Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:46:09 (23262): wrapper (7.7.26015): starting
13:46:09 (23262): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 13:46:09] Arguments: --nthreads 8
[2025-07-26 13:46:09] Threads: 8
[2025-07-26 13:46:09] Checking for CVMFS
[2025-07-26 13:46:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 13:46:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 13:46:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 13:46:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 13:46:09] 2.11.2.0 2692 98158 113408 148784 3 57 14724520 20275200 1 130560 0 25926898 99.954 7826594 9012 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 13:46:09] CVMFS is ok
[2025-07-26 13:46:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 13:46:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 13:46:09] Further information can be found at the LHC@home message board.
[2025-07-26 13:46:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 13:46:09] Checking for apptainer binary...
[2025-07-26 13:46:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 13:46:09] Running /usr/bin/apptainer --version
[2025-07-26 13:46:09] apptainer version 1.3.2-1.el7
[2025-07-26 13:46:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 13:46:11] c-204-1.aglt2.org
[2025-07-26 13:46:11] apptainer works
[2025-07-26 13:46:11] Set ATHENA_PROC_NUMBER=8
[2025-07-26 13:46:11] Set ATHENA_CORE_NUMBER=8
[2025-07-26 13:46:11] Starting ATLAS job with PandaID=6745185643
[2025-07-26 13:46:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:12:38]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:12:38] 2025-07-26 20:12:00,647 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 16:12:38] 2025-07-26 20:12:02,975 | INFO     | monitor loop #653: job 0:6745185643 is in state 'finished'
[2025-07-26 16:12:38] 2025-07-26 20:12:02,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:12:38] 2025-07-26 20:12:05,478 | INFO     | monitor loop #654: job 0:6745185643 is in state 'finished'
[2025-07-26 16:12:38] 2025-07-26 20:12:05,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,557 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 16:12:38] 2025-07-26 20:12:06,560 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-26 16:12:38] 2025-07-26 20:12:06,562 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745185643/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,563 | INFO     | extracted standard info from prmon json
[2025-07-26 16:12:38] 2025-07-26 20:12:06,563 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 16:12:38] 2025-07-26 20:12:06,563 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 16:12:38] 2025-07-26 20:12:06,564 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:12:38] 2025-07-26 20:12:06,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:12:38] 2025-07-26 20:12:06,568 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:12:38] 2025-07-26 20:12:06,568 | INFO     | sum of square deviations: 906703512.0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,569 | INFO     | sum of deviations: 10853417253.0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,569 | INFO     | mean x: 1753556351.0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,569 | INFO     | mean y: 2492852.4125874126
[2025-07-26 16:12:38] 2025-07-26 20:12:06,569 | INFO     | -- intersect: -20987917466.028008
[2025-07-26 16:12:38] 2025-07-26 20:12:06,569 | INFO     | intersect: -20987917466.028008
[2025-07-26 16:12:38] 2025-07-26 20:12:06,570 | INFO     | chi2: 1.472258924399857
[2025-07-26 16:12:38] 2025-07-26 20:12:06,570 | INFO     | sum of square deviations: 814878534.5
[2025-07-26 16:12:38] 2025-07-26 20:12:06,571 | INFO     | sum of deviations: 10424285120.0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,571 | INFO     | mean x: 1753556198.5
[2025-07-26 16:12:38] 2025-07-26 20:12:06,571 | INFO     | mean y: 2492139.565217391
[2025-07-26 16:12:38] 2025-07-26 20:12:06,571 | INFO     | -- intersect: -22429771091.32655
[2025-07-26 16:12:38] 2025-07-26 20:12:06,571 | INFO     | intersect: -22429771091.32655
[2025-07-26 16:12:38] 2025-07-26 20:12:06,572 | INFO     | chi2: 1.473994395422196
[2025-07-26 16:12:38] 2025-07-26 20:12:06,572 | INFO     | current chi2=1.473994395422196 (change=-0.11787811189844814 %)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,572 | INFO     | right removable region: 137
[2025-07-26 16:12:38] 2025-07-26 20:12:06,572 | INFO     | sum of square deviations: 814878534.5
[2025-07-26 16:12:38] 2025-07-26 20:12:06,573 | INFO     | sum of deviations: -9444226301.999994
[2025-07-26 16:12:38] 2025-07-26 20:12:06,573 | INFO     | mean x: 1753556503.5
[2025-07-26 16:12:38] 2025-07-26 20:12:06,573 | INFO     | mean y: 2525992.0144927534
[2025-07-26 16:12:38] 2025-07-26 20:12:06,573 | INFO     | -- intersect: 20325781239.57046
[2025-07-26 16:12:38] 2025-07-26 20:12:06,573 | INFO     | intersect: 20325781239.57046
[2025-07-26 16:12:38] 2025-07-26 20:12:06,574 | INFO     | chi2: 0.09734651050344392
[2025-07-26 16:12:38] 2025-07-26 20:12:06,574 | INFO     | current chi2=0.09734651050344392 (change=93.3879490292018 %)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,574 | INFO     | sum of square deviations: 729472282.0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,575 | INFO     | sum of deviations: -6604257475.999999
[2025-07-26 16:12:38] 2025-07-26 20:12:06,575 | INFO     | mean x: 1753556656.0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,575 | INFO     | mean y: 2520843.6015037596
[2025-07-26 16:12:38] 2025-07-26 20:12:06,575 | INFO     | -- intersect: 15878298362.146833
[2025-07-26 16:12:38] 2025-07-26 20:12:06,575 | INFO     | intersect: 15878298362.146833
[2025-07-26 16:12:38] 2025-07-26 20:12:06,576 | INFO     | chi2: 0.07925760868794594
[2025-07-26 16:12:38] 2025-07-26 20:12:06,576 | INFO     | current chi2=0.07925760868794594 (change=18.581972504148496 %)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,576 | INFO     | left removable region: 20
[2025-07-26 16:12:38] 2025-07-26 20:12:06,576 | INFO     | sum of square deviations: 496597218.0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,577 | INFO     | sum of deviations: 1895412740.0000002
[2025-07-26 16:12:38] 2025-07-26 20:12:06,577 | INFO     | mean x: 1753556778.0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,577 | INFO     | mean y: 2503113.9743589745
[2025-07-26 16:12:38] 2025-07-26 20:12:06,577 | INFO     | -- intersect: -6690474085.375462
[2025-07-26 16:12:38] 2025-07-26 20:12:06,578 | INFO     | intersect: -6690474085.375462
[2025-07-26 16:12:38] 2025-07-26 20:12:06,578 | INFO     | chi2: 0.000498646161131559
[2025-07-26 16:12:38] 2025-07-26 20:12:06,578 | INFO     | -- intersect: -6690474085.375462
[2025-07-26 16:12:38] 2025-07-26 20:12:06,578 | INFO     | current memory leak: 3.82 B/s (using 117 data points, chi2=0.00)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,578 | INFO     | could have reported an average CPU frequency of 1993 MHz (8 samples)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,579 | INFO     | ..............................
[2025-07-26 16:12:38] 2025-07-26 20:12:06,579 | INFO     | . Timing measurements:
[2025-07-26 16:12:38] 2025-07-26 20:12:06,579 | INFO     | . get job = 0 s
[2025-07-26 16:12:38] 2025-07-26 20:12:06,579 | INFO     | . initial setup = 2 s
[2025-07-26 16:12:38] 2025-07-26 20:12:06,579 | INFO     | . payload setup = 11 s
[2025-07-26 16:12:38] 2025-07-26 20:12:06,579 | INFO     | . stage-in = 0 s
[2025-07-26 16:12:38] 2025-07-26 20:12:06,579 | INFO     | . payload execution = 8699 s
[2025-07-26 16:12:38] 2025-07-26 20:12:06,579 | INFO     | . stage-out = 0 s
[2025-07-26 16:12:38] 2025-07-26 20:12:06,580 | INFO     | . log creation = 0 s
[2025-07-26 16:12:38] 2025-07-26 20:12:06,580 | INFO     | ..............................
[2025-07-26 16:12:38] 2025-07-26 20:12:06,674 | INFO     | 
[2025-07-26 16:12:38] 2025-07-26 20:12:06,674 | INFO     | job summary report
[2025-07-26 16:12:38] 2025-07-26 20:12:06,674 | INFO     | --------------------------------------------------
[2025-07-26 16:12:38] 2025-07-26 20:12:06,675 | INFO     | PanDA job id: 6745185643
[2025-07-26 16:12:38] 2025-07-26 20:12:06,675 | INFO     | task id: 45743349
[2025-07-26 16:12:38] 2025-07-26 20:12:06,675 | INFO     | errors: (none)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,675 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:12:38] 2025-07-26 20:12:06,675 | INFO     | pilot state: finished 
[2025-07-26 16:12:38] 2025-07-26 20:12:06,675 | INFO     | transexitcode: 0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,676 | INFO     | exeerrorcode: 0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,676 | INFO     | exeerrordiag: 
[2025-07-26 16:12:38] 2025-07-26 20:12:06,676 | INFO     | exitcode: 0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,676 | INFO     | exitmsg: OK
[2025-07-26 16:12:38] 2025-07-26 20:12:06,676 | INFO     | cpuconsumptiontime: 65074 s
[2025-07-26 16:12:38] 2025-07-26 20:12:06,677 | INFO     | nevents: 400
[2025-07-26 16:12:38] 2025-07-26 20:12:06,677 | INFO     | neventsw: 0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,677 | INFO     | pid: 1922
[2025-07-26 16:12:38] 2025-07-26 20:12:06,677 | INFO     | pgrp: 1922
[2025-07-26 16:12:38] 2025-07-26 20:12:06,677 | INFO     | corecount: 8
[2025-07-26 16:12:38] 2025-07-26 20:12:06,677 | INFO     | event service: False
[2025-07-26 16:12:38] 2025-07-26 20:12:06,678 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 8715: 2425758, 8717: 2434812, 8724: 2435138}
[2025-07-26 16:12:38] 2025-07-26 20:12:06,678 | INFO     | --------------------------------------------------
[2025-07-26 16:12:38] 2025-07-26 20:12:06,678 | INFO     | 
[2025-07-26 16:12:38] 2025-07-26 20:12:06,678 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 16:12:38] 2025-07-26 20:12:06,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,706 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,706 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,706 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:12:38] 2025-07-26 20:12:06,710 | INFO     | job 6745185643 has completed (purged errors)
[2025-07-26 16:12:38] 2025-07-26 20:12:06,710 | INFO     | overall cleanup function is called
[2025-07-26 16:12:38] 2025-07-26 20:12:07,718 | INFO     | --- collectZombieJob: --- 10, [1922]
[2025-07-26 16:12:38] 2025-07-26 20:12:07,719 | INFO     | zombie collector waiting for pid 1922
[2025-07-26 16:12:38] 2025-07-26 20:12:07,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:12:38] 2025-07-26 20:12:07,719 | INFO     | collected zombie processes
[2025-07-26 16:12:38] 2025-07-26 20:12:07,719 | INFO     | will attempt to kill all subprocesses of pid=1922
[2025-07-26 16:12:38] 2025-07-26 20:12:07,793 | INFO     | process IDs to be killed: [1922] (in reverse order)
[2025-07-26 16:12:38] 2025-07-26 20:12:07,858 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:12:38] 2025-07-26 20:12:07,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:12:38] 2025-07-26 20:12:07,863 | INFO     | did not find any defunct processes belonging to 1922
[2025-07-26 16:12:38] 2025-07-26 20:12:07,866 | INFO     | did not find any defunct processes belonging to 1922
[2025-07-26 16:12:38] 2025-07-26 20:12:07,867 | INFO     | ready for new job
[2025-07-26 16:12:38] 2025-07-26 20:12:07,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:12:38] 2025-07-26 20:12:07,870 | INFO     | ***************************************
[2025-07-26 16:12:38] 2025-07-26 20:12:07,871 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:12:38] 2025-07-26 20:12:07,871 | INFO     | ***************************************
[2025-07-26 16:12:38] 2025-07-26 20:12:07,871 | INFO     | 
[2025-07-26 16:12:38] 2025-07-26 20:12:07,872 | INFO     | architecture information:
[2025-07-26 16:12:38] 2025-07-26 20:12:07,873 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:12:38] 2025-07-26 20:12:07,890 | INFO     | cat /etc/os-release:
[2025-07-26 16:12:38] NAME="CentOS Linux"
[2025-07-26 16:12:38] VERSION="7 (Core)"
[2025-07-26 16:12:38] ID="centos"
[2025-07-26 16:12:38] ID_LIKE="rhel fedora"
[2025-07-26 16:12:38] VERSION_ID="7"
[2025-07-26 16:12:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:12:38] ANSI_COLOR="0;31"
[2025-07-26 16:12:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:12:38] HOME_URL="https://www.centos.org/"
[2025-07-26 16:12:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:12:38] 
[2025-07-26 16:12:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:12:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:12:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:12:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:12:38] 
[2025-07-26 16:12:38] 2025-07-26 20:12:07,891 | INFO     | ***************************************
[2025-07-26 16:12:38] 2025-07-26 20:12:08,393 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 16:12:38] 2025-07-26 20:12:08,413 | INFO     | sufficient remaining disk space (18742247424 B)
[2025-07-26 16:12:38] 2025-07-26 20:12:08,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:12:38] 2025-07-26 20:12:08,414 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:12:38] 2025-07-26 20:12:08,414 | INFO     | update_server=False
[2025-07-26 16:12:38] 2025-07-26 20:12:08,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:12:38] 2025-07-26 20:12:08,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:12:38] 2025-07-26 20:12:08,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:12:38] 2025-07-26 20:12:08,975 | INFO     | all data control threads have been joined
[2025-07-26 16:12:38] 2025-07-26 20:12:08,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:12:38] 2025-07-26 20:12:08,987 | INFO     | aborting loop
[2025-07-26 16:12:38] 2025-07-26 20:12:09,259 | INFO     | all payload control threads have been joined
[2025-07-26 16:12:38] 2025-07-26 20:12:09,420 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:09,420 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:09,589 | INFO     | all job control threads have been joined
[2025-07-26 16:12:38] 2025-07-26 20:12:09,777 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:09,790 | INFO     | [job] validate thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:09,981 | INFO     | [data] control thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:09,991 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,004 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,218 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,265 | INFO     | [payload] control thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,422 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,506 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,560 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,591 | INFO     | [job] control thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:10,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:12:38] 2025-07-26 20:12:10,823 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:14,795 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:12:38] 2025-07-26 20:12:15,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884439713600)>', '<ExcThread(monitor, started 139883259623168)>']
[2025-07-26 16:12:38] 2025-07-26 20:12:20,119 | INFO     | all workflow threads have been joined
[2025-07-26 16:12:38] 2025-07-26 20:12:20,120 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:12:38] 2025-07-26 20:12:20,126 | INFO     | traces error code: 0
[2025-07-26 16:12:38] 2025-07-26 20:12:20,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:12:38] 2025-07-26 20:12:38,476 | INFO     | PID=26924 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 16:12:38] 2025-07-26 20:12:38,477 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:12:38] 2025-07-26 20:12:38,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:12:38] 2025-07-26 20:12:38,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:12:38] 2025-07-26 20:12:38,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:12:38] 2025-07-26 20:12:38,478 | INFO     | [monitor] control thread has ended
[2025-07-26 16:12:38] 2025-07-26 20:12:38,609 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:12:38] 2025-07-26 20:12:38,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:12:38] 2025-07-26 20:12:38,618 [wrapper] pilotpid: 26924
[2025-07-26 16:12:38] 2025-07-26 20:12:38,622 [wrapper] Pilot exit status: 0
[2025-07-26 16:12:38] 2025-07-26 20:12:38,641 [wrapper] pandaids: 6745185643
[2025-07-26 16:12:38] 2025-07-26 20:12:38,685 [wrapper] cleanup supervisor_pilot  6238 26925
[2025-07-26 16:12:38] 2025-07-26 20:12:38,690 [wrapper] Test setup, not cleaning
[2025-07-26 16:12:38] 2025-07-26 20:12:38,694 [wrapper] apfmon messages muted
[2025-07-26 16:12:38] 2025-07-26 20:12:38,699 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:12:38] 2025-07-26 20:12:38,704 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:12:38]  *** Error codes and diagnostics ***
[2025-07-26 16:12:38]     "exeErrorCode": 0,
[2025-07-26 16:12:38]     "exeErrorDiag": "",
[2025-07-26 16:12:38]     "pilotErrorCode": 0,
[2025-07-26 16:12:38]     "pilotErrorDiag": "",
[2025-07-26 16:12:38]  *** Listing of results directory ***
[2025-07-26 16:12:38] total 353084
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer    530466 Jul 26 08:13 pilot3.tar.gz
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer      5112 Jul 26 08:19 queuedata.json
[2025-07-26 16:12:38] -rwx------ 1 boincer boincer     36292 Jul 26 08:19 runpilot2-wrapper.sh
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer       100 Jul 26 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:12:38] -rwxr-xr-x 1 boincer boincer      7986 Jul 26 13:46 run_atlas
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer       105 Jul 26 13:46 job.xml
[2025-07-26 16:12:38] -rw-r--r-- 2 boincer boincer 146252864 Jul 26 13:46 EVNT.45743347._002148.pool.root.1
[2025-07-26 16:12:38] -rw-r--r-- 2 boincer boincer     15095 Jul 26 13:46 start_atlas.sh
[2025-07-26 16:12:38] drwxrwx--x 2 boincer boincer      4096 Jul 26 13:46 shared
[2025-07-26 16:12:38] -rw-r--r-- 2 boincer boincer    542890 Jul 26 13:46 input.tar.gz
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer         0 Jul 26 13:46 boinc_lockfile
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer      2563 Jul 26 13:46 pandaJob.out
[2025-07-26 16:12:38] -rw------- 1 boincer boincer    980125 Jul 26 13:46 agis_schedconf.cvmfs.json
[2025-07-26 16:12:38] -rw------- 1 boincer boincer   1593052 Jul 26 13:46 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:12:38] drwx------ 4 boincer boincer      4096 Jul 26 13:46 pilot3
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer      5824 Jul 26 16:10 init_data.xml
[2025-07-26 16:12:38] -rw------- 1 boincer boincer 209134021 Jul 26 16:11 HITS.45743349._037588.pool.root.1
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer       529 Jul 26 16:11 boinc_task_state.xml
[2025-07-26 16:12:38] -rw------- 1 boincer boincer      1060 Jul 26 16:11 memory_monitor_summary.json
[2025-07-26 16:12:38] -rw------- 1 boincer boincer    345891 Jul 26 16:11 log.45743349._037588.job.log.tgz.1
[2025-07-26 16:12:38] -rw------- 1 boincer boincer      7839 Jul 26 16:12 heartbeat.json
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer      8192 Jul 26 16:12 boinc_mmap_file
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer        27 Jul 26 16:12 wrapper_checkpoint.txt
[2025-07-26 16:12:38] -rw------- 1 boincer boincer        95 Jul 26 16:12 pilot_heartbeat.json
[2025-07-26 16:12:38] -rw------- 1 boincer boincer       745 Jul 26 16:12 pilotlog.txt
[2025-07-26 16:12:38] -rw------- 1 boincer boincer    799103 Jul 26 16:12 log.45743349._037588.job.log.1
[2025-07-26 16:12:38] -rw------- 1 boincer boincer       357 Jul 26 16:12 output.list
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer       620 Jul 26 16:12 runtime_log
[2025-07-26 16:12:38] -rw------- 1 boincer boincer   1167360 Jul 26 16:12 result.tar.gz
[2025-07-26 16:12:38] -rw------- 1 boincer boincer       659 Jul 26 16:12 VJzKDmb3sz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2i0KDmlZM5mm.diag
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer      8655 Jul 26 16:12 runtime_log.err
[2025-07-26 16:12:38] -rw-r--r-- 1 boincer boincer     21220 Jul 26 16:12 stderr.txt
[2025-07-26 16:12:38] HITS file was successfully produced:
[2025-07-26 16:12:38] -rw------- 1 boincer boincer 209134021 Jul 26 16:11 shared/HITS.pool.root.1
[2025-07-26 16:12:38]  *** Contents of shared directory: ***
[2025-07-26 16:12:38] total 348756
[2025-07-26 16:12:38] -rw-r--r-- 2 boincer boincer 146252864 Jul 26 13:46 ATLAS.root_0
[2025-07-26 16:12:38] -rw-r--r-- 2 boincer boincer     15095 Jul 26 13:46 start_atlas.sh
[2025-07-26 16:12:38] -rw-r--r-- 2 boincer boincer    542890 Jul 26 13:46 input.tar.gz
[2025-07-26 16:12:38] -rw------- 1 boincer boincer 209134021 Jul 26 16:11 HITS.pool.root.1
[2025-07-26 16:12:38] -rw------- 1 boincer boincer   1167360 Jul 26 16:12 result.tar.gz
16:12:40 (23262): run_atlas exited; CPU time 64986.142357
16:12:40 (23262): called boinc_finish(0)

</stderr_txt>
]]>

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