Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:49 (193922): wrapper (7.7.26015): starting
13:19:49 (193922): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 13:19:49] Arguments: --nthreads 8
[2025-07-26 13:19:49] Threads: 8
[2025-07-26 13:19:49] Checking for CVMFS
[2025-07-26 13:19:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 13:19:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 13:19:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 13:19:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 13:19:50] 2.12.6.0 2498914 17215 429092 148784 0 106 27091910 32935937 16574 16776704 0 54173195 99.574 90487753 18853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 13:19:50] CVMFS is ok
[2025-07-26 13:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 13:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 13:19:50] Further information can be found at the LHC@home message board.
[2025-07-26 13:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 13:19:50] Checking for apptainer binary...
[2025-07-26 13:19:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 13:19:50] Running /usr/bin/apptainer --version
[2025-07-26 13:19:50] apptainer version 1.4.1-1.el9
[2025-07-26 13:19:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 13:19:50] c6-2-11-3.aglt2.org
[2025-07-26 13:19:50] apptainer works
[2025-07-26 13:19:50] Set ATHENA_PROC_NUMBER=8
[2025-07-26 13:19:50] Set ATHENA_CORE_NUMBER=8
[2025-07-26 13:19:50] Starting ATLAS job with PandaID=6745096484
[2025-07-26 13:19:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 15:17:35]  *** The last 200 lines of the pilot log: ***
[2025-07-26 15:17:35] 2025-07-26 19:17:02,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 15:17:35] 2025-07-26 19:17:02,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 15:17:35] 2025-07-26 19:17:02,251 | INFO     | fitting pss+swap vs Time
[2025-07-26 15:17:35] 2025-07-26 19:17:02,252 | INFO     | sum of square deviations: 471562330.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,253 | INFO     | sum of deviations: -21223488318.000004
[2025-07-26 15:17:35] 2025-07-26 19:17:02,253 | INFO     | mean x: 1753553922.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,253 | INFO     | mean y: 2205681.9826086955
[2025-07-26 15:17:35] 2025-07-26 19:17:02,253 | INFO     | -- intersect: 78923970231.22064
[2025-07-26 15:17:35] 2025-07-26 19:17:02,253 | INFO     | intersect: 78923970231.22064
[2025-07-26 15:17:35] 2025-07-26 19:17:02,253 | INFO     | chi2: 2.8049012617852207
[2025-07-26 15:17:35] 2025-07-26 19:17:02,254 | INFO     | sum of square deviations: 412686807.5
[2025-07-26 15:17:35] 2025-07-26 19:17:02,254 | INFO     | sum of deviations: -12801165034.5
[2025-07-26 15:17:35] 2025-07-26 19:17:02,254 | INFO     | mean x: 1753553769.5
[2025-07-26 15:17:35] 2025-07-26 19:17:02,254 | INFO     | mean y: 2226891.118181818
[2025-07-26 15:17:35] 2025-07-26 19:17:02,255 | INFO     | -- intersect: 54395851286.875175
[2025-07-26 15:17:35] 2025-07-26 19:17:02,255 | INFO     | intersect: 54395851286.875175
[2025-07-26 15:17:35] 2025-07-26 19:17:02,255 | INFO     | chi2: 2.012322105131334
[2025-07-26 15:17:35] 2025-07-26 19:17:02,255 | INFO     | current chi2=2.012322105131334 (change=28.256936080147003 %)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,255 | INFO     | sum of square deviations: 358927660.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,256 | INFO     | sum of deviations: -11923690374.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,256 | INFO     | mean x: 1753553617.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,256 | INFO     | mean y: 2229391.6
[2025-07-26 15:17:35] 2025-07-26 19:17:02,256 | INFO     | -- intersect: 58255835099.54623
[2025-07-26 15:17:35] 2025-07-26 19:17:02,256 | INFO     | intersect: 58255835099.54623
[2025-07-26 15:17:35] 2025-07-26 19:17:02,257 | INFO     | chi2: 2.0024474133752848
[2025-07-26 15:17:35] 2025-07-26 19:17:02,257 | INFO     | current chi2=2.0024474133752848 (change=0.4907112897517368 %)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,257 | INFO     | right removable region: 104
[2025-07-26 15:17:35] 2025-07-26 19:17:02,257 | INFO     | sum of square deviations: 412686807.5
[2025-07-26 15:17:35] 2025-07-26 19:17:02,258 | INFO     | sum of deviations: -37606908639.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,258 | INFO     | mean x: 1753554074.5
[2025-07-26 15:17:35] 2025-07-26 19:17:02,258 | INFO     | mean y: 2247388.5454545454
[2025-07-26 15:17:35] 2025-07-26 19:17:02,258 | INFO     | -- intersect: 159798360748.11218
[2025-07-26 15:17:35] 2025-07-26 19:17:02,258 | INFO     | intersect: 159798360748.11218
[2025-07-26 15:17:35] 2025-07-26 19:17:02,259 | INFO     | chi2: 1.1686480770169325
[2025-07-26 15:17:35] 2025-07-26 19:17:02,259 | INFO     | current chi2=1.1686480770169325 (change=58.33550032798198 %)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,259 | INFO     | sum of square deviations: 358927660.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,260 | INFO     | sum of deviations: -33977638608.999996
[2025-07-26 15:17:35] 2025-07-26 19:17:02,260 | INFO     | mean x: 1753554227.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,260 | INFO     | mean y: 2237035.238095238
[2025-07-26 15:17:35] 2025-07-26 19:17:02,260 | INFO     | -- intersect: 166001234733.80035
[2025-07-26 15:17:35] 2025-07-26 19:17:02,261 | INFO     | intersect: 166001234733.80035
[2025-07-26 15:17:35] 2025-07-26 19:17:02,261 | INFO     | chi2: 1.1679296429681538
[2025-07-26 15:17:35] 2025-07-26 19:17:02,261 | INFO     | current chi2=1.1679296429681538 (change=0.06147565404056913 %)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,261 | INFO     | left removable region: 20
[2025-07-26 15:17:35] 2025-07-26 19:17:02,261 | INFO     | sum of square deviations: 183761585.0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,262 | INFO     | sum of deviations: -17230094373.5
[2025-07-26 15:17:35] 2025-07-26 19:17:02,262 | INFO     | mean x: 1753554196.5
[2025-07-26 15:17:35] 2025-07-26 19:17:02,262 | INFO     | mean y: 2238356.6071428573
[2025-07-26 15:17:35] 2025-07-26 19:17:02,262 | INFO     | -- intersect: 164421283255.1476
[2025-07-26 15:17:35] 2025-07-26 19:17:02,262 | INFO     | intersect: 164421283255.1476
[2025-07-26 15:17:35] 2025-07-26 19:17:02,262 | INFO     | chi2: 0.2722635647201096
[2025-07-26 15:17:35] 2025-07-26 19:17:02,263 | INFO     | -- intersect: 164421283255.1476
[2025-07-26 15:17:35] 2025-07-26 19:17:02,263 | INFO     | current memory leak: -93.76 B/s (using 84 data points, chi2=0.27)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,263 | INFO     | could have reported an average CPU frequency of 2589 MHz (7 samples)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,263 | INFO     | ..............................
[2025-07-26 15:17:35] 2025-07-26 19:17:02,263 | INFO     | . Timing measurements:
[2025-07-26 15:17:35] 2025-07-26 19:17:02,263 | INFO     | . get job = 0 s
[2025-07-26 15:17:35] 2025-07-26 19:17:02,263 | INFO     | . initial setup = 2 s
[2025-07-26 15:17:35] 2025-07-26 19:17:02,264 | INFO     | . payload setup = 11 s
[2025-07-26 15:17:35] 2025-07-26 19:17:02,264 | INFO     | . stage-in = 0 s
[2025-07-26 15:17:35] 2025-07-26 19:17:02,264 | INFO     | . payload execution = 6970 s
[2025-07-26 15:17:35] 2025-07-26 19:17:02,264 | INFO     | . stage-out = 0 s
[2025-07-26 15:17:35] 2025-07-26 19:17:02,264 | INFO     | . log creation = 0 s
[2025-07-26 15:17:35] 2025-07-26 19:17:02,264 | INFO     | ..............................
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | 
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | job summary report
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | --------------------------------------------------
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | PanDA job id: 6745096484
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | task id: 45743349
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | errors: (none)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | pilot state: finished 
[2025-07-26 15:17:35] 2025-07-26 19:17:02,368 | INFO     | transexitcode: 0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | exeerrorcode: 0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | exeerrordiag: 
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | exitcode: 0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | exitmsg: OK
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | cpuconsumptiontime: 51301 s
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | nevents: 400
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | neventsw: 0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | pid: 210402
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | pgrp: 210402
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | corecount: 8
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | event service: False
[2025-07-26 15:17:35] 2025-07-26 19:17:02,369 | INFO     | sizes: {0: 2396647, 1: 2397503, 9: 2397765, 12: 2397793, 6985: 2425075, 6986: 2425074, 6988: 2434256, 6990: 2434312, 6997: 2434506}
[2025-07-26 15:17:35] 2025-07-26 19:17:02,370 | INFO     | --------------------------------------------------
[2025-07-26 15:17:35] 2025-07-26 19:17:02,370 | INFO     | 
[2025-07-26 15:17:35] 2025-07-26 19:17:02,370 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 15:17:35] 2025-07-26 19:17:02,408 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,409 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,409 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,409 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,409 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 15:17:35] 2025-07-26 19:17:02,411 | INFO     | job 6745096484 has completed (purged errors)
[2025-07-26 15:17:35] 2025-07-26 19:17:02,411 | INFO     | overall cleanup function is called
[2025-07-26 15:17:35] 2025-07-26 19:17:02,433 | INFO     | PID=200628 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 15:17:35] 2025-07-26 19:17:02,433 | INFO     | .. there are 22 such processes running
[2025-07-26 15:17:35] 2025-07-26 19:17:03,426 | INFO     | --- collectZombieJob: --- 10, [210402]
[2025-07-26 15:17:35] 2025-07-26 19:17:03,426 | INFO     | zombie collector waiting for pid 210402
[2025-07-26 15:17:35] 2025-07-26 19:17:03,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 15:17:35] 2025-07-26 19:17:03,426 | INFO     | collected zombie processes
[2025-07-26 15:17:35] 2025-07-26 19:17:03,426 | INFO     | will attempt to kill all subprocesses of pid=210402
[2025-07-26 15:17:35] 2025-07-26 19:17:03,873 | INFO     | process IDs to be killed: [210402] (in reverse order)
[2025-07-26 15:17:35] 2025-07-26 19:17:04,006 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 15:17:35] 2025-07-26 19:17:04,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 15:17:35] 2025-07-26 19:17:04,026 | INFO     | did not find any defunct processes belonging to 210402
[2025-07-26 15:17:35] 2025-07-26 19:17:04,045 | INFO     | did not find any defunct processes belonging to 210402
[2025-07-26 15:17:35] 2025-07-26 19:17:04,045 | INFO     | ready for new job
[2025-07-26 15:17:35] 2025-07-26 19:17:04,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 15:17:35] 2025-07-26 19:17:04,047 | INFO     | ***************************************
[2025-07-26 15:17:35] 2025-07-26 19:17:04,047 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 15:17:35] 2025-07-26 19:17:04,047 | INFO     | ***************************************
[2025-07-26 15:17:35] 2025-07-26 19:17:04,047 | INFO     | 
[2025-07-26 15:17:35] 2025-07-26 19:17:04,066 | INFO     | architecture information:
[2025-07-26 15:17:35] 2025-07-26 19:17:04,066 | INFO     | executing command: cat /etc/os-release
[2025-07-26 15:17:35] 2025-07-26 19:17:04,086 | INFO     | cat /etc/os-release:
[2025-07-26 15:17:35] NAME="CentOS Linux"
[2025-07-26 15:17:35] VERSION="7 (Core)"
[2025-07-26 15:17:35] ID="centos"
[2025-07-26 15:17:35] ID_LIKE="rhel fedora"
[2025-07-26 15:17:35] VERSION_ID="7"
[2025-07-26 15:17:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 15:17:35] ANSI_COLOR="0;31"
[2025-07-26 15:17:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 15:17:35] HOME_URL="https://www.centos.org/"
[2025-07-26 15:17:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 15:17:35] 
[2025-07-26 15:17:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 15:17:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 15:17:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 15:17:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 15:17:35] 
[2025-07-26 15:17:35] 2025-07-26 19:17:04,086 | INFO     | ***************************************
[2025-07-26 15:17:35] 2025-07-26 19:17:04,589 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 15:17:35] 2025-07-26 19:17:04,611 | INFO     | sufficient remaining disk space (75861327872 B)
[2025-07-26 15:17:35] 2025-07-26 19:17:04,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 15:17:35] 2025-07-26 19:17:04,612 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 15:17:35] 2025-07-26 19:17:04,612 | INFO     | update_server=False
[2025-07-26 15:17:35] 2025-07-26 19:17:04,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 15:17:35] 2025-07-26 19:17:04,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:17:35] 2025-07-26 19:17:04,613 | INFO     | aborting loop
[2025-07-26 15:17:35] 2025-07-26 19:17:04,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 15:17:35] 2025-07-26 19:17:04,617 | INFO     | all job control threads have been joined
[2025-07-26 15:17:35] 2025-07-26 19:17:04,777 | INFO     | all data control threads have been joined
[2025-07-26 15:17:35] 2025-07-26 19:17:05,618 | INFO     | [job] job monitor thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:05,619 | INFO     | [job] retrieve thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:05,624 | INFO     | [job] control thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:05,637 | INFO     | [data] copytool_in thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:05,784 | INFO     | [data] control thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:05,827 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:06,020 | INFO     | all payload control threads have been joined
[2025-07-26 15:17:35] 2025-07-26 19:17:06,144 | INFO     | [job] validate thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:06,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:06,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 15:17:35] 2025-07-26 19:17:06,619 | INFO     | [data] copytool_out thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:06,801 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:06,950 | INFO     | [payload] failed_post thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:06,955 | INFO     | [payload] validate_post thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:06,986 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:07,025 | INFO     | [payload] control thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:07,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:17:35] 2025-07-26 19:17:08,383 | INFO     | [job] queue monitor thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:10,575 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 15:17:35] 2025-07-26 19:17:10,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706147563328)>', '<ExcThread(monitor, started 139705790215936)>']
[2025-07-26 15:17:35] 2025-07-26 19:17:15,612 | INFO     | all workflow threads have been joined
[2025-07-26 15:17:35] 2025-07-26 19:17:15,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 15:17:35] 2025-07-26 19:17:15,613 | INFO     | traces error code: 0
[2025-07-26 15:17:35] 2025-07-26 19:17:15,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 15:17:35] 2025-07-26 19:17:34,923 | INFO     | PID=200628 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 15:17:35] 2025-07-26 19:17:34,924 | INFO     | .. there are 22 such processes running
[2025-07-26 15:17:35] 2025-07-26 19:17:34,924 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 15:17:35] 2025-07-26 19:17:34,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 15:17:35] 2025-07-26 19:17:34,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 15:17:35] 2025-07-26 19:17:34,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 15:17:35] 2025-07-26 19:17:34,924 | INFO     | [monitor] control thread has ended
[2025-07-26 15:17:35] 2025-07-26 19:17:35,111 [wrapper] ==== pilot stdout END ====
[2025-07-26 15:17:35] 2025-07-26 19:17:35,120 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 15:17:35] 2025-07-26 19:17:35,127 [wrapper] pilotpid: 200628
[2025-07-26 15:17:35] 2025-07-26 19:17:35,131 [wrapper] Pilot exit status: 0
[2025-07-26 15:17:35] 2025-07-26 19:17:35,153 [wrapper] pandaids: 6745096484
[2025-07-26 15:17:35] 2025-07-26 19:17:35,239 [wrapper] cleanup supervisor_pilot  725396 200629
[2025-07-26 15:17:35] 2025-07-26 19:17:35,243 [wrapper] Test setup, not cleaning
[2025-07-26 15:17:35] 2025-07-26 19:17:35,246 [wrapper] apfmon messages muted
[2025-07-26 15:17:35] 2025-07-26 19:17:35,250 [wrapper] ==== wrapper stdout END ====
[2025-07-26 15:17:35] 2025-07-26 19:17:35,254 [wrapper] ==== wrapper stderr END ====
[2025-07-26 15:17:35]  *** Error codes and diagnostics ***
[2025-07-26 15:17:35]     "exeErrorCode": 0,
[2025-07-26 15:17:35]     "exeErrorDiag": "",
[2025-07-26 15:17:35]     "pilotErrorCode": 0,
[2025-07-26 15:17:35]     "pilotErrorDiag": "",
[2025-07-26 15:17:35]  *** Listing of results directory ***
[2025-07-26 15:17:35] total 350676
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 00:48 pilot3.tar.gz
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 00:52 queuedata.json
[2025-07-26 15:17:35] -rwx------. 1 boincer umatlas     36292 Jul 26 00:53 runpilot2-wrapper.sh
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas       100 Jul 26 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 15:17:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 13:19 run_atlas
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas       105 Jul 26 13:19 job.xml
[2025-07-26 15:17:35] -rw-r--r--. 2 boincer umatlas 142689812 Jul 26 13:19 EVNT.45743347._001830.pool.root.1
[2025-07-26 15:17:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 13:19 start_atlas.sh
[2025-07-26 15:17:35] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 13:19 shared
[2025-07-26 15:17:35] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 13:19 input.tar.gz
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas         0 Jul 26 13:19 boinc_lockfile
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 13:19 pandaJob.out
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas    980125 Jul 26 13:20 agis_schedconf.cvmfs.json
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas   1593052 Jul 26 13:20 agis_ddmendpoints.agis.ALL.json
[2025-07-26 15:17:35] drwx------. 4 boincer umatlas      4096 Jul 26 13:20 pilot3
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas      6855 Jul 26 15:10 init_data.xml
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas 210564231 Jul 26 15:16 HITS.45743349._032511.pool.root.1
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas       529 Jul 26 15:16 boinc_task_state.xml
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas      1039 Jul 26 15:16 memory_monitor_summary.json
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas    324567 Jul 26 15:16 log.45743349._032511.job.log.tgz.1
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas      7828 Jul 26 15:17 heartbeat.json
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas        95 Jul 26 15:17 pilot_heartbeat.json
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas        27 Jul 26 15:17 wrapper_checkpoint.txt
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 15:17 boinc_mmap_file
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas       822 Jul 26 15:17 pilotlog.txt
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas    654976 Jul 26 15:17 log.45743349._032511.job.log.1
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas       357 Jul 26 15:17 output.list
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas       620 Jul 26 15:17 runtime_log
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas   1003520 Jul 26 15:17 result.tar.gz
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas      8665 Jul 26 15:17 runtime_log.err
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas       654 Jul 26 15:17 mZxKDm45lz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmw8zKDmL7jXnn.diag
[2025-07-26 15:17:35] -rw-r--r--. 1 boincer umatlas     21014 Jul 26 15:17 stderr.txt
[2025-07-26 15:17:35] HITS file was successfully produced:
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas 210564231 Jul 26 15:16 shared/HITS.pool.root.1
[2025-07-26 15:17:35]  *** Contents of shared directory: ***
[2025-07-26 15:17:35] total 346512
[2025-07-26 15:17:35] -rw-r--r--. 2 boincer umatlas 142689812 Jul 26 13:19 ATLAS.root_0
[2025-07-26 15:17:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 13:19 start_atlas.sh
[2025-07-26 15:17:35] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 13:19 input.tar.gz
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas 210564231 Jul 26 15:16 HITS.pool.root.1
[2025-07-26 15:17:35] -rw-------. 1 boincer umatlas   1003520 Jul 26 15:17 result.tar.gz
15:17:36 (193922): run_atlas exited; CPU time 51598.291357
15:17:36 (193922): called boinc_finish(0)

</stderr_txt>
]]>

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