Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:26:39 (419392): wrapper (7.7.26015): starting
10:26:39 (419392): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 10:26:39] Arguments: --nthreads 12
[2025-07-26 10:26:39] Threads: 12
[2025-07-26 10:26:39] Checking for CVMFS
[2025-07-26 10:26:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 10:26:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 10:26:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 10:26:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 10:26:42] 2.11.5.0 7128 36000 159968 148784 0 221 44981473 45568000 18228 130560 0 316484953 99.783 199516486 27514 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 10:26:42] CVMFS is ok
[2025-07-26 10:26:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 10:26:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 10:26:42] Further information can be found at the LHC@home message board.
[2025-07-26 10:26:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 10:26:42] Checking for apptainer binary...
[2025-07-26 10:26:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 10:26:42] Running /usr/bin/apptainer --version
[2025-07-26 10:26:42] apptainer version 1.4.1-1.el9
[2025-07-26 10:26:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 10:26:43] wns0063.triumf.lcg
[2025-07-26 10:26:43] apptainer works
[2025-07-26 10:26:43] Set ATHENA_PROC_NUMBER=12
[2025-07-26 10:26:43] Set ATHENA_CORE_NUMBER=12
[2025-07-26 10:26:43] Starting ATLAS job with PandaID=6745229777
[2025-07-26 10:26:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 10:31:25]  *** The last 200 lines of the pilot log: ***
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | wrong length of table data, x=[1753550897.0], y=[1985.0] (must be same and length>=4)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | could have reported an average CPU frequency of 2540 MHz (4 samples)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | ..............................
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . Timing measurements:
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . get job = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . initial setup = 3 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . payload setup = 18 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . stage-in = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . payload execution = 31 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . stage-out = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . log creation = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | ..............................
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745229777/pilotlog.txt
[2025-07-26 10:31:25] 2025-07-26 17:30:52,260 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 10:31:25] - Log from pilotlog.txt -
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745229777/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | INFO     | extracted standard info from prmon json
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | wrong length of table data, x=[1753550897.0], y=[1985.0] (must be same and length>=4)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | could have reported an average CPU frequency of 2540 MHz (4 samples)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | ..............................
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . Timing measurements:
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . get job = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . initial setup = 3 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . payload setup = 18 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . stage-in = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . payload execution = 31 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . stage-out = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . log creation = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | ..............................
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745229777/pilotlog.txt
[2025-07-26 10:31:25] 2025-07-26 17:30:52,260 | WARNING  | 
[2025-07-26 10:31:25] [begin log extracts]
[2025-07-26 10:31:25] - Log from pilotlog.txt -
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745229777/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | INFO     | extracted standard info from prmon json
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:31:25] 2025-07-26 17:30:52,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | WARNING  | wrong length of table data, x=[1753550897.0], y=[1985.0] (must be same and length>=4)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | could have reported an average CPU frequency of 2540 MHz (4 samples)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | ..............................
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . Timing measurements:
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . get job = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,246 | INFO     | . initial setup = 3 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . payload setup = 18 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . stage-in = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . payload execution = 31 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . stage-out = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | . log creation = 0 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | ..............................
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 10:31:25] 2025-07-26 17:30:52,247 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745229777/pilotlog.txt
[2025-07-26 10:31:25] [end log extracts]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,260 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,261 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 10:31:25] 2025-07-26 17:30:52,323 | INFO     | 
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | job summary report
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | --------------------------------------------------
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | PanDA job id: 6745229777
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | task id: 45743349
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 10:28:33,722 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | pilot state: failed 
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | transexitcode: 65
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | exeerrorcode: 65
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | exitcode: 65
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | cpuconsumptiontime: 15 s
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | nevents: 0
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | neventsw: 0
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | pid: 430459
[2025-07-26 10:31:25] 2025-07-26 17:30:52,324 | INFO     | pgrp: 430459
[2025-07-26 10:31:25] 2025-07-26 17:30:52,325 | INFO     | corecount: 12
[2025-07-26 10:31:25] 2025-07-26 17:30:52,325 | INFO     | event service: False
[2025-07-26 10:31:25] 2025-07-26 17:30:52,325 | INFO     | sizes: {0: 2396641, 1: 2397323, 2: 2397323, 3: 2397550, 13: 2397812, 14: 2397868, 54: 2421251, 55: 2425547, 57: 2425547, 183: 2425713}
[2025-07-26 10:31:25] 2025-07-26 17:30:52,325 | INFO     | --------------------------------------------------
[2025-07-26 10:31:25] 2025-07-26 17:30:52,325 | INFO     | 
[2025-07-26 10:31:25] 2025-07-26 17:30:52,325 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 10:31:25] 2025-07-26 17:30:52,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,343 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 10:31:25] 2025-07-26 17:30:52,344 | INFO     | job 6745229777 has completed (purged errors)
[2025-07-26 10:31:25] 2025-07-26 17:30:52,344 | INFO     | overall cleanup function is called
[2025-07-26 10:31:25] 2025-07-26 17:30:53,352 | INFO     | --- collectZombieJob: --- 10, [430459]
[2025-07-26 10:31:25] 2025-07-26 17:30:53,352 | INFO     | zombie collector waiting for pid 430459
[2025-07-26 10:31:25] 2025-07-26 17:30:53,352 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 10:31:25] 2025-07-26 17:30:53,352 | INFO     | collected zombie processes
[2025-07-26 10:31:25] 2025-07-26 17:30:53,353 | INFO     | will attempt to kill all subprocesses of pid=430459
[2025-07-26 10:31:25] 2025-07-26 17:30:54,000 | INFO     | process IDs to be killed: [430459] (in reverse order)
[2025-07-26 10:31:25] 2025-07-26 17:30:54,244 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 10:31:25] 2025-07-26 17:30:54,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 10:31:25] 2025-07-26 17:30:54,269 | INFO     | did not find any defunct processes belonging to 430459
[2025-07-26 10:31:25] 2025-07-26 17:30:54,298 | INFO     | did not find any defunct processes belonging to 430459
[2025-07-26 10:31:25] 2025-07-26 17:30:54,298 | INFO     | ready for new job
[2025-07-26 10:31:25] 2025-07-26 17:30:54,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 10:31:25] 2025-07-26 17:30:54,300 | INFO     | ***************************************
[2025-07-26 10:31:25] 2025-07-26 17:30:54,300 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 10:31:25] 2025-07-26 17:30:54,301 | INFO     | ***************************************
[2025-07-26 10:31:25] 2025-07-26 17:30:54,301 | INFO     | 
[2025-07-26 10:31:25] 2025-07-26 17:30:54,309 | INFO     | architecture information:
[2025-07-26 10:31:25] 2025-07-26 17:30:54,310 | INFO     | executing command: cat /etc/os-release
[2025-07-26 10:31:25] 2025-07-26 17:30:54,347 | INFO     | cat /etc/os-release:
[2025-07-26 10:31:25] NAME="CentOS Linux"
[2025-07-26 10:31:25] VERSION="7 (Core)"
[2025-07-26 10:31:25] ID="centos"
[2025-07-26 10:31:25] ID_LIKE="rhel fedora"
[2025-07-26 10:31:25] VERSION_ID="7"
[2025-07-26 10:31:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 10:31:25] ANSI_COLOR="0;31"
[2025-07-26 10:31:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 10:31:25] HOME_URL="https://www.centos.org/"
[2025-07-26 10:31:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 10:31:25] 
[2025-07-26 10:31:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 10:31:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 10:31:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 10:31:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 10:31:25] 
[2025-07-26 10:31:25] 2025-07-26 17:30:54,348 | INFO     | ***************************************
[2025-07-26 10:31:25] 2025-07-26 17:30:54,851 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 10:31:25] 2025-07-26 17:30:54,937 | INFO     | sufficient remaining disk space (1944686952448 B)
[2025-07-26 10:31:25] 2025-07-26 17:30:54,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 10:31:25] 2025-07-26 17:30:54,938 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 10:31:25] 2025-07-26 17:30:54,938 | INFO     | update_server=False
[2025-07-26 10:31:25] 2025-07-26 17:30:54,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 10:31:25] 2025-07-26 17:30:55,055 | INFO     | all job control threads have been joined
[2025-07-26 10:31:25] 2025-07-26 17:30:55,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 10:31:25] 2025-07-26 17:30:55,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:31:25] 2025-07-26 17:30:55,566 | INFO     | aborting loop
[2025-07-26 10:31:25] 2025-07-26 17:30:55,705 | INFO     | all data control threads have been joined
[2025-07-26 10:31:25] 2025-07-26 17:30:55,944 | INFO     | [job] retrieve thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,061 | INFO     | [job] control thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,212 | INFO     | all payload control threads have been joined
[2025-07-26 10:31:25] 2025-07-26 17:30:56,558 | INFO     | [payload] failed_post thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,572 | INFO     | [job] job monitor thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,575 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,653 | INFO     | [job] validate thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,684 | INFO     | [data] copytool_in thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,711 | INFO     | [data] control thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,799 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:56,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:57,121 | INFO     | [payload] validate_post thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:57,218 | INFO     | [payload] control thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:57,319 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:57,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:31:25] 2025-07-26 17:30:57,367 | INFO     | [data] copytool_out thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:30:58,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 10:31:25] 2025-07-26 17:30:58,344 | INFO     | [job] queue monitor thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:31:02,078 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 10:31:25] 2025-07-26 17:31:03,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073262282560)>', '<ExcThread(monitor, started 140072489834240)>']
[2025-07-26 10:31:25] 2025-07-26 17:31:08,786 | INFO     | all workflow threads have been joined
[2025-07-26 10:31:25] 2025-07-26 17:31:08,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 10:31:25] 2025-07-26 17:31:08,787 | INFO     | traces error code: 0
[2025-07-26 10:31:25] 2025-07-26 17:31:08,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 10:31:25] 2025-07-26 17:31:24,467 | INFO     | PID=423022 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 10:31:25] 2025-07-26 17:31:24,468 | INFO     | .. there are 41 such processes running
[2025-07-26 10:31:25] 2025-07-26 17:31:24,468 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 10:31:25] 2025-07-26 17:31:24,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 10:31:25] 2025-07-26 17:31:24,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 10:31:25] 2025-07-26 17:31:24,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 10:31:25] 2025-07-26 17:31:24,468 | INFO     | [monitor] control thread has ended
[2025-07-26 10:31:25] 2025-07-26 17:31:24,873 [wrapper] ==== pilot stdout END ====
[2025-07-26 10:31:25] 2025-07-26 17:31:24,901 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 10:31:25] 2025-07-26 17:31:24,930 [wrapper] pilotpid: 423022
[2025-07-26 10:31:25] 2025-07-26 17:31:24,979 [wrapper] Pilot exit status: 0
[2025-07-26 10:31:25] 2025-07-26 17:31:25,141 [wrapper] pandaids: 6745229777
[2025-07-26 10:31:25] 2025-07-26 17:31:25,540 [wrapper] cleanup supervisor_pilot  423028 423023
[2025-07-26 10:31:25] 2025-07-26 17:31:25,551 [wrapper] Test setup, not cleaning
[2025-07-26 10:31:25] 2025-07-26 17:31:25,554 [wrapper] apfmon messages muted
[2025-07-26 10:31:25] 2025-07-26 17:31:25,556 [wrapper] ==== wrapper stdout END ====
[2025-07-26 10:31:25] 2025-07-26 17:31:25,566 [wrapper] ==== wrapper stderr END ====
[2025-07-26 10:31:25]  *** Error codes and diagnostics ***
[2025-07-26 10:31:25]     "exeErrorCode": 65,
[2025-07-26 10:31:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 10:31:25]     "pilotErrorCode": 1305,
[2025-07-26 10:31:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 10:31:25]  *** Listing of results directory ***
[2025-07-26 10:31:25] total 145880
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc    530466 Jul 26 07:40 pilot3.tar.gz
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc      5112 Jul 26 07:56 queuedata.json
[2025-07-26 10:31:25] -rwx------. 1 boinc boinc     36292 Jul 26 07:57 runpilot2-wrapper.sh
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc       100 Jul 26 10:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 10:31:25] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 10:26 run_atlas
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc       105 Jul 26 10:26 job.xml
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc      6596 Jul 26 10:26 init_data.xml
[2025-07-26 10:31:25] -rw-r--r--. 2 boinc boinc 145298100 Jul 26 10:26 EVNT.45743347._002260.pool.root.1
[2025-07-26 10:31:25] -rw-r--r--. 2 boinc boinc     15095 Jul 26 10:26 start_atlas.sh
[2025-07-26 10:31:25] drwxrwx--x. 2 boinc boinc      4096 Jul 26 10:26 shared
[2025-07-26 10:31:25] -rw-r--r--. 2 boinc boinc    542883 Jul 26 10:26 input.tar.gz
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc         0 Jul 26 10:26 boinc_lockfile
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc      2560 Jul 26 10:26 pandaJob.out
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc    980125 Jul 26 10:27 agis_schedconf.cvmfs.json
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc   1593052 Jul 26 10:27 agis_ddmendpoints.agis.ALL.json
[2025-07-26 10:31:25] drwx------. 4 boinc boinc      4096 Jul 26 10:27 pilot3
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc       951 Jul 26 10:28 memory_monitor_summary.json
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc     21253 Jul 26 10:28 log.45743349._039685.job.log.tgz.1
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc      8387 Jul 26 10:30 heartbeat.json
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc       523 Jul 26 10:31 boinc_task_state.xml
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc      8192 Jul 26 10:31 boinc_mmap_file
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc        22 Jul 26 10:31 wrapper_checkpoint.txt
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc       822 Jul 26 10:31 pilotlog.txt
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc        95 Jul 26 10:31 pilot_heartbeat.json
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc     78835 Jul 26 10:31 log.45743349._039685.job.log.1
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc       188 Jul 26 10:31 output.list
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc       620 Jul 26 10:31 runtime_log
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc    122880 Jul 26 10:31 result.tar.gz
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc       644 Jul 26 10:31 yG1KDmMWvz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeOSLDmKVNBAn.diag
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc      8485 Jul 26 10:31 runtime_log.err
[2025-07-26 10:31:25] -rw-r--r--. 1 boinc boinc     21816 Jul 26 10:31 stderr.txt
[2025-07-26 10:31:25] No HITS result produced
[2025-07-26 10:31:25]  *** Contents of shared directory: ***
[2025-07-26 10:31:25] total 142568
[2025-07-26 10:31:25] -rw-r--r--. 2 boinc boinc 145298100 Jul 26 10:26 ATLAS.root_0
[2025-07-26 10:31:25] -rw-r--r--. 2 boinc boinc     15095 Jul 26 10:26 start_atlas.sh
[2025-07-26 10:31:25] -rw-r--r--. 2 boinc boinc    542883 Jul 26 10:26 input.tar.gz
[2025-07-26 10:31:25] -rw-------. 1 boinc boinc    122880 Jul 26 10:31 result.tar.gz
10:31:27 (419392): run_atlas exited; CPU time 23.760323
10:31:27 (419392): called boinc_finish(0)

</stderr_txt>
]]>

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