Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:05:48 (22447): wrapper (7.7.26015): starting
08:05:48 (22447): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 08:05:48] Arguments: --nthreads 8
[2025-07-27 08:05:48] Threads: 8
[2025-07-27 08:05:48] Checking for CVMFS
[2025-07-27 08:05:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 08:05:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 08:05:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 08:05:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 08:05:50] 2.11.2.0 6428 109134 139284 148802 2 109 21857575 25165825 4353 130560 0 84303542 99.873 52650771 3601 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 08:05:50] CVMFS is ok
[2025-07-27 08:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 08:05:50] Checking for apptainer binary...
[2025-07-27 08:05:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 08:05:50] Running /usr/bin/apptainer --version
[2025-07-27 08:05:50] apptainer version 1.3.2-1.el7
[2025-07-27 08:05:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 08:05:51] cg-vwn335.simple-grid.lan
[2025-07-27 08:05:51] apptainer works
[2025-07-27 08:05:51] Set ATHENA_PROC_NUMBER=8
[2025-07-27 08:05:51] Set ATHENA_CORE_NUMBER=8
[2025-07-27 08:05:51] Starting ATLAS job with PandaID=6745229480
[2025-07-27 08:05:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 14:38:02]  *** The last 200 lines of the pilot log: ***
[2025-07-27 14:38:02] 2025-07-27 10:35:20,826 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 14:38:02] 2025-07-27 10:35:20,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 14:38:02] 2025-07-27 10:35:20,832 | INFO     | fitting pss+swap vs Time
[2025-07-27 14:38:02] 2025-07-27 10:35:20,832 | INFO     | sum of square deviations: 5640782972.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,835 | INFO     | sum of deviations: 35511413031.99999
[2025-07-27 14:38:02] 2025-07-27 10:35:20,835 | INFO     | mean x: 1753604421.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,835 | INFO     | mean y: 2475891.2205323195
[2025-07-27 14:38:02] 2025-07-27 10:35:20,835 | INFO     | -- intersect: -11037298409.259718
[2025-07-27 14:38:02] 2025-07-27 10:35:20,835 | INFO     | intersect: -11037298409.259718
[2025-07-27 14:38:02] 2025-07-27 10:35:20,836 | INFO     | chi2: 2.6259118207271186
[2025-07-27 14:38:02] 2025-07-27 10:35:20,836 | INFO     | sum of square deviations: 5325139844.5
[2025-07-27 14:38:02] 2025-07-27 10:35:20,846 | INFO     | sum of deviations: 54994299290.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,847 | INFO     | mean x: 1753604268.5
[2025-07-27 14:38:02] 2025-07-27 10:35:20,847 | INFO     | mean y: 2485154.80620155
[2025-07-27 14:38:02] 2025-07-27 10:35:20,847 | INFO     | -- intersect: -18107506468.74064
[2025-07-27 14:38:02] 2025-07-27 10:35:20,847 | INFO     | intersect: -18107506468.74064
[2025-07-27 14:38:02] 2025-07-27 10:35:20,847 | INFO     | chi2: 1.6321488968585185
[2025-07-27 14:38:02] 2025-07-27 10:35:20,848 | INFO     | current chi2=1.6321488968585185 (change=37.84448952263087 %)
[2025-07-27 14:38:02] 2025-07-27 10:35:20,848 | INFO     | sum of square deviations: 5021496942.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,850 | INFO     | sum of deviations: 53799295930.999985
[2025-07-27 14:38:02] 2025-07-27 10:35:20,851 | INFO     | mean x: 1753604116.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,851 | INFO     | mean y: 2484554.5928853755
[2025-07-27 14:38:02] 2025-07-27 10:35:20,851 | INFO     | -- intersect: -18785272935.293808
[2025-07-27 14:38:02] 2025-07-27 10:35:20,851 | INFO     | intersect: -18785272935.293808
[2025-07-27 14:38:02] 2025-07-27 10:35:20,851 | INFO     | chi2: 1.6324679165197444
[2025-07-27 14:38:02] 2025-07-27 10:35:20,852 | INFO     | current chi2=1.6324679165197444 (change=-0.0195459900649979 %)
[2025-07-27 14:38:02] 2025-07-27 10:35:20,852 | INFO     | right removable region: 252
[2025-07-27 14:38:02] 2025-07-27 10:35:20,852 | INFO     | sum of square deviations: 5325139844.5
[2025-07-27 14:38:02] 2025-07-27 10:35:20,855 | INFO     | sum of deviations: -10972176353.5
[2025-07-27 14:38:02] 2025-07-27 10:35:20,855 | INFO     | mean x: 1753604573.5
[2025-07-27 14:38:02] 2025-07-27 10:35:20,855 | INFO     | mean y: 2498194.895348837
[2025-07-27 14:38:02] 2025-07-27 10:35:20,855 | INFO     | -- intersect: 3615710091.033404
[2025-07-27 14:38:02] 2025-07-27 10:35:20,855 | INFO     | intersect: 3615710091.033404
[2025-07-27 14:38:02] 2025-07-27 10:35:20,856 | INFO     | chi2: 1.0379951691377798
[2025-07-27 14:38:02] 2025-07-27 10:35:20,856 | INFO     | current chi2=1.0379951691377798 (change=60.471057674345 %)
[2025-07-27 14:38:02] 2025-07-27 10:35:20,856 | INFO     | sum of square deviations: 5021496942.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,859 | INFO     | sum of deviations: -9526517925.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,859 | INFO     | mean x: 1753604726.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,859 | INFO     | mean y: 2497441.3636363638
[2025-07-27 14:38:02] 2025-07-27 10:35:20,859 | INFO     | -- intersect: 3329343409.5203
[2025-07-27 14:38:02] 2025-07-27 10:35:20,859 | INFO     | intersect: 3329343409.5203
[2025-07-27 14:38:02] 2025-07-27 10:35:20,860 | INFO     | chi2: 1.0205681542203766
[2025-07-27 14:38:02] 2025-07-27 10:35:20,860 | INFO     | current chi2=1.0205681542203766 (change=1.6789109849017005 %)
[2025-07-27 14:38:02] 2025-07-27 10:35:20,860 | INFO     | left removable region: 20
[2025-07-27 14:38:02] 2025-07-27 10:35:20,861 | INFO     | sum of square deviations: 3871990738.0
[2025-07-27 14:38:02] 2025-07-27 10:35:20,862 | INFO     | sum of deviations: 6000975649.999999
[2025-07-27 14:38:02] 2025-07-27 10:35:20,863 | INFO     | mean x: 1753604695.5
[2025-07-27 14:38:02] 2025-07-27 10:35:20,863 | INFO     | mean y: 2509455.2586206896
[2025-07-27 14:38:02] 2025-07-27 10:35:20,863 | INFO     | -- intersect: -2715301559.665652
[2025-07-27 14:38:02] 2025-07-27 10:35:20,863 | INFO     | intersect: -2715301559.665652
[2025-07-27 14:38:02] 2025-07-27 10:35:20,863 | INFO     | chi2: 0.0008786382280247335
[2025-07-27 14:38:02] 2025-07-27 10:35:20,864 | INFO     | -- intersect: -2715301559.665652
[2025-07-27 14:38:02] 2025-07-27 10:35:20,864 | INFO     | current memory leak: 1.55 B/s (using 232 data points, chi2=0.00)
[2025-07-27 14:38:02] 2025-07-27 10:35:20,865 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 14:38:02] 2025-07-27 10:35:20,865 | INFO     | ..............................
[2025-07-27 14:38:02] 2025-07-27 10:35:20,865 | INFO     | . Timing measurements:
[2025-07-27 14:38:02] 2025-07-27 10:35:20,865 | INFO     | . get job = 0 s
[2025-07-27 14:38:02] 2025-07-27 10:35:20,865 | INFO     | . initial setup = 2 s
[2025-07-27 14:38:02] 2025-07-27 10:35:20,866 | INFO     | . payload setup = 15 s
[2025-07-27 14:38:02] 2025-07-27 10:35:20,866 | INFO     | . stage-in = 0 s
[2025-07-27 14:38:02] 2025-07-27 10:35:20,866 | INFO     | . payload execution = 16003 s
[2025-07-27 14:38:02] 2025-07-27 10:35:20,866 | INFO     | . stage-out = 3 s
[2025-07-27 14:38:02] 2025-07-27 10:35:20,866 | INFO     | . log creation = 0 s
[2025-07-27 14:38:02] 2025-07-27 10:35:20,866 | INFO     | ..............................
[2025-07-27 14:38:02] 2025-07-27 10:35:21,252 | INFO     | 
[2025-07-27 14:38:02] 2025-07-27 10:35:21,253 | INFO     | job summary report
[2025-07-27 14:38:02] 2025-07-27 10:35:21,253 | INFO     | --------------------------------------------------
[2025-07-27 14:38:02] 2025-07-27 10:35:21,253 | INFO     | PanDA job id: 6745229480
[2025-07-27 14:38:02] 2025-07-27 10:35:21,253 | INFO     | task id: 45743349
[2025-07-27 14:38:02] 2025-07-27 10:35:21,253 | INFO     | errors: (none)
[2025-07-27 14:38:02] 2025-07-27 10:35:21,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 14:38:02] 2025-07-27 10:35:21,253 | INFO     | pilot state: finished 
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | transexitcode: 0
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | exeerrorcode: 0
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | exeerrordiag: 
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | exitcode: 0
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | exitmsg: OK
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | cpuconsumptiontime: 62136 s
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | nevents: 400
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | neventsw: 0
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | pid: 621
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | pgrp: 621
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | corecount: 8
[2025-07-27 14:38:02] 2025-07-27 10:35:21,254 | INFO     | event service: False
[2025-07-27 14:38:02] 2025-07-27 10:35:21,255 | INFO     | sizes: {0: 2397248, 1: 2397503, 2: 2397503, 10: 2397793, 12: 2397821, 16023: 2428944, 16026: 2437942, 16028: 2437998, 16128: 2438192}
[2025-07-27 14:38:02] 2025-07-27 10:35:21,255 | INFO     | --------------------------------------------------
[2025-07-27 14:38:02] 2025-07-27 10:35:21,255 | INFO     | 
[2025-07-27 14:38:02] 2025-07-27 10:35:21,255 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-27 14:38:02] 2025-07-27 10:35:21,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,757 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 14:38:02] 2025-07-27 10:35:21,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,759 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 14:38:02] 2025-07-27 10:35:21,759 | INFO     | job 6745229480 has completed (purged errors)
[2025-07-27 14:38:02] 2025-07-27 10:35:21,759 | INFO     | overall cleanup function is called
[2025-07-27 14:38:02] 2025-07-27 10:35:22,768 | INFO     | --- collectZombieJob: --- 10, [621]
[2025-07-27 14:38:02] 2025-07-27 10:35:22,769 | INFO     | zombie collector waiting for pid 621
[2025-07-27 14:38:02] 2025-07-27 10:35:22,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 14:38:02] 2025-07-27 10:35:22,769 | INFO     | collected zombie processes
[2025-07-27 14:38:02] 2025-07-27 10:35:22,769 | INFO     | will attempt to kill all subprocesses of pid=621
[2025-07-27 14:38:02] 2025-07-27 10:35:22,926 | INFO     | process IDs to be killed: [621] (in reverse order)
[2025-07-27 14:38:02] 2025-07-27 10:35:23,531 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 14:38:02] 2025-07-27 10:35:23,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 14:38:02] 2025-07-27 10:35:23,535 | INFO     | did not find any defunct processes belonging to 621
[2025-07-27 14:38:02] 2025-07-27 10:35:23,538 | INFO     | did not find any defunct processes belonging to 621
[2025-07-27 14:38:02] 2025-07-27 10:35:23,539 | INFO     | ready for new job
[2025-07-27 14:38:02] 2025-07-27 10:35:23,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 14:38:02] 2025-07-27 10:35:23,541 | INFO     | ***************************************
[2025-07-27 14:38:02] 2025-07-27 10:35:23,542 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 14:38:02] 2025-07-27 10:35:23,542 | INFO     | ***************************************
[2025-07-27 14:38:02] 2025-07-27 10:35:23,542 | INFO     | 
[2025-07-27 14:38:02] 2025-07-27 10:35:23,543 | INFO     | pilot is running in a VM
[2025-07-27 14:38:02] 2025-07-27 10:35:23,543 | INFO     | architecture information:
[2025-07-27 14:38:02] 2025-07-27 10:35:23,553 | INFO     | executing command: cat /etc/os-release
[2025-07-27 14:38:02] 2025-07-27 10:35:23,842 | INFO     | cat /etc/os-release:
[2025-07-27 14:38:02] NAME="CentOS Linux"
[2025-07-27 14:38:02] VERSION="7 (Core)"
[2025-07-27 14:38:02] ID="centos"
[2025-07-27 14:38:02] ID_LIKE="rhel fedora"
[2025-07-27 14:38:02] VERSION_ID="7"
[2025-07-27 14:38:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 14:38:02] ANSI_COLOR="0;31"
[2025-07-27 14:38:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 14:38:02] HOME_URL="https://www.centos.org/"
[2025-07-27 14:38:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 14:38:02] 
[2025-07-27 14:38:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 14:38:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 14:38:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 14:38:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 14:38:02] 
[2025-07-27 14:38:02] 2025-07-27 10:35:23,842 | INFO     | ***************************************
[2025-07-27 14:38:02] 2025-07-27 10:35:24,346 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-27 14:38:02] 2025-07-27 10:35:24,637 | INFO     | sufficient remaining disk space (496606642176 B)
[2025-07-27 14:38:02] 2025-07-27 10:35:24,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 14:38:02] 2025-07-27 10:35:24,638 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 14:38:02] 2025-07-27 10:35:24,638 | INFO     | update_server=False
[2025-07-27 14:38:02] 2025-07-27 10:35:24,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 14:38:02] 2025-07-27 10:35:24,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:38:02] 2025-07-27 10:35:24,715 | INFO     | aborting loop
[2025-07-27 14:38:02] 2025-07-27 10:35:24,942 | INFO     | all job control threads have been joined
[2025-07-27 14:38:02] 2025-07-27 10:35:25,275 | INFO     | all payload control threads have been joined
[2025-07-27 14:38:02] 2025-07-27 10:35:25,365 | INFO     | all data control threads have been joined
[2025-07-27 14:38:02] 2025-07-27 10:35:25,644 | INFO     | [job] retrieve thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:25,668 | INFO     | [data] copytool_in thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:25,683 | INFO     | [job] validate thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:25,721 | INFO     | [job] job monitor thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:25,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 14:38:02] 2025-07-27 10:35:25,882 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:25,949 | INFO     | [job] control thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:26,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:38:02] 2025-07-27 10:35:26,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:26,281 | INFO     | [payload] control thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:26,371 | INFO     | [data] control thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:26,419 | INFO     | [payload] failed_post thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:26,528 | INFO     | [payload] validate_post thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:26,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 14:38:02] 2025-07-27 10:35:27,001 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:27,009 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:27,030 | INFO     | [job] queue monitor thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:27,767 | INFO     | [data] copytool_out thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:30,971 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 14:38:02] 2025-07-27 10:35:32,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298060158784)>', '<ExcThread(monitor, started 140297614894848)>']
[2025-07-27 14:38:02] 2025-07-27 10:35:37,078 | INFO     | all workflow threads have been joined
[2025-07-27 14:38:02] 2025-07-27 10:35:37,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 14:38:02] 2025-07-27 10:35:37,079 | INFO     | traces error code: 0
[2025-07-27 14:38:02] 2025-07-27 10:35:37,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 14:38:02] 2025-07-27 10:35:53,004 | INFO     | PID=26478 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 14:38:02] 2025-07-27 10:35:53,004 | INFO     | .. there are 9 such processes running
[2025-07-27 14:38:02] 2025-07-27 10:35:53,005 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 14:38:02] 2025-07-27 10:35:53,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 14:38:02] 2025-07-27 10:35:53,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 14:38:02] 2025-07-27 10:35:53,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 14:38:02] 2025-07-27 10:35:53,006 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 14:38:02] 2025-07-27 10:35:53,006 | INFO     | [monitor] control thread has ended
[2025-07-27 14:38:02] 2025-07-27 10:35:53,491 [wrapper] ==== pilot stdout END ====
[2025-07-27 14:38:02] 2025-07-27 10:35:53,568 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 14:38:02] 2025-07-27 10:35:53,670 [wrapper] pilotpid: 26478
[2025-07-27 14:38:02] 2025-07-27 10:35:53,802 [wrapper] Pilot exit status: 0
[2025-07-27 14:38:02] 2025-07-27 10:35:54,243 [wrapper] pandaids: 6745229480
[2025-07-27 14:38:02] 2025-07-27 10:35:55,353 [wrapper] cleanup supervisor_pilot 10151 26479
[2025-07-27 14:38:02] 2025-07-27 10:35:55,467 [wrapper] Test setup, not cleaning
[2025-07-27 14:38:02] 2025-07-27 10:35:55,607 [wrapper] apfmon messages muted
[2025-07-27 14:38:02] 2025-07-27 10:35:55,704 [wrapper] ==== wrapper stdout END ====
[2025-07-27 14:38:02] 2025-07-27 10:35:55,801 [wrapper] ==== wrapper stderr END ====
[2025-07-27 14:38:02]  *** Error codes and diagnostics ***
[2025-07-27 14:38:02]     "exeErrorCode": 0,
[2025-07-27 14:38:02]     "exeErrorDiag": "",
[2025-07-27 14:38:02]     "pilotErrorCode": 0,
[2025-07-27 14:38:02]     "pilotErrorDiag": "",
[2025-07-27 14:38:02]  *** Listing of results directory ***
[2025-07-27 14:38:02] total 432664
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc      5112 Jul 26 16:39 queuedata.json
[2025-07-27 14:38:02] -rwx------. 1 boinc boinc     36292 Jul 26 16:40 runpilot2-wrapper.sh
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc    530466 Jul 26 16:40 pilot3.tar.gz
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc       100 Jul 27 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 14:38:02] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 08:05 run_atlas
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc       105 Jul 27 08:05 job.xml
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc      6391 Jul 27 08:05 init_data.xml
[2025-07-27 14:38:02] -rw-r--r--. 2 boinc boinc 229431563 Jul 27 08:05 EVNT.45743347._002250.pool.root.1
[2025-07-27 14:38:02] -rw-r--r--. 2 boinc boinc     15095 Jul 27 08:05 start_atlas.sh
[2025-07-27 14:38:02] drwxrwx--x. 2 boinc boinc        68 Jul 27 08:05 shared
[2025-07-27 14:38:02] -rw-r--r--. 2 boinc boinc    542891 Jul 27 08:05 input.tar.gz
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc         0 Jul 27 08:05 boinc_lockfile
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc      2563 Jul 27 08:05 pandaJob.out
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc    980109 Jul 27 08:06 agis_schedconf.cvmfs.json
[2025-07-27 14:38:02] drwx------. 4 boinc boinc      4096 Jul 27 08:06 pilot3
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc 206175307 Jul 27 12:32 HITS.45743349._039445.pool.root.1
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc       531 Jul 27 12:32 boinc_task_state.xml
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc      1021 Jul 27 12:33 memory_monitor_summary.json
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc   1593052 Jul 27 12:33 agis_ddmendpoints.agis.ALL.json
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc    396308 Jul 27 12:33 log.45743349._039445.job.log.tgz.1
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc      7779 Jul 27 12:35 heartbeat.json
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc        95 Jul 27 12:35 pilot_heartbeat.json
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc       890 Jul 27 12:35 pilotlog.txt
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc   1392231 Jul 27 12:35 log.45743349._039445.job.log.1
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc       357 Jul 27 12:35 output.list
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc       620 Jul 27 12:35 runtime_log
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc   1812480 Jul 27 12:35 result.tar.gz
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc      8660 Jul 27 12:35 runtime_log.err
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc       657 Jul 27 12:35 58MMDmXFvz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBNSLDmr3Fn2n.diag
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc      8192 Jul 27 14:38 boinc_mmap_file
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc        28 Jul 27 14:38 wrapper_checkpoint.txt
[2025-07-27 14:38:02] -rw-r--r--. 1 boinc boinc     20557 Jul 27 14:38 stderr.txt
[2025-07-27 14:38:02] HITS file was successfully produced:
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc 206175307 Jul 27 12:32 shared/HITS.pool.root.1
[2025-07-27 14:38:02]  *** Contents of shared directory: ***
[2025-07-27 14:38:02] total 427720
[2025-07-27 14:38:02] -rw-r--r--. 2 boinc boinc 229431563 Jul 27 08:05 ATLAS.root_0
[2025-07-27 14:38:02] -rw-r--r--. 2 boinc boinc     15095 Jul 27 08:05 start_atlas.sh
[2025-07-27 14:38:02] -rw-r--r--. 2 boinc boinc    542891 Jul 27 08:05 input.tar.gz
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc 206175307 Jul 27 12:32 HITS.pool.root.1
[2025-07-27 14:38:02] -rw-------. 1 boinc boinc   1812480 Jul 27 12:35 result.tar.gz
14:38:04 (22447): run_atlas exited; CPU time 62348.455218
14:38:04 (22447): called boinc_finish(0)

</stderr_txt>
]]>

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