Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
10:55:17 (2970050): wrapper (7.7.26015): starting
10:55:17 (2970050): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 10:55:17] Arguments: --nthreads 12
[2025-07-27 10:55:17] Threads: 12
[2025-07-27 10:55:17] Checking for CVMFS
[2025-07-27 10:55:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:55:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:55:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:55:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:55:20] 2.13.1.0 2970273 0 27736 148817 3 1 3723340 6144000 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-27 10:55:20] CVMFS is ok
[2025-07-27 10:55:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:55:20] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-27 10:55:20] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-27 10:55:20] Further information can be found at the LHC@home message board.
[2025-07-27 10:55:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:55:20] Checking for apptainer binary...
[2025-07-27 10:55:20] apptainer is not installed, using version from CVMFS
[2025-07-27 10:55:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:55:21] ace
[2025-07-27 10:55:21] apptainer works
[2025-07-27 10:55:21] Set ATHENA_PROC_NUMBER=12
[2025-07-27 10:55:21] Set ATHENA_CORE_NUMBER=12
[2025-07-27 10:55:21] Starting ATLAS job with PandaID=6745102959
[2025-07-27 10:55:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:17:54]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:17:54]  mtime=0
[2025-07-27 12:17:54]  protocol_id=None
[2025-07-27 12:17:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 12:17:54]  replicas=None
[2025-07-27 12:17:54]  scope=mc23_13p6TeV
[2025-07-27 12:17:54]  status=None
[2025-07-27 12:17:54]  status_code=0
[2025-07-27 12:17:54]  storage_token=
[2025-07-27 12:17:54]  surl=/var/lib/boinc-client/slots/16/PanDA_Pilot-6745102959/log.45743349._035702.job.log.tgz.1
[2025-07-27 12:17:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/52/log.45743349._035702.job.log.tgz.1
[2025-07-27 12:17:54]  workdir=None
[2025-07-27 12:17:54] ]
[2025-07-27 12:17:54] 2025-07-27 17:17:13,108 | INFO     | transferring file log.45743349._035702.job.log.tgz.1 from /var/lib/boinc-client/slots/16/PanDA_Pilot-6745102959/log.45743349._035702.job.log.tgz.1 to /var/lib/boin
[2025-07-27 12:17:54] 2025-07-27 17:17:13,108 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/16/PanDA_Pilot-6745102959/log.45743349._035702.job.log.tgz.1 /var/lib/boinc-client/slots/16/log.4574
[2025-07-27 12:17:54] 2025-07-27 17:17:13,123 | INFO     | adding to output.list: log.45743349._035702.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/52/log.45743349._035702.job.log.tg
[2025-07-27 12:17:54] 2025-07-27 17:17:13,123 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 12:17:54] 2025-07-27 17:17:13,123 | INFO     | summary of transferred files:
[2025-07-27 12:17:54] 2025-07-27 17:17:13,124 | INFO     |  -- lfn=log.45743349._035702.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 12:17:54] 2025-07-27 17:17:13,124 | INFO     | stage-out finished correctly
[2025-07-27 12:17:54] 2025-07-27 17:17:15,325 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 12:17:54] 2025-07-27 17:17:15,348 | INFO     | monitor loop #367: job 0:6745102959 is in state 'finished'
[2025-07-27 12:17:54] 2025-07-27 17:17:15,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:17:54] 2025-07-27 17:17:15,394 | INFO     | job 6745102959 has state=finished
[2025-07-27 12:17:54] 2025-07-27 17:17:15,394 | INFO     | preparing for final server update for job 6745102959 in state='finished'
[2025-07-27 12:17:54] 2025-07-27 17:17:15,395 | INFO     | this job has now completed (state=finished)
[2025-07-27 12:17:54] 2025-07-27 17:17:15,395 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 12:17:54] 2025-07-27 17:17:15,395 | INFO     | log transfer has been attempted: DONE
[2025-07-27 12:17:54] 2025-07-27 17:17:15,395 | INFO     | job 6745102959 has finished - writing final server update
[2025-07-27 12:17:54] 2025-07-27 17:17:15,396 | INFO     | total number of processed events: 400 (read)
[2025-07-27 12:17:54] 2025-07-27 17:17:15,397 | INFO     | executing command: lscpu
[2025-07-27 12:17:54] 2025-07-27 17:17:15,415 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 12:17:54] 2025-07-27 17:17:17,872 | INFO     | monitor loop #368: job 0:6745102959 is in state 'finished'
[2025-07-27 12:17:54] 2025-07-27 17:17:17,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:17:54] 2025-07-27 17:17:20,086 | INFO     | PID=2974362 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 12:17:54] 2025-07-27 17:17:20,376 | INFO     | monitor loop #369: job 0:6745102959 is in state 'finished'
[2025-07-27 12:17:54] 2025-07-27 17:17:20,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:17:54] 2025-07-27 17:17:22,880 | INFO     | monitor loop #370: job 0:6745102959 is in state 'finished'
[2025-07-27 12:17:54] 2025-07-27 17:17:22,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:17:54] 2025-07-27 17:17:22,904 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 12:17:54] 2025-07-27 17:17:22,906 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2904.0487499999995
[2025-07-27 12:17:54] 2025-07-27 17:17:22,908 | INFO     | using path: /var/lib/boinc-client/slots/16/PanDA_Pilot-6745102959/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:17:54] 2025-07-27 17:17:22,909 | INFO     | extracted standard info from prmon json
[2025-07-27 12:17:54] 2025-07-27 17:17:22,909 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:17:54] 2025-07-27 17:17:22,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:17:54] 2025-07-27 17:17:22,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:17:54] 2025-07-27 17:17:22,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:17:54] 2025-07-27 17:17:22,910 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | sum of deviations: -9280049925.999998
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | mean x: 1753634259.0
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | mean y: 2777313.5342465756
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | -- intersect: 134937535066.99893
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | intersect: 134937535066.99893
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | chi2: 0.11288642899351653
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | -- intersect: 134937535066.99893
[2025-07-27 12:17:54] 2025-07-27 17:17:22,911 | INFO     | current memory leak: -76.95 B/s (using 73 data points, chi2=0.11)
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | could have reported an average CPU frequency of 2588 MHz (6 samples)
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | ..............................
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | . Timing measurements:
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | . get job = 0 s
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | . initial setup = 3 s
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | . payload setup = 5 s
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | . stage-in = 0 s
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | . payload execution = 4874 s
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | . stage-out = 0 s
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | . log creation = 0 s
[2025-07-27 12:17:54] 2025-07-27 17:17:22,912 | INFO     | ..............................
[2025-07-27 12:17:54] 2025-07-27 17:17:22,964 | INFO     | 
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | job summary report
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | --------------------------------------------------
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | PanDA job id: 6745102959
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | task id: 45743349
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | errors: (none)
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | pilot state: finished 
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | transexitcode: 0
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | exeerrorcode: 0
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | exeerrordiag: 
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | exitcode: 0
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | exitmsg: OK
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | cpuconsumptiontime: 53989 s
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | nevents: 400
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | neventsw: 0
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | pid: 2980956
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | pgrp: 2980956
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | corecount: 12
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | event service: False
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | sizes: {0: 2397483, 3: 2397745, 11: 2397773, 4883: 2424185, 4884: 2433199, 4886: 2433255, 4893: 2433577}
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | --------------------------------------------------
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | 
[2025-07-27 12:17:54] 2025-07-27 17:17:22,965 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/16
[2025-07-27 12:17:54] 2025-07-27 17:17:22,978 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,980 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:17:54] 2025-07-27 17:17:22,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,980 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:17:54] 2025-07-27 17:17:22,980 | INFO     | job 6745102959 has completed (purged errors)
[2025-07-27 12:17:54] 2025-07-27 17:17:22,980 | INFO     | overall cleanup function is called
[2025-07-27 12:17:54] 2025-07-27 17:17:23,986 | INFO     | --- collectZombieJob: --- 10, [2980956]
[2025-07-27 12:17:54] 2025-07-27 17:17:23,987 | INFO     | zombie collector waiting for pid 2980956
[2025-07-27 12:17:54] 2025-07-27 17:17:23,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:17:54] 2025-07-27 17:17:23,987 | INFO     | collected zombie processes
[2025-07-27 12:17:54] 2025-07-27 17:17:23,987 | INFO     | will attempt to kill all subprocesses of pid=2980956
[2025-07-27 12:17:54] 2025-07-27 17:17:24,079 | INFO     | process IDs to be killed: [2980956] (in reverse order)
[2025-07-27 12:17:54] 2025-07-27 17:17:24,128 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:17:54] 2025-07-27 17:17:24,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:17:54] 2025-07-27 17:17:24,130 | INFO     | did not find any defunct processes belonging to 2980956
[2025-07-27 12:17:54] 2025-07-27 17:17:24,133 | INFO     | did not find any defunct processes belonging to 2980956
[2025-07-27 12:17:54] 2025-07-27 17:17:24,133 | INFO     | ready for new job
[2025-07-27 12:17:54] 2025-07-27 17:17:24,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:17:54] 2025-07-27 17:17:24,134 | INFO     | ***************************************
[2025-07-27 12:17:54] 2025-07-27 17:17:24,134 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:17:54] 2025-07-27 17:17:24,134 | INFO     | ***************************************
[2025-07-27 12:17:54] 2025-07-27 17:17:24,134 | INFO     | 
[2025-07-27 12:17:54] 2025-07-27 17:17:24,135 | INFO     | architecture information:
[2025-07-27 12:17:54] 2025-07-27 17:17:24,135 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:17:54] 2025-07-27 17:17:24,147 | INFO     | cat /etc/os-release:
[2025-07-27 12:17:54] NAME="CentOS Linux"
[2025-07-27 12:17:54] VERSION="7 (Core)"
[2025-07-27 12:17:54] ID="centos"
[2025-07-27 12:17:54] ID_LIKE="rhel fedora"
[2025-07-27 12:17:54] VERSION_ID="7"
[2025-07-27 12:17:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:17:54] ANSI_COLOR="0;31"
[2025-07-27 12:17:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:17:54] HOME_URL="https://www.centos.org/"
[2025-07-27 12:17:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:17:54] 
[2025-07-27 12:17:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:17:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:17:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:17:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:17:54] 
[2025-07-27 12:17:54] 2025-07-27 17:17:24,147 | INFO     | ***************************************
[2025-07-27 12:17:54] 2025-07-27 17:17:24,650 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/16
[2025-07-27 12:17:54] 2025-07-27 17:17:24,664 | INFO     | sufficient remaining disk space (22339911680 B)
[2025-07-27 12:17:54] 2025-07-27 17:17:24,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:17:54] 2025-07-27 17:17:24,664 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:17:54] 2025-07-27 17:17:24,664 | INFO     | update_server=False
[2025-07-27 12:17:54] 2025-07-27 17:17:24,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:17:54] 2025-07-27 17:17:24,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:17:54] 2025-07-27 17:17:24,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:17:54] 2025-07-27 17:17:24,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:17:54] 2025-07-27 17:17:24,665 | INFO     | aborting loop
[2025-07-27 12:17:54] 2025-07-27 17:17:24,681 | INFO     | all job control threads have been joined
[2025-07-27 12:17:54] 2025-07-27 17:17:24,891 | INFO     | all payload control threads have been joined
[2025-07-27 12:17:54] 2025-07-27 17:17:25,567 | INFO     | all data control threads have been joined
[2025-07-27 12:17:54] 2025-07-27 17:17:25,670 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:25,671 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:25,672 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:25,688 | INFO     | [job] control thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:25,834 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:25,838 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:25,897 | INFO     | [payload] control thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:25,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:17:54] 2025-07-27 17:17:25,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:26,127 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:26,138 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:26,571 | INFO     | [data] control thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:26,670 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:26,841 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:26,958 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:26,983 | INFO     | [job] validate thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:29,906 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:17:54] 2025-07-27 17:17:30,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673877079872)>', '<ExcThread(monitor, started 139673049483008)>']
[2025-07-27 12:17:54] 2025-07-27 17:17:35,438 | INFO     | all workflow threads have been joined
[2025-07-27 12:17:54] 2025-07-27 17:17:35,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:17:54] 2025-07-27 17:17:35,440 | INFO     | traces error code: 0
[2025-07-27 12:17:54] 2025-07-27 17:17:35,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:17:54] 2025-07-27 17:17:54,254 | INFO     | PID=2974362 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 12:17:54] 2025-07-27 17:17:54,255 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:17:54] 2025-07-27 17:17:54,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:17:54] 2025-07-27 17:17:54,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:17:54] 2025-07-27 17:17:54,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:17:54] 2025-07-27 17:17:54,255 | INFO     | [monitor] control thread has ended
[2025-07-27 12:17:54] 2025-07-27 17:17:54,391 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:17:54] 2025-07-27 17:17:54,393 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:17:54] 2025-07-27 17:17:54,395 [wrapper] pilotpid: 2974362
[2025-07-27 12:17:54] 2025-07-27 17:17:54,397 [wrapper] Pilot exit status: 0
[2025-07-27 12:17:54] 2025-07-27 17:17:54,405 [wrapper] pandaids: 6745102959
[2025-07-27 12:17:54] 2025-07-27 17:17:54,425 [wrapper] cleanup supervisor_pilot 2996022 2974363
[2025-07-27 12:17:54] 2025-07-27 17:17:54,427 [wrapper] Test setup, not cleaning
[2025-07-27 12:17:54] 2025-07-27 17:17:54,429 [wrapper] apfmon messages muted
[2025-07-27 12:17:54] 2025-07-27 17:17:54,431 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:17:54] 2025-07-27 17:17:54,432 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:17:54]  *** Error codes and diagnostics ***
[2025-07-27 12:17:54]     "exeErrorCode": 0,
[2025-07-27 12:17:54]     "exeErrorDiag": "",
[2025-07-27 12:17:54]     "pilotErrorCode": 0,
[2025-07-27 12:17:54]     "pilotErrorDiag": "",
[2025-07-27 12:17:54]  *** Listing of results directory ***
[2025-07-27 12:17:54] total 350820
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc    530466 Jul 26 04:28 pilot3.tar.gz
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc      5112 Jul 26 04:42 queuedata.json
[2025-07-27 12:17:54] -rwx------ 1 boinc boinc     36292 Jul 26 04:42 runpilot2-wrapper.sh
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc       100 Jul 27 10:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:17:54] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 10:55 run_atlas
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc       105 Jul 27 10:55 job.xml
[2025-07-27 12:17:54] -rw-r--r-- 2 boinc boinc 144596678 Jul 27 10:55 EVNT.45743347._002033.pool.root.1
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc      6789 Jul 27 10:55 init_data.xml
[2025-07-27 12:17:54] drwxrwx--x 2 boinc boinc      4096 Jul 27 10:55 shared
[2025-07-27 12:17:54] -rw-r--r-- 2 boinc boinc    542899 Jul 27 10:55 input.tar.gz
[2025-07-27 12:17:54] -rw-r--r-- 2 boinc boinc     15095 Jul 27 10:55 start_atlas.sh
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc         0 Jul 27 10:55 boinc_lockfile
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc      2563 Jul 27 10:55 pandaJob.out
[2025-07-27 12:17:54] -rw------- 1 boinc boinc    980101 Jul 27 10:55 agis_schedconf.cvmfs.json
[2025-07-27 12:17:54] -rw------- 1 boinc boinc   1593052 Jul 27 10:55 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:17:54] drwx------ 4 boinc boinc      4096 Jul 27 10:55 pilot3
[2025-07-27 12:17:54] -rw------- 1 boinc boinc 209086408 Jul 27 12:16 HITS.45743349._035702.pool.root.1
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc       529 Jul 27 12:16 boinc_task_state.xml
[2025-07-27 12:17:54] -rw------- 1 boinc boinc      1048 Jul 27 12:17 memory_monitor_summary.json
[2025-07-27 12:17:54] -rw------- 1 boinc boinc    366688 Jul 27 12:17 log.45743349._035702.job.log.tgz.1
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc      8192 Jul 27 12:17 boinc_mmap_file
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc        27 Jul 27 12:17 wrapper_checkpoint.txt
[2025-07-27 12:17:54] -rw------- 1 boinc boinc      7812 Jul 27 12:17 heartbeat.json
[2025-07-27 12:17:54] -rw------- 1 boinc boinc       747 Jul 27 12:17 pilotlog.txt
[2025-07-27 12:17:54] -rw------- 1 boinc boinc        95 Jul 27 12:17 pilot_heartbeat.json
[2025-07-27 12:17:54] -rw------- 1 boinc boinc    474426 Jul 27 12:17 log.45743349._035702.job.log.1
[2025-07-27 12:17:54] -rw------- 1 boinc boinc       357 Jul 27 12:17 output.list
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc       620 Jul 27 12:17 runtime_log
[2025-07-27 12:17:54] -rw------- 1 boinc boinc    860160 Jul 27 12:17 result.tar.gz
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc      8711 Jul 27 12:17 runtime_log.err
[2025-07-27 12:17:54] -rw------- 1 boinc boinc       646 Jul 27 12:17 RR5LDmobqz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEX0KDmRI13lm.diag
[2025-07-27 12:17:54] -rw-r--r-- 1 boinc boinc     21977 Jul 27 12:17 stderr.txt
[2025-07-27 12:17:54] HITS file was successfully produced:
[2025-07-27 12:17:54] -rw------- 1 boinc boinc 209086408 Jul 27 12:16 shared/HITS.pool.root.1
[2025-07-27 12:17:54]  *** Contents of shared directory: ***
[2025-07-27 12:17:54] total 346792
[2025-07-27 12:17:54] -rw-r--r-- 2 boinc boinc 144596678 Jul 27 10:55 ATLAS.root_0
[2025-07-27 12:17:54] -rw-r--r-- 2 boinc boinc    542899 Jul 27 10:55 input.tar.gz
[2025-07-27 12:17:54] -rw-r--r-- 2 boinc boinc     15095 Jul 27 10:55 start_atlas.sh
[2025-07-27 12:17:54] -rw------- 1 boinc boinc 209086408 Jul 27 12:16 HITS.pool.root.1
[2025-07-27 12:17:54] -rw------- 1 boinc boinc    860160 Jul 27 12:17 result.tar.gz
12:17:55 (2970050): run_atlas exited; CPU time 54015.258504
12:17:55 (2970050): called boinc_finish(0)

</stderr_txt>
]]>

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