Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:22:48 (3906639): wrapper (7.7.26015): starting
06:22:48 (3906639): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 06:22:48] Arguments: --nthreads 4
[2025-07-27 06:22:48] Threads: 4
[2025-07-27 06:22:48] Checking for CVMFS
[2025-07-27 06:22:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:22:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:22:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:22:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:22:48] 2.9.2.0 2645308 3607 94500 148800 0 56 35038372 36864001 0 130560 0 3336794 99.992 130435 3969 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 06:22:48] CVMFS is ok
[2025-07-27 06:22:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:22:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:22:48] Further information can be found at the LHC@home message board.
[2025-07-27 06:22:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:22:48] Checking for apptainer binary...
[2025-07-27 06:22:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:22:48] Running /usr/bin/apptainer --version
[2025-07-27 06:22:48] apptainer version 1.4.1-1.1
[2025-07-27 06:22:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:22:48] thA350
[2025-07-27 06:22:48] apptainer works
[2025-07-27 06:22:48] Set ATHENA_PROC_NUMBER=4
[2025-07-27 06:22:48] Set ATHENA_CORE_NUMBER=4
[2025-07-27 06:22:48] Starting ATLAS job with PandaID=6745135719
[2025-07-27 06:22:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 07:35:54]  *** The last 200 lines of the pilot log: ***
[2025-07-27 07:35:54] 2025-07-27 05:35:15,406 | INFO     | adding to output.list: log.45743349._037304.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/60/log.45743349._037304.job.log.tg
[2025-07-27 07:35:54] 2025-07-27 05:35:15,406 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 07:35:54] 2025-07-27 05:35:15,406 | INFO     | summary of transferred files:
[2025-07-27 07:35:54] 2025-07-27 05:35:15,406 | INFO     |  -- lfn=log.45743349._037304.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 07:35:54] 2025-07-27 05:35:15,406 | INFO     | stage-out finished correctly
[2025-07-27 07:35:54] 2025-07-27 05:35:15,976 | WARNING  | process 3916954 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 07:35:54] 2025-07-27 05:35:15,976 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745135719/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:35:54] 2025-07-27 05:35:15,976 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745135719/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:35:54] 2025-07-27 05:35:15,977 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2082306 B
[2025-07-27 07:35:54] 2025-07-27 05:35:15,977 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15789 B
[2025-07-27 07:35:54] 2025-07-27 05:35:15,977 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 07:35:54] 2025-07-27 05:35:15,987 | INFO     | sufficient remaining disk space (364995674112 B)
[2025-07-27 07:35:54] 2025-07-27 05:35:15,987 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 07:35:54] 2025-07-27 05:35:15,987 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6745135719: 2376859 B (within 2537553920 B limit)
[2025-07-27 07:35:54] 2025-07-27 05:35:15,988 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6745135719/HITS.45743349._037304.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 07:35:54] 2025-07-27 05:35:15,988 | INFO     | total size of present files: 0 B (workdir size: 2376859 B)
[2025-07-27 07:35:54] 2025-07-27 05:35:15,988 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6745135719/HITS.45743349._037304.pool.root.1 since it does not exist
[2025-07-27 07:35:54] 2025-07-27 05:35:16,026 | INFO     | number of running child processes to parent process 3916954: 1
[2025-07-27 07:35:54] 2025-07-27 05:35:16,026 | INFO     | maximum number of monitored processes: 6
[2025-07-27 07:35:54] 2025-07-27 05:35:17,227 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 07:35:54] 2025-07-27 05:35:17,272 | INFO     | 4344s have passed since pilot start - server update state is 'RUNNING'
[2025-07-27 07:35:54] 2025-07-27 05:35:18,167 | INFO     | job 6745135719 has state=finished
[2025-07-27 07:35:54] 2025-07-27 05:35:18,167 | INFO     | preparing for final server update for job 6745135719 in state='finished'
[2025-07-27 07:35:54] 2025-07-27 05:35:18,168 | INFO     | this job has now completed (state=finished)
[2025-07-27 07:35:54] 2025-07-27 05:35:18,168 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 07:35:54] 2025-07-27 05:35:18,168 | INFO     | log transfer has been attempted: DONE
[2025-07-27 07:35:54] 2025-07-27 05:35:18,168 | INFO     | job 6745135719 has finished - writing final server update
[2025-07-27 07:35:54] 2025-07-27 05:35:18,168 | INFO     | total number of processed events: 400 (read)
[2025-07-27 07:35:54] 2025-07-27 05:35:18,169 | INFO     | executing command: lscpu
[2025-07-27 07:35:54] 2025-07-27 05:35:18,186 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 07:35:54] 2025-07-27 05:35:18,529 | INFO     | monitor loop #335: job 0:6745135719 is in state 'finished'
[2025-07-27 07:35:54] 2025-07-27 05:35:18,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:35:54] 2025-07-27 05:35:21,032 | INFO     | monitor loop #336: job 0:6745135719 is in state 'finished'
[2025-07-27 07:35:54] 2025-07-27 05:35:21,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:35:54] 2025-07-27 05:35:21,770 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 07:35:54] 2025-07-27 05:35:21,771 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3507.1998750000002
[2025-07-27 07:35:54] 2025-07-27 05:35:21,772 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745135719/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:35:54] 2025-07-27 05:35:21,772 | INFO     | extracted standard info from prmon json
[2025-07-27 07:35:54] 2025-07-27 05:35:21,772 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 07:35:54] 2025-07-27 05:35:21,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 07:35:54] 2025-07-27 05:35:21,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 07:35:54] 2025-07-27 05:35:21,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 07:35:54] 2025-07-27 05:35:21,773 | INFO     | fitting pss+swap vs Time
[2025-07-27 07:35:54] 2025-07-27 05:35:21,773 | INFO     | sum of square deviations: 81266640.0
[2025-07-27 07:35:54] 2025-07-27 05:35:21,773 | INFO     | sum of deviations: -5522732112.0
[2025-07-27 07:35:54] 2025-07-27 05:35:21,773 | INFO     | mean x: 1753592420.5
[2025-07-27 07:35:54] 2025-07-27 05:35:21,773 | INFO     | mean y: 2637825.25
[2025-07-27 07:35:54] 2025-07-27 05:35:21,773 | INFO     | -- intersect: 119173569120.73799
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | intersect: 119173569120.73799
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | chi2: 0.07086925858634448
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | -- intersect: 119173569120.73799
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | current memory leak: -67.96 B/s (using 64 data points, chi2=0.07)
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | could have reported an average CPU frequency of 3761 MHz (6 samples)
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | ..............................
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | . Timing measurements:
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | . get job = 0 s
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | . initial setup = 1 s
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | . payload setup = 3 s
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | . stage-in = 0 s
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | . payload execution = 4320 s
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | . stage-out = 0 s
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | . log creation = 0 s
[2025-07-27 07:35:54] 2025-07-27 05:35:21,774 | INFO     | ..............................
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | 
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | job summary report
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | --------------------------------------------------
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | PanDA job id: 6745135719
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | task id: 45743349
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | errors: (none)
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | pilot state: finished 
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | transexitcode: 0
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | exeerrorcode: 0
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | exeerrordiag: 
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | exitcode: 0
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | exitmsg: OK
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | cpuconsumptiontime: 16386 s
[2025-07-27 07:35:54] 2025-07-27 05:35:21,804 | INFO     | nevents: 400
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | neventsw: 0
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | pid: 3916954
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | pgrp: 3916954
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | corecount: 4
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | event service: False
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | sizes: {0: 2397478, 2: 2397740, 10: 2397768, 4327: 2423977, 4328: 2432981, 4329: 2433065, 4334: 2433387}
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | --------------------------------------------------
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | 
[2025-07-27 07:35:54] 2025-07-27 05:35:21,805 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | job 6745135719 has completed (purged errors)
[2025-07-27 07:35:54] 2025-07-27 05:35:21,818 | INFO     | overall cleanup function is called
[2025-07-27 07:35:54] 2025-07-27 05:35:22,824 | INFO     | --- collectZombieJob: --- 10, [3916954]
[2025-07-27 07:35:54] 2025-07-27 05:35:22,825 | INFO     | zombie collector waiting for pid 3916954
[2025-07-27 07:35:54] 2025-07-27 05:35:22,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 07:35:54] 2025-07-27 05:35:22,825 | INFO     | collected zombie processes
[2025-07-27 07:35:54] 2025-07-27 05:35:22,825 | INFO     | will attempt to kill all subprocesses of pid=3916954
[2025-07-27 07:35:54] 2025-07-27 05:35:22,867 | INFO     | process IDs to be killed: [3916954] (in reverse order)
[2025-07-27 07:35:54] 2025-07-27 05:35:22,891 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 07:35:54] 2025-07-27 05:35:22,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 07:35:54] 2025-07-27 05:35:22,893 | INFO     | did not find any defunct processes belonging to 3916954
[2025-07-27 07:35:54] 2025-07-27 05:35:22,894 | INFO     | did not find any defunct processes belonging to 3916954
[2025-07-27 07:35:54] 2025-07-27 05:35:22,894 | INFO     | ready for new job
[2025-07-27 07:35:54] 2025-07-27 05:35:22,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 07:35:54] 2025-07-27 05:35:22,894 | INFO     | ***************************************
[2025-07-27 07:35:54] 2025-07-27 05:35:22,894 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 07:35:54] 2025-07-27 05:35:22,894 | INFO     | ***************************************
[2025-07-27 07:35:54] 2025-07-27 05:35:22,894 | INFO     | 
[2025-07-27 07:35:54] 2025-07-27 05:35:22,895 | INFO     | architecture information:
[2025-07-27 07:35:54] 2025-07-27 05:35:22,895 | INFO     | executing command: cat /etc/os-release
[2025-07-27 07:35:54] 2025-07-27 05:35:22,904 | INFO     | cat /etc/os-release:
[2025-07-27 07:35:54] NAME="CentOS Linux"
[2025-07-27 07:35:54] VERSION="7 (Core)"
[2025-07-27 07:35:54] ID="centos"
[2025-07-27 07:35:54] ID_LIKE="rhel fedora"
[2025-07-27 07:35:54] VERSION_ID="7"
[2025-07-27 07:35:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 07:35:54] ANSI_COLOR="0;31"
[2025-07-27 07:35:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 07:35:54] HOME_URL="https://www.centos.org/"
[2025-07-27 07:35:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 07:35:54] 
[2025-07-27 07:35:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 07:35:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 07:35:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 07:35:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 07:35:54] 
[2025-07-27 07:35:54] 2025-07-27 05:35:22,904 | INFO     | ***************************************
[2025-07-27 07:35:54] 2025-07-27 05:35:23,408 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 07:35:54] 2025-07-27 05:35:23,421 | INFO     | sufficient remaining disk space (364993576960 B)
[2025-07-27 07:35:54] 2025-07-27 05:35:23,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 07:35:54] 2025-07-27 05:35:23,421 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 07:35:54] 2025-07-27 05:35:23,421 | INFO     | update_server=False
[2025-07-27 07:35:54] 2025-07-27 05:35:23,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 07:35:54] 2025-07-27 05:35:23,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:35:54] 2025-07-27 05:35:23,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 07:35:54] 2025-07-27 05:35:23,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 07:35:54] 2025-07-27 05:35:23,537 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 07:35:54] 2025-07-27 05:35:23,537 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 07:35:54] 2025-07-27 05:35:23,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:35:54] 2025-07-27 05:35:23,537 | INFO     | will abort loop
[2025-07-27 07:35:54] 2025-07-27 05:35:24,333 | INFO     | all payload control threads have been joined
[2025-07-27 07:35:54] 2025-07-27 05:35:24,427 | INFO     | [job] queue monitor thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:24,427 | INFO     | [job] retrieve thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:24,471 | INFO     | all data control threads have been joined
[2025-07-27 07:35:54] 2025-07-27 05:35:24,543 | INFO     | [job] job monitor thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:24,682 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:24,991 | INFO     | all job control threads have been joined
[2025-07-27 07:35:54] 2025-07-27 05:35:25,173 | INFO     | [data] copytool_in thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,312 | INFO     | [payload] validate_post thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,339 | INFO     | [payload] control thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,452 | INFO     | [data] copytool_out thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,477 | INFO     | [data] control thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,541 | INFO     | [job] validate thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,649 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,693 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,851 | INFO     | [payload] failed_post thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:25,997 | INFO     | [job] control thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:27,428 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:34,219 | INFO     | job.realtimelogging is not enabled
[2025-07-27 07:35:54] 2025-07-27 05:35:35,224 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 07:35:54] 2025-07-27 05:35:36,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748220659520)>', '<ExcThread(monitor, started 139747850688256)>']
[2025-07-27 07:35:54] 2025-07-27 05:35:41,406 | INFO     | all workflow threads have been joined
[2025-07-27 07:35:54] 2025-07-27 05:35:41,406 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 07:35:54] 2025-07-27 05:35:41,406 | INFO     | traces error code: 0
[2025-07-27 07:35:54] 2025-07-27 05:35:41,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 07:35:54] 2025-07-27 05:35:54,419 | INFO     | PID=3910343 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 07:35:54] 2025-07-27 05:35:54,419 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 07:35:54] 2025-07-27 05:35:54,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 07:35:54] 2025-07-27 05:35:54,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 07:35:54] 2025-07-27 05:35:54,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 07:35:54] 2025-07-27 05:35:54,419 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 07:35:54] 2025-07-27 05:35:54,419 | INFO     | [monitor] control thread has ended
[2025-07-27 07:35:54] 2025-07-27 05:35:54,464 [wrapper] ==== pilot stdout END ====
[2025-07-27 07:35:54] 2025-07-27 05:35:54,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 07:35:54] 2025-07-27 05:35:54,469 [wrapper] pilotpid: 3910343
[2025-07-27 07:35:54] 2025-07-27 05:35:54,471 [wrapper] Pilot exit status: 0
[2025-07-27 07:35:54] 2025-07-27 05:35:54,479 [wrapper] pandaids: 6745135719
[2025-07-27 07:35:54] 2025-07-27 05:35:54,495 [wrapper] cleanup supervisor_pilot 3926901 3910344
[2025-07-27 07:35:54] 2025-07-27 05:35:54,498 [wrapper] Test setup, not cleaning
[2025-07-27 07:35:54] 2025-07-27 05:35:54,500 [wrapper] apfmon messages muted
[2025-07-27 07:35:54] 2025-07-27 05:35:54,502 [wrapper] ==== wrapper stdout END ====
[2025-07-27 07:35:54] 2025-07-27 05:35:54,505 [wrapper] ==== wrapper stderr END ====
[2025-07-27 07:35:54]  *** Error codes and diagnostics ***
[2025-07-27 07:35:54]     "exeErrorCode": 0,
[2025-07-27 07:35:54]     "exeErrorDiag": "",
[2025-07-27 07:35:54]     "pilotErrorCode": 0,
[2025-07-27 07:35:54]     "pilotErrorDiag": "",
[2025-07-27 07:35:54]  *** Listing of results directory ***
[2025-07-27 07:35:54] total 351288
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc    530466 Jul 26 13:39 pilot3.tar.gz
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc      5112 Jul 26 13:44 queuedata.json
[2025-07-27 07:35:54] -rwx------ 1 boinc boinc     36292 Jul 26 13:45 runpilot2-wrapper.sh
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc       100 Jul 27 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 07:35:54] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 06:22 run_atlas
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc       105 Jul 27 06:22 job.xml
[2025-07-27 07:35:54] -rw-r--r-- 2 boinc boinc 141898842 Jul 27 06:22 EVNT.45743347._002131.pool.root.1
[2025-07-27 07:35:54] drwxrwx--x 2 boinc boinc      4096 Jul 27 06:22 shared
[2025-07-27 07:35:54] -rw-r--r-- 2 boinc boinc    542896 Jul 27 06:22 input.tar.gz
[2025-07-27 07:35:54] -rw-r--r-- 2 boinc boinc     15095 Jul 27 06:22 start_atlas.sh
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc         0 Jul 27 06:22 boinc_setup_complete
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc      6524 Jul 27 06:22 init_data.xml
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc         0 Jul 27 06:22 boinc_lockfile
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc      2563 Jul 27 06:22 pandaJob.out
[2025-07-27 07:35:54] -rw------- 1 boinc boinc    980125 Jul 27 06:22 agis_schedconf.cvmfs.json
[2025-07-27 07:35:54] -rw------- 1 boinc boinc   1593052 Jul 27 06:22 agis_ddmendpoints.agis.ALL.json
[2025-07-27 07:35:54] drwx------ 4 boinc boinc      4096 Jul 27 06:22 pilot3
[2025-07-27 07:35:54] -rw------- 1 boinc boinc 212609650 Jul 27 07:34 HITS.45743349._037304.pool.root.1
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc       529 Jul 27 07:34 boinc_task_state.xml
[2025-07-27 07:35:54] -rw------- 1 boinc boinc      1018 Jul 27 07:35 memory_monitor_summary.json
[2025-07-27 07:35:54] -rw------- 1 boinc boinc    230113 Jul 27 07:35 log.45743349._037304.job.log.tgz.1
[2025-07-27 07:35:54] -rw------- 1 boinc boinc        95 Jul 27 07:35 pilot_heartbeat.json
[2025-07-27 07:35:54] -rw------- 1 boinc boinc      7750 Jul 27 07:35 heartbeat.json
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc        27 Jul 27 07:35 wrapper_checkpoint.txt
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc      8192 Jul 27 07:35 boinc_mmap_file
[2025-07-27 07:35:54] -rw------- 1 boinc boinc       817 Jul 27 07:35 pilotlog.txt
[2025-07-27 07:35:54] -rw------- 1 boinc boinc    431677 Jul 27 07:35 log.45743349._037304.job.log.1
[2025-07-27 07:35:54] -rw------- 1 boinc boinc       357 Jul 27 07:35 output.list
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc       620 Jul 27 07:35 runtime_log
[2025-07-27 07:35:54] -rw------- 1 boinc boinc    686080 Jul 27 07:35 result.tar.gz
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc      8734 Jul 27 07:35 runtime_log.err
[2025-07-27 07:35:54] -rw------- 1 boinc boinc       658 Jul 27 07:35 hLYLDmyVsz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbh0KDmOIE7Fn.diag
[2025-07-27 07:35:54] -rw-r--r-- 1 boinc boinc     22528 Jul 27 07:35 stderr.txt
[2025-07-27 07:35:54] HITS file was successfully produced:
[2025-07-27 07:35:54] -rw------- 1 boinc boinc 212609650 Jul 27 07:34 shared/HITS.pool.root.1
[2025-07-27 07:35:54]  *** Contents of shared directory: ***
[2025-07-27 07:35:54] total 347432
[2025-07-27 07:35:54] -rw-r--r-- 2 boinc boinc 141898842 Jul 27 06:22 ATLAS.root_0
[2025-07-27 07:35:54] -rw-r--r-- 2 boinc boinc    542896 Jul 27 06:22 input.tar.gz
[2025-07-27 07:35:54] -rw-r--r-- 2 boinc boinc     15095 Jul 27 06:22 start_atlas.sh
[2025-07-27 07:35:54] -rw------- 1 boinc boinc 212609650 Jul 27 07:34 HITS.pool.root.1
[2025-07-27 07:35:54] -rw------- 1 boinc boinc    686080 Jul 27 07:35 result.tar.gz
07:35:56 (3906639): run_atlas exited; CPU time 16399.210695
07:35:56 (3906639): called boinc_finish(0)

</stderr_txt>
]]>

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