312 | INFO     | overall cleanup function is called
[2025-07-26 15:20:48] 2025-07-26 19:20:15,565 | INFO     | PID=18700 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 15:20:48] 2025-07-26 19:20:16,320 | INFO     | --- collectZombieJob: --- 10, [25114]
[2025-07-26 15:20:48] 2025-07-26 19:20:16,320 | INFO     | zombie collector waiting for pid 25114
[2025-07-26 15:20:48] 2025-07-26 19:20:16,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 15:20:48] 2025-07-26 19:20:16,321 | INFO     | collected zombie processes
[2025-07-26 15:20:48] 2025-07-26 19:20:16,321 | INFO     | will attempt to kill all subprocesses of pid=25114
[2025-07-26 15:20:48] 2025-07-26 19:20:16,407 | INFO     | process IDs to be killed: [25114] (in reverse order)
[2025-07-26 15:20:48] 2025-07-26 19:20:16,459 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 15:20:48] 2025-07-26 19:20:16,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 15:20:48] 2025-07-26 19:20:16,463 | INFO     | did not find any defunct processes belonging to 25114
[2025-07-26 15:20:48] 2025-07-26 19:20:16,465 | INFO     | did not find any defunct processes belonging to 25114
[2025-07-26 15:20:48] 2025-07-26 19:20:16,466 | INFO     | ready for new job
[2025-07-26 15:20:48] 2025-07-26 19:20:16,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 15:20:48] 2025-07-26 19:20:16,605 | INFO     | ***************************************
[2025-07-26 15:20:48] 2025-07-26 19:20:16,605 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 15:20:48] 2025-07-26 19:20:16,605 | INFO     | ***************************************
[2025-07-26 15:20:48] 2025-07-26 19:20:16,605 | INFO     | 
[2025-07-26 15:20:48] 2025-07-26 19:20:16,605 | INFO     | architecture information:
[2025-07-26 15:20:48] 2025-07-26 19:20:16,606 | INFO     | executing command: cat /etc/os-release
[2025-07-26 15:20:48] 2025-07-26 19:20:16,622 | INFO     | cat /etc/os-release:
[2025-07-26 15:20:48] NAME="CentOS Linux"
[2025-07-26 15:20:48] VERSION="7 (Core)"
[2025-07-26 15:20:48] ID="centos"
[2025-07-26 15:20:48] ID_LIKE="rhel fedora"
[2025-07-26 15:20:48] VERSION_ID="7"
[2025-07-26 15:20:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 15:20:48] ANSI_COLOR="0;31"
[2025-07-26 15:20:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 15:20:48] HOME_URL="https://www.centos.org/"
[2025-07-26 15:20:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 15:20:48] 
[2025-07-26 15:20:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 15:20:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 15:20:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 15:20:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 15:20:48] 
[2025-07-26 15:20:48] 2025-07-26 19:20:16,622 | INFO     | ***************************************
[2025-07-26 15:20:48] 2025-07-26 19:20:17,125 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 15:20:48] 2025-07-26 19:20:17,144 | INFO     | sufficient remaining disk space (29434576896 B)
[2025-07-26 15:20:48] 2025-07-26 19:20:17,144 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 15:20:48] 2025-07-26 19:20:17,144 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 15:20:48] 2025-07-26 19:20:17,144 | INFO     | update_server=False
[2025-07-26 15:20:48] 2025-07-26 19:20:17,144 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 15:20:48] 2025-07-26 19:20:17,276 | INFO     | all payload control threads have been joined
[2025-07-26 15:20:48] 2025-07-26 19:20:17,351 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 15:20:48] 2025-07-26 19:20:17,351 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 15:20:48] 2025-07-26 19:20:17,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:20:48] 2025-07-26 19:20:17,351 | INFO     | will abort loop
[2025-07-26 15:20:48] 2025-07-26 19:20:17,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 15:20:48] 2025-07-26 19:20:18,037 | INFO     | all job control threads have been joined
[2025-07-26 15:20:48] 2025-07-26 19:20:18,150 | INFO     | [job] retrieve thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:18,179 | INFO     | all data control threads have been joined
[2025-07-26 15:20:48] 2025-07-26 19:20:18,281 | INFO     | [payload] control thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:18,314 | INFO     | [payload] failed_post thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:18,357 | INFO     | [job] job monitor thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:18,811 | INFO     | [data] copytool_in thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:18,910 | INFO     | [payload] validate_post thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:18,953 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:18,967 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:19,043 | INFO     | [job] control thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:19,184 | INFO     | [data] control thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:19,332 | INFO     | [job] validate thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:19,448 | INFO     | [data] copytool_out thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:19,454 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:19,616 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:20,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:20:48] 2025-07-26 19:20:20,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 15:20:48] 2025-07-26 19:20:21,134 | INFO     | [job] queue monitor thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:24,277 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 15:20:48] 2025-07-26 19:20:25,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658241062720)>', '<ExcThread(monitor, started 140657293260544)>']
[2025-07-26 15:20:48] 2025-07-26 19:20:30,985 | INFO     | all workflow threads have been joined
[2025-07-26 15:20:48] 2025-07-26 19:20:30,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 15:20:48] 2025-07-26 19:20:30,993 | INFO     | traces error code: 0
[2025-07-26 15:20:48] 2025-07-26 19:20:30,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 15:20:48] 2025-07-26 19:20:47,754 | INFO     | PID=18700 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 15:20:48] 2025-07-26 19:20:47,755 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 15:20:48] 2025-07-26 19:20:47,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 15:20:48] 2025-07-26 19:20:47,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 15:20:48] 2025-07-26 19:20:47,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 15:20:48] 2025-07-26 19:20:47,756 | INFO     | [monitor] control thread has ended
[2025-07-26 15:20:48] 2025-07-26 19:20:47,845 [wrapper] ==== pilot stdout END ====
[2025-07-26 15:20:48] 2025-07-26 19:20:47,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 15:20:48] 2025-07-26 19:20:47,851 [wrapper] pilotpid: 18700
[2025-07-26 15:20:48] 2025-07-26 19:20:47,855 [wrapper] Pilot exit status: 0
[2025-07-26 15:20:48] 2025-07-26 19:20:47,869 [wrapper] pandaids: 6744843874
[2025-07-26 15:20:48] 2025-07-26 19:20:47,909 [wrapper] cleanup supervisor_pilot  9546 18701
[2025-07-26 15:20:48] 2025-07-26 19:20:47,913 [wrapper] Test setup, not cleaning
[2025-07-26 15:20:48] 2025-07-26 19:20:47,917 [wrapper] apfmon messages muted
[2025-07-26 15:20:48] 2025-07-26 19:20:47,921 [wrapper] ==== wrapper stdout END ====
[2025-07-26 15:20:48] 2025-07-26 19:20:47,925 [wrapper] ==== wrapper stderr END ====
[2025-07-26 15:20:48]  *** Error codes and diagnostics ***
[2025-07-26 15:20:48]     "exeErrorCode": 0,
[2025-07-26 15:20:48]     "exeErrorDiag": "",
[2025-07-26 15:20:48]     "pilotErrorCode": 0,
[2025-07-26 15:20:48]     "pilotErrorDiag": "",
[2025-07-26 15:20:48]  *** Listing of results directory ***
[2025-07-26 15:20:48] total 392792
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas    530466 Jul 24 13:03 pilot3.tar.gz
[2025-07-26 15:20:48] -rwx------ 1 boincer umatlas     36292 Jul 24 13:21 runpilot2-wrapper.sh
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas      5112 Jul 24 13:21 queuedata.json
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas       100 Jul 26 13:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 15:20:48] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 13:55 run_atlas
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas       105 Jul 26 13:55 job.xml
[2025-07-26 15:20:48] -rw-r--r-- 2 boincer umatlas 186754792 Jul 26 13:55 EVNT.45743347._000191.pool.root.1
[2025-07-26 15:20:48] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 13:55 start_atlas.sh
[2025-07-26 15:20:48] drwxrwx--x 2 boincer umatlas      4096 Jul 26 13:55 shared
[2025-07-26 15:20:48] -rw-r--r-- 2 boincer umatlas    542884 Jul 26 13:55 input.tar.gz
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas         0 Jul 26 13:55 boinc_lockfile
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas      2560 Jul 26 13:55 pandaJob.out
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas    980125 Jul 26 13:55 agis_schedconf.cvmfs.json
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas   1593052 Jul 26 13:55 agis_ddmendpoints.agis.ALL.json
[2025-07-26 15:20:48] drwx------ 4 boincer umatlas      4096 Jul 26 13:55 pilot3
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 15:18 init_data.xml
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas 209905414 Jul 26 15:19 HITS.45743349._003403.pool.root.1
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas       530 Jul 26 15:19 boinc_task_state.xml
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas      1050 Jul 26 15:20 memory_monitor_summary.json
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas    361539 Jul 26 15:20 log.45743349._003403.job.log.tgz.1
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas      7859 Jul 26 15:20 heartbeat.json
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 15:20 boinc_mmap_file
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas        27 Jul 26 15:20 wrapper_checkpoint.txt
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas        95 Jul 26 15:20 pilot_heartbeat.json
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas       745 Jul 26 15:20 pilotlog.txt
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas    483224 Jul 26 15:20 log.45743349._003403.job.log.1
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas       357 Jul 26 15:20 output.list
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas       620 Jul 26 15:20 runtime_log
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas    860160 Jul 26 15:20 result.tar.gz
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas       659 Jul 26 15:20 SgIMDmToEz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXkMLDmeM81pm.diag
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 15:20 runtime_log.err
[2025-07-26 15:20:48] -rw-r--r-- 1 boincer umatlas     22674 Jul 26 15:20 stderr.txt
[2025-07-26 15:20:48] HITS file was successfully produced:
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas 209905414 Jul 26 15:19 shared/HITS.pool.root.1
[2025-07-26 15:20:48]  *** Contents of shared directory: ***
[2025-07-26 15:20:48] total 388760
[2025-07-26 15:20:48] -rw-r--r-- 2 boincer umatlas 186754792 Jul 26 13:55 ATLAS.root_0
[2025-07-26 15:20:48] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 13:55 start_atlas.sh
[2025-07-26 15:20:48] -rw-r--r-- 2 boincer umatlas    542884 Jul 26 13:55 input.tar.gz
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas 209905414 Jul 26 15:19 HITS.pool.root.1
[2025-07-26 15:20:48] -rw------- 1 boincer umatlas    860160 Jul 26 15:20 result.tar.gz
15:20:49 (15084): run_atlas exited; CPU time 54187.765561
15:20:49 (15084): called boinc_finish(0)

</stderr_txt>
]]>

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