Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:56:12 (252606): wrapper (7.7.26015): starting
13:56:12 (252606): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 13:56:12] Arguments: --nthreads 8
[2025-07-26 13:56:12] Threads: 8
[2025-07-26 13:56:12] Checking for CVMFS
[2025-07-26 13:56:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 13:56:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 13:56:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 13:56:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 13:56:12] 2.13.1.0 4026694 7062 98648 148784 2 188 20969632 40960001 12923 16776704 0 96833654 99.999 256546 59207 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 13:56:12] CVMFS is ok
[2025-07-26 13:56:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 13:56:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 13:56:12] Further information can be found at the LHC@home message board.
[2025-07-26 13:56:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 13:56:12] Checking for apptainer binary...
[2025-07-26 13:56:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 13:56:12] Running /usr/bin/apptainer --version
[2025-07-26 13:56:12] apptainer version 1.4.1-1.el9
[2025-07-26 13:56:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 13:56:13] c-208-38.aglt2.org
[2025-07-26 13:56:13] apptainer works
[2025-07-26 13:56:13] Set ATHENA_PROC_NUMBER=8
[2025-07-26 13:56:13] Set ATHENA_CORE_NUMBER=8
[2025-07-26 13:56:13] Starting ATLAS job with PandaID=6745185676
[2025-07-26 13:56:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 14:51:08]  *** The last 200 lines of the pilot log: ***
[2025-07-26 14:51:08]  is_tar=False
[2025-07-26 14:51:08]  lfn=log.45743349._037621.job.log.tgz.1
[2025-07-26 14:51:08]  mtime=0
[2025-07-26 14:51:08]  protocol_id=None
[2025-07-26 14:51:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 14:51:08]  replicas=None
[2025-07-26 14:51:08]  scope=mc23_13p6TeV
[2025-07-26 14:51:08]  status=None
[2025-07-26 14:51:08]  status_code=0
[2025-07-26 14:51:08]  storage_token=
[2025-07-26 14:51:08]  surl=/tmp/boinchome/slots/13/PanDA_Pilot-6745185676/log.45743349._037621.job.log.tgz.1
[2025-07-26 14:51:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/43/log.45743349._037621.job.log.tgz.1
[2025-07-26 14:51:08]  workdir=None
[2025-07-26 14:51:08] ]
[2025-07-26 14:51:08] 2025-07-26 18:50:29,598 | INFO     | transferring file log.45743349._037621.job.log.tgz.1 from /tmp/boinchome/slots/13/PanDA_Pilot-6745185676/log.45743349._037621.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 14:51:08] 2025-07-26 18:50:29,598 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/13/PanDA_Pilot-6745185676/log.45743349._037621.job.log.tgz.1 /tmp/boinchome/slots/13/log.45743349._037621.j
[2025-07-26 14:51:08] 2025-07-26 18:50:29,619 | INFO     | adding to output.list: log.45743349._037621.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/43/log.45743349._037621.job.log.tg
[2025-07-26 14:51:08] 2025-07-26 18:50:29,620 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 14:51:08] 2025-07-26 18:50:29,620 | INFO     | summary of transferred files:
[2025-07-26 14:51:08] 2025-07-26 18:50:29,620 | INFO     |  -- lfn=log.45743349._037621.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 14:51:08] 2025-07-26 18:50:29,620 | INFO     | stage-out finished correctly
[2025-07-26 14:51:08] 2025-07-26 18:50:31,041 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 14:51:08] 2025-07-26 18:50:32,882 | INFO     | job 6745185676 has state=finished
[2025-07-26 14:51:08] 2025-07-26 18:50:32,882 | INFO     | preparing for final server update for job 6745185676 in state='finished'
[2025-07-26 14:51:08] 2025-07-26 18:50:32,883 | INFO     | this job has now completed (state=finished)
[2025-07-26 14:51:08] 2025-07-26 18:50:32,883 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 14:51:08] 2025-07-26 18:50:32,883 | INFO     | log transfer has been attempted: DONE
[2025-07-26 14:51:08] 2025-07-26 18:50:32,883 | INFO     | job 6745185676 has finished - writing final server update
[2025-07-26 14:51:08] 2025-07-26 18:50:32,883 | INFO     | total number of processed events: 400 (read)
[2025-07-26 14:51:08] 2025-07-26 18:50:32,884 | INFO     | executing command: lscpu
[2025-07-26 14:51:08] 2025-07-26 18:50:32,940 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 14:51:08] 2025-07-26 18:50:33,658 | WARNING  | process 262762 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 14:51:08] 2025-07-26 18:50:33,659 | INFO     | using path: /tmp/boinchome/slots/13/PanDA_Pilot-6745185676/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 14:51:08] 2025-07-26 18:50:34,006 | INFO     | number of running child processes to parent process 262762: 1
[2025-07-26 14:51:08] 2025-07-26 18:50:34,006 | INFO     | maximum number of monitored processes: 6
[2025-07-26 14:51:08] 2025-07-26 18:50:36,365 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 14:51:08] 2025-07-26 18:50:36,370 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3761.1042343750005
[2025-07-26 14:51:08] 2025-07-26 18:50:36,383 | INFO     | using path: /tmp/boinchome/slots/13/PanDA_Pilot-6745185676/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 14:51:08] 2025-07-26 18:50:36,384 | INFO     | extracted standard info from prmon json
[2025-07-26 14:51:08] 2025-07-26 18:50:36,384 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 14:51:08] 2025-07-26 18:50:36,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 14:51:08] 2025-07-26 18:50:36,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 14:51:08] 2025-07-26 18:50:36,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 14:51:08] 2025-07-26 18:50:36,385 | INFO     | fitting pss+swap vs Time
[2025-07-26 14:51:08] 2025-07-26 18:50:36,385 | INFO     | sum of square deviations: 30168007.5
[2025-07-26 14:51:08] 2025-07-26 18:50:36,385 | INFO     | sum of deviations: 121966511.0
[2025-07-26 14:51:08] 2025-07-26 18:50:36,385 | INFO     | mean x: 1753554284.5
[2025-07-26 14:51:08] 2025-07-26 18:50:36,385 | INFO     | mean y: 2518287.086956522
[2025-07-26 14:51:08] 2025-07-26 18:50:36,385 | INFO     | -- intersect: -7086942225.993544
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | intersect: -7086942225.993544
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | chi2: 0.0003537763186926301
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | -- intersect: -7086942225.993544
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | current memory leak: 4.04 B/s (using 46 data points, chi2=0.00)
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | could have reported an average CPU frequency of 3763 MHz (5 samples)
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | ..............................
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | . Timing measurements:
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | . get job = 0 s
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | . initial setup = 2 s
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | . payload setup = 5 s
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | . stage-in = 0 s
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | . payload execution = 3222 s
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | . stage-out = 0 s
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | . log creation = 0 s
[2025-07-26 14:51:08] 2025-07-26 18:50:36,386 | INFO     | ..............................
[2025-07-26 14:51:08] 2025-07-26 18:50:36,719 | INFO     | 
[2025-07-26 14:51:08] 2025-07-26 18:50:36,719 | INFO     | job summary report
[2025-07-26 14:51:08] 2025-07-26 18:50:36,719 | INFO     | --------------------------------------------------
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | PanDA job id: 6745185676
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | task id: 45743349
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | errors: (none)
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | pilot state: finished 
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | transexitcode: 0
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | exeerrorcode: 0
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | exeerrordiag: 
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | exitcode: 0
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | exitmsg: OK
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | cpuconsumptiontime: 23707 s
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | nevents: 400
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | neventsw: 0
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | pid: 262762
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | pgrp: 262762
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | corecount: 8
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | event service: False
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | sizes: {0: 2397303, 1: 2397502, 4: 2397764, 11: 2397792, 3231: 2423316, 3232: 2423315, 3233: 2432499, 3234: 2432555, 3240: 2432781}
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | --------------------------------------------------
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | 
[2025-07-26 14:51:08] 2025-07-26 18:50:36,720 | INFO     | executing command: ls -lF /tmp/boinchome/slots/13
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | job 6745185676 has completed (purged errors)
[2025-07-26 14:51:08] 2025-07-26 18:50:36,739 | INFO     | overall cleanup function is called
[2025-07-26 14:51:08] 2025-07-26 18:50:37,747 | INFO     | --- collectZombieJob: --- 10, [262762]
[2025-07-26 14:51:08] 2025-07-26 18:50:37,747 | INFO     | zombie collector waiting for pid 262762
[2025-07-26 14:51:08] 2025-07-26 18:50:37,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 14:51:08] 2025-07-26 18:50:37,747 | INFO     | collected zombie processes
[2025-07-26 14:51:08] 2025-07-26 18:50:37,747 | INFO     | will attempt to kill all subprocesses of pid=262762
[2025-07-26 14:51:08] 2025-07-26 18:50:38,092 | INFO     | process IDs to be killed: [262762] (in reverse order)
[2025-07-26 14:51:08] 2025-07-26 18:50:38,213 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 14:51:08] 2025-07-26 18:50:38,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 14:51:08] 2025-07-26 18:50:38,228 | INFO     | did not find any defunct processes belonging to 262762
[2025-07-26 14:51:08] 2025-07-26 18:50:38,239 | INFO     | did not find any defunct processes belonging to 262762
[2025-07-26 14:51:08] 2025-07-26 18:50:38,240 | INFO     | ready for new job
[2025-07-26 14:51:08] 2025-07-26 18:50:38,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 14:51:08] 2025-07-26 18:50:38,241 | INFO     | ***************************************
[2025-07-26 14:51:08] 2025-07-26 18:50:38,242 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 14:51:08] 2025-07-26 18:50:38,242 | INFO     | ***************************************
[2025-07-26 14:51:08] 2025-07-26 18:50:38,242 | INFO     | 
[2025-07-26 14:51:08] 2025-07-26 18:50:38,247 | INFO     | architecture information:
[2025-07-26 14:51:08] 2025-07-26 18:50:38,247 | INFO     | executing command: cat /etc/os-release
[2025-07-26 14:51:08] 2025-07-26 18:50:38,262 | INFO     | cat /etc/os-release:
[2025-07-26 14:51:08] NAME="CentOS Linux"
[2025-07-26 14:51:08] VERSION="7 (Core)"
[2025-07-26 14:51:08] ID="centos"
[2025-07-26 14:51:08] ID_LIKE="rhel fedora"
[2025-07-26 14:51:08] VERSION_ID="7"
[2025-07-26 14:51:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 14:51:08] ANSI_COLOR="0;31"
[2025-07-26 14:51:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 14:51:08] HOME_URL="https://www.centos.org/"
[2025-07-26 14:51:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 14:51:08] 
[2025-07-26 14:51:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 14:51:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 14:51:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 14:51:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 14:51:08] 
[2025-07-26 14:51:08] 2025-07-26 18:50:38,263 | INFO     | ***************************************
[2025-07-26 14:51:08] 2025-07-26 18:50:38,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/13
[2025-07-26 14:51:08] 2025-07-26 18:50:38,782 | INFO     | sufficient remaining disk space (166467731456 B)
[2025-07-26 14:51:08] 2025-07-26 18:50:38,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 14:51:08] 2025-07-26 18:50:38,783 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 14:51:08] 2025-07-26 18:50:38,783 | INFO     | update_server=False
[2025-07-26 14:51:08] 2025-07-26 18:50:38,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 14:51:08] 2025-07-26 18:50:39,012 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 14:51:08] 2025-07-26 18:50:39,012 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 14:51:08] 2025-07-26 18:50:39,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:51:08] 2025-07-26 18:50:39,013 | INFO     | will abort loop
[2025-07-26 14:51:08] 2025-07-26 18:50:39,039 | INFO     | all job control threads have been joined
[2025-07-26 14:51:08] 2025-07-26 18:50:39,321 | INFO     | all payload control threads have been joined
[2025-07-26 14:51:08] 2025-07-26 18:50:39,769 | INFO     | all data control threads have been joined
[2025-07-26 14:51:08] 2025-07-26 18:50:39,788 | INFO     | [job] retrieve thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,018 | INFO     | [job] job monitor thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,045 | INFO     | [job] control thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,131 | INFO     | [payload] failed_post thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 14:51:08] 2025-07-26 18:50:40,327 | INFO     | [payload] control thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,716 | INFO     | [job] validate thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,774 | INFO     | [data] control thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,789 | INFO     | [payload] validate_post thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:40,959 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:41,025 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:41,184 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:41,258 | INFO     | [data] copytool_in thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:41,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:51:08] 2025-07-26 18:50:41,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 14:51:08] 2025-07-26 18:50:42,199 | INFO     | [data] copytool_out thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:42,459 | INFO     | [job] queue monitor thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:45,609 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 14:51:08] 2025-07-26 18:50:47,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426214389568)>', '<ExcThread(monitor, started 140425314670336)>']
[2025-07-26 14:51:08] 2025-07-26 18:50:52,604 | INFO     | all workflow threads have been joined
[2025-07-26 14:51:08] 2025-07-26 18:50:52,604 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 14:51:08] 2025-07-26 18:50:52,604 | INFO     | traces error code: 0
[2025-07-26 14:51:08] 2025-07-26 18:50:52,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 14:51:08] 2025-07-26 18:51:08,452 | INFO     | PID=256203 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 14:51:08] 2025-07-26 18:51:08,453 | INFO     | .. there are 16 such processes running
[2025-07-26 14:51:08] 2025-07-26 18:51:08,453 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 14:51:08] 2025-07-26 18:51:08,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 14:51:08] 2025-07-26 18:51:08,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 14:51:08] 2025-07-26 18:51:08,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 14:51:08] 2025-07-26 18:51:08,453 | INFO     | [monitor] control thread has ended
[2025-07-26 14:51:08] 2025-07-26 18:51:08,562 [wrapper] ==== pilot stdout END ====
[2025-07-26 14:51:08] 2025-07-26 18:51:08,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 14:51:08] 2025-07-26 18:51:08,566 [wrapper] pilotpid: 256203
[2025-07-26 14:51:08] 2025-07-26 18:51:08,567 [wrapper] Pilot exit status: 0
[2025-07-26 14:51:08] 2025-07-26 18:51:08,575 [wrapper] pandaids: 6745185676
[2025-07-26 14:51:08] 2025-07-26 18:51:08,656 [wrapper] cleanup supervisor_pilot  546668 256204
[2025-07-26 14:51:08] 2025-07-26 18:51:08,659 [wrapper] Test setup, not cleaning
[2025-07-26 14:51:08] 2025-07-26 18:51:08,661 [wrapper] apfmon messages muted
[2025-07-26 14:51:08] 2025-07-26 18:51:08,664 [wrapper] ==== wrapper stdout END ====
[2025-07-26 14:51:08] 2025-07-26 18:51:08,667 [wrapper] ==== wrapper stderr END ====
[2025-07-26 14:51:08]  *** Error codes and diagnostics ***
[2025-07-26 14:51:08]     "exeErrorCode": 0,
[2025-07-26 14:51:08]     "exeErrorDiag": "",
[2025-07-26 14:51:08]     "pilotErrorCode": 0,
[2025-07-26 14:51:08]     "pilotErrorDiag": "",
[2025-07-26 14:51:08]  *** Listing of results directory ***
[2025-07-26 14:51:08] total 347788
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 08:13 pilot3.tar.gz
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 08:19 queuedata.json
[2025-07-26 14:51:08] -rwx------. 1 boincer umatlas     36292 Jul 26 08:19 runpilot2-wrapper.sh
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas       100 Jul 26 13:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 14:51:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 13:56 run_atlas
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas       105 Jul 26 13:56 job.xml
[2025-07-26 14:51:08] -rw-r--r--. 2 boincer umatlas 143591801 Jul 26 13:56 EVNT.45743347._002151.pool.root.1
[2025-07-26 14:51:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 13:56 start_atlas.sh
[2025-07-26 14:51:08] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 13:56 shared
[2025-07-26 14:51:08] -rw-r--r--. 2 boincer umatlas    542888 Jul 26 13:56 input.tar.gz
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas         0 Jul 26 13:56 boinc_lockfile
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 13:56 pandaJob.out
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas    980125 Jul 26 13:56 agis_schedconf.cvmfs.json
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas   1593052 Jul 26 13:56 agis_ddmendpoints.agis.ALL.json
[2025-07-26 14:51:08] drwx------. 4 boincer umatlas      4096 Jul 26 13:56 pilot3
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 14:46 init_data.xml
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas 207440896 Jul 26 14:50 HITS.45743349._037621.pool.root.1
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas       529 Jul 26 14:50 boinc_task_state.xml
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas      1028 Jul 26 14:50 memory_monitor_summary.json
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas    277878 Jul 26 14:50 log.45743349._037621.job.log.tgz.1
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas        95 Jul 26 14:50 pilot_heartbeat.json
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas      7762 Jul 26 14:50 heartbeat.json
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas        27 Jul 26 14:51 wrapper_checkpoint.txt
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 14:51 boinc_mmap_file
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas       822 Jul 26 14:51 pilotlog.txt
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas    336442 Jul 26 14:51 log.45743349._037621.job.log.1
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas       357 Jul 26 14:51 output.list
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas       620 Jul 26 14:51 runtime_log
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas    634880 Jul 26 14:51 result.tar.gz
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas      8674 Jul 26 14:51 runtime_log.err
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas       651 Jul 26 14:51 jheLDmb3sz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPj0KDmNX7Yfm.diag
[2025-07-26 14:51:08] -rw-r--r--. 1 boincer umatlas     21591 Jul 26 14:51 stderr.txt
[2025-07-26 14:51:08] HITS file was successfully produced:
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas 207440896 Jul 26 14:50 shared/HITS.pool.root.1
[2025-07-26 14:51:08]  *** Contents of shared directory: ***
[2025-07-26 14:51:08] total 343980
[2025-07-26 14:51:08] -rw-r--r--. 2 boincer umatlas 143591801 Jul 26 13:56 ATLAS.root_0
[2025-07-26 14:51:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 13:56 start_atlas.sh
[2025-07-26 14:51:08] -rw-r--r--. 2 boincer umatlas    542888 Jul 26 13:56 input.tar.gz
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas 207440896 Jul 26 14:50 HITS.pool.root.1
[2025-07-26 14:51:08] -rw-------. 1 boincer umatlas    634880 Jul 26 14:51 result.tar.gz
14:51:09 (252606): run_atlas exited; CPU time 23771.584335
14:51:09 (252606): called boinc_finish(0)

</stderr_txt>
]]>

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