Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:53:49 (26038): wrapper (7.7.26015): starting
13:53:49 (26038): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 13:53:49] Arguments: --nthreads 8
[2025-07-26 13:53:49] Threads: 8
[2025-07-26 13:53:49] Checking for CVMFS
[2025-07-26 13:53:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 13:53:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 13:53:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 13:53:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 13:53:49] 2.11.2.0 2827 110887 84584 148784 2 57 14720364 20275200 1 130560 0 27811871 99.962 9773215 10621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 13:53:49] CVMFS is ok
[2025-07-26 13:53:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 13:53:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 13:53:49] Further information can be found at the LHC@home message board.
[2025-07-26 13:53:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 13:53:49] Checking for apptainer binary...
[2025-07-26 13:53:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 13:53:49] Running /usr/bin/apptainer --version
[2025-07-26 13:53:49] apptainer version 1.3.2-1.el7
[2025-07-26 13:53:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 13:53:51] c-115-13.aglt2.org
[2025-07-26 13:53:51] apptainer works
[2025-07-26 13:53:51] Set ATHENA_PROC_NUMBER=8
[2025-07-26 13:53:51] Set ATHENA_CORE_NUMBER=8
[2025-07-26 13:53:51] Starting ATLAS job with PandaID=6745185573
[2025-07-26 13:53:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:14:21]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:14:21] 2025-07-26 20:13:45,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:14:21] 2025-07-26 20:13:47,912 | INFO     | monitor loop #619: job 0:6745185573 is in state 'finished'
[2025-07-26 16:14:21] 2025-07-26 20:13:47,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:14:21] 2025-07-26 20:13:49,048 | INFO     | PID=29704 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 16:14:21] 2025-07-26 20:13:49,881 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 16:14:21] 2025-07-26 20:13:49,884 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-07-26 16:14:21] 2025-07-26 20:13:49,886 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745185573/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:14:21] 2025-07-26 20:13:49,887 | INFO     | extracted standard info from prmon json
[2025-07-26 16:14:21] 2025-07-26 20:13:49,887 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 16:14:21] 2025-07-26 20:13:49,888 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 16:14:21] 2025-07-26 20:13:49,888 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:14:21] 2025-07-26 20:13:49,888 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:14:21] 2025-07-26 20:13:49,891 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:14:21] 2025-07-26 20:13:49,891 | INFO     | sum of square deviations: 797291228.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,892 | INFO     | sum of deviations: 27292237103.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,892 | INFO     | mean x: 1753556627.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,892 | INFO     | mean y: 2462263.0875912406
[2025-07-26 16:14:21] 2025-07-26 20:13:49,892 | INFO     | -- intersect: -60023888908.08186
[2025-07-26 16:14:21] 2025-07-26 20:13:49,892 | INFO     | intersect: -60023888908.08186
[2025-07-26 16:14:21] 2025-07-26 20:13:49,892 | INFO     | chi2: 1.3430398950681164
[2025-07-26 16:14:21] 2025-07-26 20:13:49,893 | INFO     | sum of square deviations: 713140813.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,893 | INFO     | sum of deviations: 26097683497.000008
[2025-07-26 16:14:21] 2025-07-26 20:13:49,894 | INFO     | mean x: 1753556474.5
[2025-07-26 16:14:21] 2025-07-26 20:13:49,894 | INFO     | mean y: 2460097.3333333335
[2025-07-26 16:14:21] 2025-07-26 20:13:49,894 | INFO     | -- intersect: -64169665563.37564
[2025-07-26 16:14:21] 2025-07-26 20:13:49,894 | INFO     | intersect: -64169665563.37564
[2025-07-26 16:14:21] 2025-07-26 20:13:49,894 | INFO     | chi2: 1.3428576068054787
[2025-07-26 16:14:21] 2025-07-26 20:13:49,894 | INFO     | current chi2=1.3428576068054787 (change=0.013572810704064674 %)
[2025-07-26 16:14:21] 2025-07-26 20:13:49,894 | INFO     | right removable region: 131
[2025-07-26 16:14:21] 2025-07-26 20:13:49,895 | INFO     | sum of square deviations: 713140813.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,895 | INFO     | sum of deviations: 9005473340.500002
[2025-07-26 16:14:21] 2025-07-26 20:13:49,895 | INFO     | mean x: 1753556779.5
[2025-07-26 16:14:21] 2025-07-26 20:13:49,896 | INFO     | mean y: 2494782.977272727
[2025-07-26 16:14:21] 2025-07-26 20:13:49,896 | INFO     | -- intersect: -22141250941.529858
[2025-07-26 16:14:21] 2025-07-26 20:13:49,896 | INFO     | intersect: -22141250941.529858
[2025-07-26 16:14:21] 2025-07-26 20:13:49,896 | INFO     | chi2: 0.06341092028452701
[2025-07-26 16:14:21] 2025-07-26 20:13:49,896 | INFO     | current chi2=0.06341092028452701 (change=95.27855274311781 %)
[2025-07-26 16:14:21] 2025-07-26 20:13:49,896 | INFO     | sum of square deviations: 635130048.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,897 | INFO     | sum of deviations: 7530621166.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,897 | INFO     | mean x: 1753556932.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,897 | INFO     | mean y: 2497666.157480315
[2025-07-26 16:14:21] 2025-07-26 20:13:49,897 | INFO     | -- intersect: -20789107123.26861
[2025-07-26 16:14:21] 2025-07-26 20:13:49,897 | INFO     | intersect: -20789107123.26861
[2025-07-26 16:14:21] 2025-07-26 20:13:49,898 | INFO     | chi2: 0.06268225151743043
[2025-07-26 16:14:21] 2025-07-26 20:13:49,898 | INFO     | current chi2=0.06268225151743043 (change=1.1491218922971316 %)
[2025-07-26 16:14:21] 2025-07-26 20:13:49,898 | INFO     | left removable region: 20
[2025-07-26 16:14:21] 2025-07-26 20:13:49,898 | INFO     | sum of square deviations: 424045160.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,899 | INFO     | sum of deviations: 2004009820.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,899 | INFO     | mean x: 1753557054.0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,899 | INFO     | mean y: 2508278.1801801804
[2025-07-26 16:14:21] 2025-07-26 20:13:49,899 | INFO     | -- intersect: -8284688199.068304
[2025-07-26 16:14:21] 2025-07-26 20:13:49,899 | INFO     | intersect: -8284688199.068304
[2025-07-26 16:14:21] 2025-07-26 20:13:49,899 | INFO     | chi2: 0.0004913232073673282
[2025-07-26 16:14:21] 2025-07-26 20:13:49,899 | INFO     | -- intersect: -8284688199.068304
[2025-07-26 16:14:21] 2025-07-26 20:13:49,900 | INFO     | current memory leak: 4.73 B/s (using 111 data points, chi2=0.00)
[2025-07-26 16:14:21] 2025-07-26 20:13:49,900 | INFO     | could have reported an average CPU frequency of 2163 MHz (8 samples)
[2025-07-26 16:14:21] 2025-07-26 20:13:49,900 | INFO     | ..............................
[2025-07-26 16:14:21] 2025-07-26 20:13:49,900 | INFO     | . Timing measurements:
[2025-07-26 16:14:21] 2025-07-26 20:13:49,900 | INFO     | . get job = 0 s
[2025-07-26 16:14:21] 2025-07-26 20:13:49,900 | INFO     | . initial setup = 2 s
[2025-07-26 16:14:21] 2025-07-26 20:13:49,900 | INFO     | . payload setup = 11 s
[2025-07-26 16:14:21] 2025-07-26 20:13:49,901 | INFO     | . stage-in = 0 s
[2025-07-26 16:14:21] 2025-07-26 20:13:49,901 | INFO     | . payload execution = 8345 s
[2025-07-26 16:14:21] 2025-07-26 20:13:49,901 | INFO     | . stage-out = 0 s
[2025-07-26 16:14:21] 2025-07-26 20:13:49,901 | INFO     | . log creation = 0 s
[2025-07-26 16:14:21] 2025-07-26 20:13:49,901 | INFO     | ..............................
[2025-07-26 16:14:21] 2025-07-26 20:13:49,986 | INFO     | 
[2025-07-26 16:14:21] 2025-07-26 20:13:49,987 | INFO     | job summary report
[2025-07-26 16:14:21] 2025-07-26 20:13:49,987 | INFO     | --------------------------------------------------
[2025-07-26 16:14:21] 2025-07-26 20:13:49,987 | INFO     | PanDA job id: 6745185573
[2025-07-26 16:14:21] 2025-07-26 20:13:49,987 | INFO     | task id: 45743349
[2025-07-26 16:14:21] 2025-07-26 20:13:49,987 | INFO     | errors: (none)
[2025-07-26 16:14:21] 2025-07-26 20:13:49,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:14:21] 2025-07-26 20:13:49,988 | INFO     | pilot state: finished 
[2025-07-26 16:14:21] 2025-07-26 20:13:49,988 | INFO     | transexitcode: 0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,988 | INFO     | exeerrorcode: 0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,988 | INFO     | exeerrordiag: 
[2025-07-26 16:14:21] 2025-07-26 20:13:49,989 | INFO     | exitcode: 0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,989 | INFO     | exitmsg: OK
[2025-07-26 16:14:21] 2025-07-26 20:13:49,989 | INFO     | cpuconsumptiontime: 60094 s
[2025-07-26 16:14:21] 2025-07-26 20:13:49,989 | INFO     | nevents: 400
[2025-07-26 16:14:21] 2025-07-26 20:13:49,989 | INFO     | neventsw: 0
[2025-07-26 16:14:21] 2025-07-26 20:13:49,989 | INFO     | pid: 3883
[2025-07-26 16:14:21] 2025-07-26 20:13:49,990 | INFO     | pgrp: 3883
[2025-07-26 16:14:21] 2025-07-26 20:13:49,990 | INFO     | corecount: 8
[2025-07-26 16:14:21] 2025-07-26 20:13:49,990 | INFO     | event service: False
[2025-07-26 16:14:21] 2025-07-26 20:13:49,990 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 12: 2397793, 8360: 2425619, 8361: 2434801, 8367: 2434939}
[2025-07-26 16:14:21] 2025-07-26 20:13:49,990 | INFO     | --------------------------------------------------
[2025-07-26 16:14:21] 2025-07-26 20:13:49,990 | INFO     | 
[2025-07-26 16:14:21] 2025-07-26 20:13:49,990 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 16:14:21] 2025-07-26 20:13:50,019 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,020 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,020 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,020 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,023 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:14:21] 2025-07-26 20:13:50,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:14:21] 2025-07-26 20:13:50,024 | INFO     | job 6745185573 has completed (purged errors)
[2025-07-26 16:14:21] 2025-07-26 20:13:50,025 | INFO     | overall cleanup function is called
[2025-07-26 16:14:21] 2025-07-26 20:13:51,032 | INFO     | --- collectZombieJob: --- 10, [3883]
[2025-07-26 16:14:21] 2025-07-26 20:13:51,033 | INFO     | zombie collector waiting for pid 3883
[2025-07-26 16:14:21] 2025-07-26 20:13:51,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:14:21] 2025-07-26 20:13:51,033 | INFO     | collected zombie processes
[2025-07-26 16:14:21] 2025-07-26 20:13:51,033 | INFO     | will attempt to kill all subprocesses of pid=3883
[2025-07-26 16:14:21] 2025-07-26 20:13:51,121 | INFO     | process IDs to be killed: [3883] (in reverse order)
[2025-07-26 16:14:21] 2025-07-26 20:13:51,178 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:14:21] 2025-07-26 20:13:51,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:14:21] 2025-07-26 20:13:51,184 | INFO     | did not find any defunct processes belonging to 3883
[2025-07-26 16:14:21] 2025-07-26 20:13:51,188 | INFO     | did not find any defunct processes belonging to 3883
[2025-07-26 16:14:21] 2025-07-26 20:13:51,188 | INFO     | ready for new job
[2025-07-26 16:14:21] 2025-07-26 20:13:51,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:14:21] 2025-07-26 20:13:51,190 | INFO     | ***************************************
[2025-07-26 16:14:21] 2025-07-26 20:13:51,190 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:14:21] 2025-07-26 20:13:51,190 | INFO     | ***************************************
[2025-07-26 16:14:21] 2025-07-26 20:13:51,191 | INFO     | 
[2025-07-26 16:14:21] 2025-07-26 20:13:51,191 | INFO     | architecture information:
[2025-07-26 16:14:21] 2025-07-26 20:13:51,192 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:14:21] 2025-07-26 20:13:51,210 | INFO     | cat /etc/os-release:
[2025-07-26 16:14:21] NAME="CentOS Linux"
[2025-07-26 16:14:21] VERSION="7 (Core)"
[2025-07-26 16:14:21] ID="centos"
[2025-07-26 16:14:21] ID_LIKE="rhel fedora"
[2025-07-26 16:14:21] VERSION_ID="7"
[2025-07-26 16:14:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:14:21] ANSI_COLOR="0;31"
[2025-07-26 16:14:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:14:21] HOME_URL="https://www.centos.org/"
[2025-07-26 16:14:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:14:21] 
[2025-07-26 16:14:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:14:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:14:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:14:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:14:21] 
[2025-07-26 16:14:21] 2025-07-26 20:13:51,211 | INFO     | ***************************************
[2025-07-26 16:14:21] 2025-07-26 20:13:51,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 16:14:21] 2025-07-26 20:13:51,733 | INFO     | sufficient remaining disk space (18730713088 B)
[2025-07-26 16:14:21] 2025-07-26 20:13:51,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:14:21] 2025-07-26 20:13:51,734 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:14:21] 2025-07-26 20:13:51,734 | INFO     | update_server=False
[2025-07-26 16:14:21] 2025-07-26 20:13:51,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:14:21] 2025-07-26 20:13:51,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:14:21] 2025-07-26 20:13:51,735 | INFO     | aborting loop
[2025-07-26 16:14:21] 2025-07-26 20:13:51,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:14:21] 2025-07-26 20:13:52,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:14:21] 2025-07-26 20:13:52,583 | INFO     | all data control threads have been joined
[2025-07-26 16:14:21] 2025-07-26 20:13:52,737 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:52,740 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:52,741 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:52,972 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:53,091 | INFO     | [job] validate thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:53,119 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:53,130 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:53,205 | INFO     | all payload control threads have been joined
[2025-07-26 16:14:21] 2025-07-26 20:13:53,207 | INFO     | all job control threads have been joined
[2025-07-26 16:14:21] 2025-07-26 20:13:53,322 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:53,322 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:53,589 | INFO     | [data] control thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:53,702 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:54,037 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:54,209 | INFO     | [payload] control thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:54,213 | INFO     | [job] control thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:13:54,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:14:21] 2025-07-26 20:13:58,619 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:14:02,740 | INFO     | job.realtimelogging is not enabled
[2025-07-26 16:14:21] 2025-07-26 20:14:03,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:14:21] 2025-07-26 20:14:05,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698777433920)>', '<ExcThread(monitor, started 139697930086144)>']
[2025-07-26 16:14:21] 2025-07-26 20:14:10,224 | INFO     | all workflow threads have been joined
[2025-07-26 16:14:21] 2025-07-26 20:14:10,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:14:21] 2025-07-26 20:14:10,225 | INFO     | traces error code: 0
[2025-07-26 16:14:21] 2025-07-26 20:14:10,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:14:21] 2025-07-26 20:14:21,245 | INFO     | PID=29704 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 16:14:21] 2025-07-26 20:14:21,246 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:14:21] 2025-07-26 20:14:21,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:14:21] 2025-07-26 20:14:21,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:14:21] 2025-07-26 20:14:21,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:14:21] 2025-07-26 20:14:21,246 | INFO     | [monitor] control thread has ended
[2025-07-26 16:14:21] 2025-07-26 20:14:21,345 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:14:21] 2025-07-26 20:14:21,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:14:21] 2025-07-26 20:14:21,354 [wrapper] pilotpid: 29704
[2025-07-26 16:14:21] 2025-07-26 20:14:21,359 [wrapper] Pilot exit status: 0
[2025-07-26 16:14:21] 2025-07-26 20:14:21,377 [wrapper] pandaids: 6745185573
[2025-07-26 16:14:21] 2025-07-26 20:14:21,422 [wrapper] cleanup supervisor_pilot 31370 29705
[2025-07-26 16:14:21] 2025-07-26 20:14:21,427 [wrapper] Test setup, not cleaning
[2025-07-26 16:14:21] 2025-07-26 20:14:21,432 [wrapper] apfmon messages muted
[2025-07-26 16:14:21] 2025-07-26 20:14:21,437 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:14:21] 2025-07-26 20:14:21,442 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:14:21]  *** Error codes and diagnostics ***
[2025-07-26 16:14:21]     "exeErrorCode": 0,
[2025-07-26 16:14:21]     "exeErrorDiag": "",
[2025-07-26 16:14:21]     "pilotErrorCode": 0,
[2025-07-26 16:14:21]     "pilotErrorDiag": "",
[2025-07-26 16:14:21]  *** Listing of results directory ***
[2025-07-26 16:14:21] total 358848
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 07:39 pilot3.tar.gz
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 08:07 queuedata.json
[2025-07-26 16:14:21] -rwx------ 1 boincer umatlas     36292 Jul 26 08:07 runpilot2-wrapper.sh
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas       100 Jul 26 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:14:21] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 13:53 run_atlas
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas       105 Jul 26 13:53 job.xml
[2025-07-26 16:14:21] -rw-r--r-- 2 boincer umatlas 146156659 Jul 26 13:53 EVNT.45743347._002144.pool.root.1
[2025-07-26 16:14:21] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 13:53 start_atlas.sh
[2025-07-26 16:14:21] drwxrwx--x 2 boincer umatlas      4096 Jul 26 13:53 shared
[2025-07-26 16:14:21] -rw-r--r-- 2 boincer umatlas    542899 Jul 26 13:53 input.tar.gz
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas         0 Jul 26 13:53 boinc_lockfile
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 13:53 pandaJob.out
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas    980125 Jul 26 13:54 agis_schedconf.cvmfs.json
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas   1593052 Jul 26 13:54 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:14:21] drwx------ 4 boincer umatlas      4096 Jul 26 13:54 pilot3
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas      5825 Jul 26 16:11 init_data.xml
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas 215240491 Jul 26 16:13 HITS.45743349._037518.pool.root.1
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas       530 Jul 26 16:13 boinc_task_state.xml
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas      1051 Jul 26 16:13 memory_monitor_summary.json
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas    331483 Jul 26 16:13 log.45743349._037518.job.log.tgz.1
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas      7844 Jul 26 16:13 heartbeat.json
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas        27 Jul 26 16:14 wrapper_checkpoint.txt
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 16:14 boinc_mmap_file
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas        95 Jul 26 16:14 pilot_heartbeat.json
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas       745 Jul 26 16:14 pilotlog.txt
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas    762281 Jul 26 16:14 log.45743349._037518.job.log.1
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas       357 Jul 26 16:14 output.list
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas       620 Jul 26 16:14 runtime_log
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas   1116160 Jul 26 16:14 result.tar.gz
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 16:14 runtime_log.err
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas       660 Jul 26 16:14 OCmMDmhrsz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt3RLDmDtPnbm.diag
[2025-07-26 16:14:21] -rw-r--r-- 1 boincer umatlas     21209 Jul 26 16:14 stderr.txt
[2025-07-26 16:14:21] HITS file was successfully produced:
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas 215240491 Jul 26 16:13 shared/HITS.pool.root.1
[2025-07-26 16:14:21]  *** Contents of shared directory: ***
[2025-07-26 16:14:21] total 354572
[2025-07-26 16:14:21] -rw-r--r-- 2 boincer umatlas 146156659 Jul 26 13:53 ATLAS.root_0
[2025-07-26 16:14:21] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 13:53 start_atlas.sh
[2025-07-26 16:14:21] -rw-r--r-- 2 boincer umatlas    542899 Jul 26 13:53 input.tar.gz
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas 215240491 Jul 26 16:13 HITS.pool.root.1
[2025-07-26 16:14:21] -rw------- 1 boincer umatlas   1116160 Jul 26 16:14 result.tar.gz
16:14:23 (26038): run_atlas exited; CPU time 60058.874350
16:14:23 (26038): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN