Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:14:13 (2576055): wrapper (7.7.26015): starting
13:14:13 (2576055): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 13:14:13] Arguments: --nthreads 8
[2025-07-26 13:14:13] Threads: 8
[2025-07-26 13:14:13] Checking for CVMFS
[2025-07-26 13:14:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 13:14:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 13:14:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 13:14:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 13:14:14] 2.13.0.0 891182 26054 236156 148783 0 676 28743658 32935937 17368 16776704 0 122813796 99.593 187853732 20220 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 13:14:14] CVMFS is ok
[2025-07-26 13:14:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 13:14:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 13:14:14] Further information can be found at the LHC@home message board.
[2025-07-26 13:14:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 13:14:14] Checking for apptainer binary...
[2025-07-26 13:14:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 13:14:14] Running /usr/bin/apptainer --version
[2025-07-26 13:14:14] apptainer version 1.4.1-1.el9
[2025-07-26 13:14:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 13:14:14] c7-3-29.aglt2.org
[2025-07-26 13:14:14] apptainer works
[2025-07-26 13:14:14] Set ATHENA_PROC_NUMBER=8
[2025-07-26 13:14:14] Set ATHENA_CORE_NUMBER=8
[2025-07-26 13:14:14] Starting ATLAS job with PandaID=6745135773
[2025-07-26 13:14:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 14:41:07]  *** The last 200 lines of the pilot log: ***
[2025-07-26 14:41:07]  lfn=log.45743349._037358.job.log.tgz.1
[2025-07-26 14:41:07]  mtime=0
[2025-07-26 14:41:07]  protocol_id=None
[2025-07-26 14:41:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 14:41:07]  replicas=None
[2025-07-26 14:41:07]  scope=mc23_13p6TeV
[2025-07-26 14:41:07]  status=None
[2025-07-26 14:41:07]  status_code=0
[2025-07-26 14:41:07]  storage_token=
[2025-07-26 14:41:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745135773/log.45743349._037358.job.log.tgz.1
[2025-07-26 14:41:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/fc/log.45743349._037358.job.log.tgz.1
[2025-07-26 14:41:07]  workdir=None
[2025-07-26 14:41:07] ]
[2025-07-26 14:41:07] 2025-07-26 18:40:27,471 | INFO     | transferring file log.45743349._037358.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745135773/log.45743349._037358.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 14:41:07] 2025-07-26 18:40:27,471 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745135773/log.45743349._037358.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._037358.job
[2025-07-26 14:41:07] 2025-07-26 18:40:27,493 | INFO     | adding to output.list: log.45743349._037358.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/fc/log.45743349._037358.job.log.tg
[2025-07-26 14:41:07] 2025-07-26 18:40:27,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 14:41:07] 2025-07-26 18:40:27,494 | INFO     | summary of transferred files:
[2025-07-26 14:41:07] 2025-07-26 18:40:27,494 | INFO     |  -- lfn=log.45743349._037358.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 14:41:07] 2025-07-26 18:40:27,495 | INFO     | stage-out finished correctly
[2025-07-26 14:41:07] 2025-07-26 18:40:29,340 | INFO     | monitor loop #374: job 0:6745135773 is in state 'finished'
[2025-07-26 14:41:07] 2025-07-26 18:40:29,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 14:41:07] 2025-07-26 18:40:29,997 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 14:41:07] 2025-07-26 18:40:30,044 | INFO     | job 6745135773 has state=finished
[2025-07-26 14:41:07] 2025-07-26 18:40:30,044 | INFO     | preparing for final server update for job 6745135773 in state='finished'
[2025-07-26 14:41:07] 2025-07-26 18:40:30,045 | INFO     | this job has now completed (state=finished)
[2025-07-26 14:41:07] 2025-07-26 18:40:30,045 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 14:41:07] 2025-07-26 18:40:30,045 | INFO     | log transfer has been attempted: DONE
[2025-07-26 14:41:07] 2025-07-26 18:40:30,045 | INFO     | job 6745135773 has finished - writing final server update
[2025-07-26 14:41:07] 2025-07-26 18:40:30,045 | INFO     | total number of processed events: 400 (read)
[2025-07-26 14:41:07] 2025-07-26 18:40:30,046 | INFO     | executing command: lscpu
[2025-07-26 14:41:07] 2025-07-26 18:40:30,113 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 14:41:07] 2025-07-26 18:40:31,843 | INFO     | monitor loop #375: job 0:6745135773 is in state 'finished'
[2025-07-26 14:41:07] 2025-07-26 18:40:31,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 14:41:07] 2025-07-26 18:40:34,347 | INFO     | monitor loop #376: job 0:6745135773 is in state 'finished'
[2025-07-26 14:41:07] 2025-07-26 18:40:34,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 14:41:07] 2025-07-26 18:40:35,747 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 14:41:07] 2025-07-26 18:40:35,751 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3014.7688020833316
[2025-07-26 14:41:07] 2025-07-26 18:40:35,777 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745135773/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 14:41:07] 2025-07-26 18:40:35,778 | INFO     | extracted standard info from prmon json
[2025-07-26 14:41:07] 2025-07-26 18:40:35,778 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 14:41:07] 2025-07-26 18:40:35,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 14:41:07] 2025-07-26 18:40:35,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 14:41:07] 2025-07-26 18:40:35,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 14:41:07] 2025-07-26 18:40:35,780 | INFO     | fitting pss+swap vs Time
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | sum of square deviations: 141539398.0
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | sum of deviations: -18170731972.0
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | mean x: 1753552725.0
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | mean y: 2448002.5584415584
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | -- intersect: 225122358182.9396
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | intersect: 225122358182.9396
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | chi2: 0.17727832188400078
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | -- intersect: 225122358182.9396
[2025-07-26 14:41:07] 2025-07-26 18:40:35,781 | INFO     | current memory leak: -128.38 B/s (using 77 data points, chi2=0.18)
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | could have reported an average CPU frequency of 3071 MHz (6 samples)
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | ..............................
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | . Timing measurements:
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | . get job = 0 s
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | . initial setup = 2 s
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | . payload setup = 9 s
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | . stage-in = 0 s
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | . payload execution = 5126 s
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | . stage-out = 0 s
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | . log creation = 0 s
[2025-07-26 14:41:07] 2025-07-26 18:40:35,782 | INFO     | ..............................
[2025-07-26 14:41:07] 2025-07-26 18:40:35,839 | INFO     | 
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | job summary report
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | --------------------------------------------------
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | PanDA job id: 6745135773
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | task id: 45743349
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | errors: (none)
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | pilot state: finished 
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | transexitcode: 0
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | exeerrorcode: 0
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | exeerrordiag: 
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | exitcode: 0
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | exitmsg: OK
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | cpuconsumptiontime: 37650 s
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | nevents: 400
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | neventsw: 0
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | pid: 2593586
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | pgrp: 2593586
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | corecount: 8
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | event service: False
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | sizes: {0: 2397304, 1: 2397503, 7: 2397765, 11: 2397793, 5140: 2423990, 5141: 2423989, 5142: 2433171, 5144: 2433227, 5150: 2433421}
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | --------------------------------------------------
[2025-07-26 14:41:07] 2025-07-26 18:40:35,840 | INFO     | 
[2025-07-26 14:41:07] 2025-07-26 18:40:35,841 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 14:41:07] 2025-07-26 18:40:35,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,857 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,857 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 14:41:07] 2025-07-26 18:40:35,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,859 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 14:41:07] 2025-07-26 18:40:35,859 | INFO     | job 6745135773 has completed (purged errors)
[2025-07-26 14:41:07] 2025-07-26 18:40:35,859 | INFO     | overall cleanup function is called
[2025-07-26 14:41:07] 2025-07-26 18:40:36,866 | INFO     | --- collectZombieJob: --- 10, [2593586]
[2025-07-26 14:41:07] 2025-07-26 18:40:36,866 | INFO     | zombie collector waiting for pid 2593586
[2025-07-26 14:41:07] 2025-07-26 18:40:36,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 14:41:07] 2025-07-26 18:40:36,866 | INFO     | collected zombie processes
[2025-07-26 14:41:07] 2025-07-26 18:40:36,866 | INFO     | will attempt to kill all subprocesses of pid=2593586
[2025-07-26 14:41:07] 2025-07-26 18:40:37,341 | INFO     | process IDs to be killed: [2593586] (in reverse order)
[2025-07-26 14:41:07] 2025-07-26 18:40:37,479 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 14:41:07] 2025-07-26 18:40:37,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 14:41:07] 2025-07-26 18:40:37,496 | INFO     | did not find any defunct processes belonging to 2593586
[2025-07-26 14:41:07] 2025-07-26 18:40:37,513 | INFO     | did not find any defunct processes belonging to 2593586
[2025-07-26 14:41:07] 2025-07-26 18:40:37,513 | INFO     | ready for new job
[2025-07-26 14:41:07] 2025-07-26 18:40:37,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 14:41:07] 2025-07-26 18:40:37,515 | INFO     | ***************************************
[2025-07-26 14:41:07] 2025-07-26 18:40:37,517 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 14:41:07] 2025-07-26 18:40:37,517 | INFO     | ***************************************
[2025-07-26 14:41:07] 2025-07-26 18:40:37,517 | INFO     | 
[2025-07-26 14:41:07] 2025-07-26 18:40:37,535 | INFO     | architecture information:
[2025-07-26 14:41:07] 2025-07-26 18:40:37,536 | INFO     | executing command: cat /etc/os-release
[2025-07-26 14:41:07] 2025-07-26 18:40:37,556 | INFO     | cat /etc/os-release:
[2025-07-26 14:41:07] NAME="CentOS Linux"
[2025-07-26 14:41:07] VERSION="7 (Core)"
[2025-07-26 14:41:07] ID="centos"
[2025-07-26 14:41:07] ID_LIKE="rhel fedora"
[2025-07-26 14:41:07] VERSION_ID="7"
[2025-07-26 14:41:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 14:41:07] ANSI_COLOR="0;31"
[2025-07-26 14:41:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 14:41:07] HOME_URL="https://www.centos.org/"
[2025-07-26 14:41:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 14:41:07] 
[2025-07-26 14:41:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 14:41:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 14:41:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 14:41:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 14:41:07] 
[2025-07-26 14:41:07] 2025-07-26 18:40:37,557 | INFO     | ***************************************
[2025-07-26 14:41:07] 2025-07-26 18:40:38,060 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 14:41:07] 2025-07-26 18:40:38,085 | INFO     | sufficient remaining disk space (76106694656 B)
[2025-07-26 14:41:07] 2025-07-26 18:40:38,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 14:41:07] 2025-07-26 18:40:38,085 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 14:41:07] 2025-07-26 18:40:38,085 | INFO     | update_server=False
[2025-07-26 14:41:07] 2025-07-26 18:40:38,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 14:41:07] 2025-07-26 18:40:38,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:41:07] 2025-07-26 18:40:38,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 14:41:07] 2025-07-26 18:40:38,086 | INFO     | aborting loop
[2025-07-26 14:41:07] 2025-07-26 18:40:38,183 | INFO     | all job control threads have been joined
[2025-07-26 14:41:07] 2025-07-26 18:40:38,534 | INFO     | all payload control threads have been joined
[2025-07-26 14:41:07] 2025-07-26 18:40:39,071 | INFO     | all data control threads have been joined
[2025-07-26 14:41:07] 2025-07-26 18:40:39,091 | INFO     | [job] retrieve thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:39,091 | INFO     | [job] job monitor thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:39,188 | INFO     | [job] control thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:39,202 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:39,539 | INFO     | [payload] control thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,076 | INFO     | [data] control thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,091 | INFO     | [data] copytool_out thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,251 | INFO     | [job] validate thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,290 | INFO     | [payload] failed_post thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,439 | INFO     | [data] copytool_in thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,509 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,547 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 14:41:07] 2025-07-26 18:40:40,648 | INFO     | [payload] validate_post thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:40,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:41:07] 2025-07-26 18:40:41,855 | INFO     | [job] queue monitor thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:44,561 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:48,887 | INFO     | job.realtimelogging is not enabled
[2025-07-26 14:41:07] 2025-07-26 18:40:49,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 14:41:07] 2025-07-26 18:40:50,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949479647040)>', '<ExcThread(monitor, started 139948984346368)>']
[2025-07-26 14:41:07] 2025-07-26 18:40:55,206 | INFO     | all workflow threads have been joined
[2025-07-26 14:41:07] 2025-07-26 18:40:55,206 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 14:41:07] 2025-07-26 18:40:55,207 | INFO     | traces error code: 0
[2025-07-26 14:41:07] 2025-07-26 18:40:55,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 14:41:07] 2025-07-26 18:41:07,610 | INFO     | PID=2582308 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 14:41:07] 2025-07-26 18:41:07,611 | INFO     | .. there are 27 such processes running
[2025-07-26 14:41:07] 2025-07-26 18:41:07,611 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 14:41:07] 2025-07-26 18:41:07,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 14:41:07] 2025-07-26 18:41:07,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 14:41:07] 2025-07-26 18:41:07,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 14:41:07] 2025-07-26 18:41:07,611 | INFO     | [monitor] control thread has ended
[2025-07-26 14:41:07] 2025-07-26 18:41:07,725 [wrapper] ==== pilot stdout END ====
[2025-07-26 14:41:07] 2025-07-26 18:41:07,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 14:41:07] 2025-07-26 18:41:07,734 [wrapper] pilotpid: 2582308
[2025-07-26 14:41:07] 2025-07-26 18:41:07,737 [wrapper] Pilot exit status: 0
[2025-07-26 14:41:07] 2025-07-26 18:41:07,753 [wrapper] pandaids: 6745135773
[2025-07-26 14:41:07] 2025-07-26 18:41:07,831 [wrapper] cleanup supervisor_pilot 3013596 2582309
[2025-07-26 14:41:07] 2025-07-26 18:41:07,836 [wrapper] Test setup, not cleaning
[2025-07-26 14:41:07] 2025-07-26 18:41:07,841 [wrapper] apfmon messages muted
[2025-07-26 14:41:07] 2025-07-26 18:41:07,844 [wrapper] ==== wrapper stdout END ====
[2025-07-26 14:41:07] 2025-07-26 18:41:07,848 [wrapper] ==== wrapper stderr END ====
[2025-07-26 14:41:07]  *** Error codes and diagnostics ***
[2025-07-26 14:41:07]     "exeErrorCode": 0,
[2025-07-26 14:41:07]     "exeErrorDiag": "",
[2025-07-26 14:41:07]     "pilotErrorCode": 0,
[2025-07-26 14:41:07]     "pilotErrorDiag": "",
[2025-07-26 14:41:07]  *** Listing of results directory ***
[2025-07-26 14:41:07] total 349424
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 07:39 pilot3.tar.gz
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 07:42 queuedata.json
[2025-07-26 14:41:07] -rwx------. 1 boincer umatlas     36292 Jul 26 07:43 runpilot2-wrapper.sh
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas       100 Jul 26 13:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 14:41:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 13:14 run_atlas
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas       105 Jul 26 13:14 job.xml
[2025-07-26 14:41:07] -rw-r--r--. 2 boincer umatlas 146605109 Jul 26 13:14 EVNT.45743347._002134.pool.root.1
[2025-07-26 14:41:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 13:14 start_atlas.sh
[2025-07-26 14:41:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 13:14 shared
[2025-07-26 14:41:07] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 13:14 input.tar.gz
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas         0 Jul 26 13:14 boinc_lockfile
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 13:14 pandaJob.out
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas    980125 Jul 26 13:14 agis_schedconf.cvmfs.json
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas   1593052 Jul 26 13:14 agis_ddmendpoints.agis.ALL.json
[2025-07-26 14:41:07] drwx------. 4 boincer umatlas      4096 Jul 26 13:14 pilot3
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas      6933 Jul 26 14:38 init_data.xml
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas 205705204 Jul 26 14:39 HITS.45743349._037358.pool.root.1
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas       529 Jul 26 14:40 boinc_task_state.xml
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas        95 Jul 26 14:40 pilot_heartbeat.json
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas      1031 Jul 26 14:40 memory_monitor_summary.json
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas    312115 Jul 26 14:40 log.45743349._037358.job.log.tgz.1
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas      7769 Jul 26 14:40 heartbeat.json
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 14:41 boinc_mmap_file
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas        27 Jul 26 14:41 wrapper_checkpoint.txt
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas       823 Jul 26 14:41 pilotlog.txt
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas    498359 Jul 26 14:41 log.45743349._037358.job.log.1
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas       357 Jul 26 14:41 output.list
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas       620 Jul 26 14:41 runtime_log
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas    829440 Jul 26 14:41 result.tar.gz
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 14:41 runtime_log.err
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas       652 Jul 26 14:41 HZpMDmpUsz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTh0KDmncTaMm.diag
[2025-07-26 14:41:07] -rw-r--r--. 1 boincer umatlas     21684 Jul 26 14:41 stderr.txt
[2025-07-26 14:41:07] HITS file was successfully produced:
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas 205705204 Jul 26 14:39 shared/HITS.pool.root.1
[2025-07-26 14:41:07]  *** Contents of shared directory: ***
[2025-07-26 14:41:07] total 345420
[2025-07-26 14:41:07] -rw-r--r--. 2 boincer umatlas 146605109 Jul 26 13:14 ATLAS.root_0
[2025-07-26 14:41:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 13:14 start_atlas.sh
[2025-07-26 14:41:07] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 13:14 input.tar.gz
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas 205705204 Jul 26 14:39 HITS.pool.root.1
[2025-07-26 14:41:07] -rw-------. 1 boincer umatlas    829440 Jul 26 14:41 result.tar.gz
14:41:09 (2576055): run_atlas exited; CPU time 37790.571354
14:41:09 (2576055): called boinc_finish(0)

</stderr_txt>
]]>

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