Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
04:16:28 (3079749): wrapper (7.7.26015): starting
04:16:28 (3079749): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 04:16:28] Arguments: --nthreads 6
[2025-07-28 04:16:28] Threads: 6
[2025-07-28 04:16:28] Checking for CVMFS
[2025-07-28 04:16:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 04:16:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 04:16:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 04:16:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 04:16:28] 2.12.7.0 1004224 8032 63480 148832 1 56 3774810 6144000 0 130560 0 5799055 99.989 292757 3109 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-28 04:16:28] CVMFS is ok
[2025-07-28 04:16:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 04:16:28] Checking for apptainer binary...
[2025-07-28 04:16:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 04:16:28] Running /usr/bin/apptainer --version
[2025-07-28 04:16:28] apptainer version 1.4.0
[2025-07-28 04:16:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 04:16:29] Beta
[2025-07-28 04:16:29] apptainer works
[2025-07-28 04:16:29] Set ATHENA_PROC_NUMBER=6
[2025-07-28 04:16:29] Set ATHENA_CORE_NUMBER=6
[2025-07-28 04:16:29] Starting ATLAS job with PandaID=6745101913
[2025-07-28 04:16:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 05:37:29]  *** The last 200 lines of the pilot log: ***
[2025-07-28 05:37:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 05:37:29]  is_altstaged=None
[2025-07-28 05:37:29]  is_tar=False
[2025-07-28 05:37:29]  lfn=log.45743349._035211.job.log.tgz.1
[2025-07-28 05:37:29]  mtime=0
[2025-07-28 05:37:29]  protocol_id=None
[2025-07-28 05:37:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 05:37:29]  replicas=None
[2025-07-28 05:37:29]  scope=mc23_13p6TeV
[2025-07-28 05:37:29]  status=None
[2025-07-28 05:37:29]  status_code=0
[2025-07-28 05:37:29]  storage_token=
[2025-07-28 05:37:29]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745101913/log.45743349._035211.job.log.tgz.1
[2025-07-28 05:37:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/a5/log.45743349._035211.job.log.tgz.1
[2025-07-28 05:37:29]  workdir=None
[2025-07-28 05:37:29] ]
[2025-07-28 05:37:29] 2025-07-28 03:36:50,372 | INFO     | transferring file log.45743349._035211.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745101913/log.45743349._035211.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 05:37:29] 2025-07-28 03:36:50,372 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745101913/log.45743349._035211.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._035211.job
[2025-07-28 05:37:29] 2025-07-28 03:36:50,382 | INFO     | adding to output.list: log.45743349._035211.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/a5/log.45743349._035211.job.log.tg
[2025-07-28 05:37:29] 2025-07-28 03:36:50,382 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 05:37:29] 2025-07-28 03:36:50,382 | INFO     | summary of transferred files:
[2025-07-28 05:37:29] 2025-07-28 03:36:50,382 | INFO     |  -- lfn=log.45743349._035211.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 05:37:29] 2025-07-28 03:36:50,382 | INFO     | stage-out finished correctly
[2025-07-28 05:37:29] 2025-07-28 03:36:53,541 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 05:37:29] 2025-07-28 03:36:53,582 | INFO     | job 6745101913 has state=finished
[2025-07-28 05:37:29] 2025-07-28 03:36:53,582 | INFO     | preparing for final server update for job 6745101913 in state='finished'
[2025-07-28 05:37:29] 2025-07-28 03:36:53,583 | INFO     | this job has now completed (state=finished)
[2025-07-28 05:37:29] 2025-07-28 03:36:53,583 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 05:37:29] 2025-07-28 03:36:53,583 | INFO     | log transfer has been attempted: DONE
[2025-07-28 05:37:29] 2025-07-28 03:36:53,583 | INFO     | job 6745101913 has finished - writing final server update
[2025-07-28 05:37:29] 2025-07-28 03:36:53,583 | INFO     | total number of processed events: 400 (read)
[2025-07-28 05:37:29] 2025-07-28 03:36:53,584 | INFO     | executing command: lscpu
[2025-07-28 05:37:29] 2025-07-28 03:36:53,595 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 05:37:29] 2025-07-28 03:36:55,979 | WARNING  | process 3089846 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 05:37:29] 2025-07-28 03:36:55,979 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745101913/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 05:37:29] 2025-07-28 03:36:56,026 | INFO     | number of running child processes to parent process 3089846: 1
[2025-07-28 05:37:29] 2025-07-28 03:36:56,026 | INFO     | maximum number of monitored processes: 6
[2025-07-28 05:37:29] 2025-07-28 03:36:57,284 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 05:37:29] 2025-07-28 03:36:57,285 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3724.7419999999997
[2025-07-28 05:37:29] 2025-07-28 03:36:57,285 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745101913/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 05:37:29] 2025-07-28 03:36:57,286 | INFO     | extracted standard info from prmon json
[2025-07-28 05:37:29] 2025-07-28 03:36:57,286 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 05:37:29] 2025-07-28 03:36:57,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 05:37:29] 2025-07-28 03:36:57,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 05:37:29] 2025-07-28 03:36:57,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | fitting pss+swap vs Time
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | sum of square deviations: 115715658.0
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | sum of deviations: -9575081214.5
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | mean x: 1753671483.5
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | mean y: 2686272.625
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | -- intersect: 145113098884.7643
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | intersect: 145113098884.7643
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | chi2: 0.04063872281476424
[2025-07-28 05:37:29] 2025-07-28 03:36:57,287 | INFO     | -- intersect: 145113098884.7643
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | current memory leak: -82.75 B/s (using 72 data points, chi2=0.04)
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | could have reported an average CPU frequency of 3648 MHz (6 samples)
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | ..............................
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | . Timing measurements:
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | . get job = 0 s
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | . initial setup = 1 s
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | . payload setup = 3 s
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | . stage-in = 0 s
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | . payload execution = 4796 s
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | . stage-out = 0 s
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | . log creation = 0 s
[2025-07-28 05:37:29] 2025-07-28 03:36:57,288 | INFO     | ..............................
[2025-07-28 05:37:29] 2025-07-28 03:36:57,333 | INFO     | 
[2025-07-28 05:37:29] 2025-07-28 03:36:57,333 | INFO     | job summary report
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | --------------------------------------------------
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | PanDA job id: 6745101913
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | task id: 45743349
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | errors: (none)
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | pilot state: finished 
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | transexitcode: 0
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | exeerrorcode: 0
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | exeerrordiag: 
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | exitcode: 0
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | exitmsg: OK
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | cpuconsumptiontime: 27788 s
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | nevents: 400
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | neventsw: 0
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | pid: 3089846
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | pgrp: 3089846
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | corecount: 6
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | event service: False
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | sizes: {0: 2397302, 1: 2397501, 2: 2397763, 11: 2397791, 4804: 2433112, 4807: 2433112, 4811: 2433434}
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | --------------------------------------------------
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | 
[2025-07-28 05:37:29] 2025-07-28 03:36:57,334 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | job 6745101913 has completed (purged errors)
[2025-07-28 05:37:29] 2025-07-28 03:36:57,344 | INFO     | overall cleanup function is called
[2025-07-28 05:37:29] 2025-07-28 03:36:58,350 | INFO     | --- collectZombieJob: --- 10, [3089846]
[2025-07-28 05:37:29] 2025-07-28 03:36:58,351 | INFO     | zombie collector waiting for pid 3089846
[2025-07-28 05:37:29] 2025-07-28 03:36:58,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 05:37:29] 2025-07-28 03:36:58,351 | INFO     | collected zombie processes
[2025-07-28 05:37:29] 2025-07-28 03:36:58,352 | INFO     | will attempt to kill all subprocesses of pid=3089846
[2025-07-28 05:37:29] 2025-07-28 03:36:58,407 | INFO     | process IDs to be killed: [3089846] (in reverse order)
[2025-07-28 05:37:29] 2025-07-28 03:36:58,429 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 05:37:29] 2025-07-28 03:36:58,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 05:37:29] 2025-07-28 03:36:58,430 | INFO     | did not find any defunct processes belonging to 3089846
[2025-07-28 05:37:29] 2025-07-28 03:36:58,431 | INFO     | did not find any defunct processes belonging to 3089846
[2025-07-28 05:37:29] 2025-07-28 03:36:58,432 | INFO     | ready for new job
[2025-07-28 05:37:29] 2025-07-28 03:36:58,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 05:37:29] 2025-07-28 03:36:58,432 | INFO     | ***************************************
[2025-07-28 05:37:29] 2025-07-28 03:36:58,433 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 05:37:29] 2025-07-28 03:36:58,433 | INFO     | ***************************************
[2025-07-28 05:37:29] 2025-07-28 03:36:58,433 | INFO     | 
[2025-07-28 05:37:29] 2025-07-28 03:36:58,433 | INFO     | architecture information:
[2025-07-28 05:37:29] 2025-07-28 03:36:58,433 | INFO     | executing command: cat /etc/os-release
[2025-07-28 05:37:29] 2025-07-28 03:36:58,439 | INFO     | cat /etc/os-release:
[2025-07-28 05:37:29] NAME="CentOS Linux"
[2025-07-28 05:37:29] VERSION="7 (Core)"
[2025-07-28 05:37:29] ID="centos"
[2025-07-28 05:37:29] ID_LIKE="rhel fedora"
[2025-07-28 05:37:29] VERSION_ID="7"
[2025-07-28 05:37:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 05:37:29] ANSI_COLOR="0;31"
[2025-07-28 05:37:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 05:37:29] HOME_URL="https://www.centos.org/"
[2025-07-28 05:37:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 05:37:29] 
[2025-07-28 05:37:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 05:37:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 05:37:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 05:37:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 05:37:29] 
[2025-07-28 05:37:29] 2025-07-28 03:36:58,440 | INFO     | ***************************************
[2025-07-28 05:37:29] 2025-07-28 03:36:58,943 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 05:37:29] 2025-07-28 03:36:58,953 | INFO     | sufficient remaining disk space (266951720960 B)
[2025-07-28 05:37:29] 2025-07-28 03:36:58,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 05:37:29] 2025-07-28 03:36:58,954 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 05:37:29] 2025-07-28 03:36:58,954 | INFO     | update_server=False
[2025-07-28 05:37:29] 2025-07-28 03:36:58,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 05:37:29] 2025-07-28 03:36:58,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 05:37:29] 2025-07-28 03:36:58,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 05:37:29] 2025-07-28 03:36:59,462 | INFO     | all data control threads have been joined
[2025-07-28 05:37:29] 2025-07-28 03:36:59,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 05:37:29] 2025-07-28 03:36:59,535 | INFO     | aborting loop
[2025-07-28 05:37:29] 2025-07-28 03:36:59,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 05:37:29] 2025-07-28 03:36:59,960 | INFO     | [job] retrieve thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:36:59,961 | INFO     | [job] queue monitor thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:00,024 | INFO     | all payload control threads have been joined
[2025-07-28 05:37:29] 2025-07-28 03:37:00,025 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:00,420 | INFO     | all job control threads have been joined
[2025-07-28 05:37:29] 2025-07-28 03:37:00,468 | INFO     | [data] control thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:00,540 | INFO     | [job] job monitor thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:00,664 | INFO     | [payload] validate_post thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:00,681 | INFO     | [data] copytool_in thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:00,961 | INFO     | [data] copytool_out thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:01,030 | INFO     | [payload] control thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:01,265 | INFO     | [job] validate thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:01,392 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:01,393 | INFO     | [payload] failed_post thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:01,410 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:01,423 | INFO     | [job] control thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:03,593 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:09,827 | INFO     | job.realtimelogging is not enabled
[2025-07-28 05:37:29] 2025-07-28 03:37:10,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 05:37:29] 2025-07-28 03:37:12,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984674047808)>', '<ExcThread(monitor, started 139984182961920)>']
[2025-07-28 05:37:29] 2025-07-28 03:37:17,873 | INFO     | all workflow threads have been joined
[2025-07-28 05:37:29] 2025-07-28 03:37:17,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 05:37:29] 2025-07-28 03:37:17,874 | INFO     | traces error code: 0
[2025-07-28 05:37:29] 2025-07-28 03:37:17,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 05:37:29] 2025-07-28 03:37:29,163 | INFO     | PID=3083380 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 05:37:29] 2025-07-28 03:37:29,163 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 05:37:29] 2025-07-28 03:37:29,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 05:37:29] 2025-07-28 03:37:29,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 05:37:29] 2025-07-28 03:37:29,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 05:37:29] 2025-07-28 03:37:29,163 | INFO     | [monitor] control thread has ended
[2025-07-28 05:37:29] 2025-07-28 03:37:29,222 [wrapper] ==== pilot stdout END ====
[2025-07-28 05:37:29] 2025-07-28 03:37:29,224 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 05:37:29] 2025-07-28 03:37:29,226 [wrapper] pilotpid: 3083380
[2025-07-28 05:37:29] 2025-07-28 03:37:29,228 [wrapper] Pilot exit status: 0
[2025-07-28 05:37:29] 2025-07-28 03:37:29,233 [wrapper] pandaids: 6745101913
[2025-07-28 05:37:29] 2025-07-28 03:37:29,247 [wrapper] cleanup supervisor_pilot 3101621 3083381
[2025-07-28 05:37:29] 2025-07-28 03:37:29,249 [wrapper] Test setup, not cleaning
[2025-07-28 05:37:29] 2025-07-28 03:37:29,251 [wrapper] apfmon messages muted
[2025-07-28 05:37:29] 2025-07-28 03:37:29,252 [wrapper] ==== wrapper stdout END ====
[2025-07-28 05:37:29] 2025-07-28 03:37:29,254 [wrapper] ==== wrapper stderr END ====
[2025-07-28 05:37:29]  *** Error codes and diagnostics ***
[2025-07-28 05:37:29]     "exeErrorCode": 0,
[2025-07-28 05:37:29]     "exeErrorDiag": "",
[2025-07-28 05:37:29]     "pilotErrorCode": 0,
[2025-07-28 05:37:29]     "pilotErrorDiag": "",
[2025-07-28 05:37:29]  *** Listing of results directory ***
[2025-07-28 05:37:29] insgesamt 338140
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc    530466 26. Jul 10:27 pilot3.tar.gz
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc      5112 26. Jul 10:46 queuedata.json
[2025-07-28 05:37:29] -rwx------ 1 boinc boinc     36292 26. Jul 10:47 runpilot2-wrapper.sh
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc       100 28. Jul 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 05:37:29] -rwxr-xr-x 1 boinc boinc      7986 28. Jul 04:16 run_atlas
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc       105 28. Jul 04:16 job.xml
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc      6722 28. Jul 04:16 init_data.xml
[2025-07-28 05:37:29] -rw-r--r-- 2 boinc boinc 145896086 28. Jul 04:16 EVNT.45743347._002001.pool.root.1
[2025-07-28 05:37:29] drwxrwx--x 2 boinc boinc      4096 28. Jul 04:16 shared
[2025-07-28 05:37:29] -rw-r--r-- 2 boinc boinc    542881 28. Jul 04:16 input.tar.gz
[2025-07-28 05:37:29] -rw-r--r-- 2 boinc boinc     15095 28. Jul 04:16 start_atlas.sh
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc         0 28. Jul 04:16 boinc_lockfile
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc      2562 28. Jul 04:16 pandaJob.out
[2025-07-28 05:37:29] -rw------- 1 boinc boinc    980125 28. Jul 04:16 agis_schedconf.cvmfs.json
[2025-07-28 05:37:29] -rw------- 1 boinc boinc   1593052 28. Jul 04:16 agis_ddmendpoints.agis.ALL.json
[2025-07-28 05:37:29] drwx------ 4 boinc boinc      4096 28. Jul 04:16 pilot3
[2025-07-28 05:37:29] -rw------- 1 boinc boinc 195025168 28. Jul 05:36 HITS.45743349._035211.pool.root.1
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc       529 28. Jul 05:36 boinc_task_state.xml
[2025-07-28 05:37:29] -rw------- 1 boinc boinc      1019 28. Jul 05:36 memory_monitor_summary.json
[2025-07-28 05:37:29] -rw------- 1 boinc boinc    257147 28. Jul 05:36 log.45743349._035211.job.log.tgz.1
[2025-07-28 05:37:29] -rw------- 1 boinc boinc      7749 28. Jul 05:36 heartbeat.json
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc      8192 28. Jul 05:37 boinc_mmap_file
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc        27 28. Jul 05:37 wrapper_checkpoint.txt
[2025-07-28 05:37:29] -rw------- 1 boinc boinc       747 28. Jul 05:37 pilotlog.txt
[2025-07-28 05:37:29] -rw------- 1 boinc boinc        95 28. Jul 05:37 pilot_heartbeat.json
[2025-07-28 05:37:29] -rw------- 1 boinc boinc    467211 28. Jul 05:37 log.45743349._035211.job.log.1
[2025-07-28 05:37:29] -rw------- 1 boinc boinc       357 28. Jul 05:37 output.list
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc       620 28. Jul 05:37 runtime_log
[2025-07-28 05:37:29] -rw------- 1 boinc boinc    747520 28. Jul 05:37 result.tar.gz
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc      8602 28. Jul 05:37 runtime_log.err
[2025-07-28 05:37:29] -rw------- 1 boinc boinc       638 28. Jul 05:37 IIULDm9jpz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYhRLDmk9EQRm.diag
[2025-07-28 05:37:29] -rw-r--r-- 1 boinc boinc     21110 28. Jul 05:37 stderr.txt
[2025-07-28 05:37:29] HITS file was successfully produced:
[2025-07-28 05:37:29] -rw------- 1 boinc boinc 195025168 28. Jul 05:36 shared/HITS.pool.root.1
[2025-07-28 05:37:29]  *** Contents of shared directory: ***
[2025-07-28 05:37:29] insgesamt 334224
[2025-07-28 05:37:29] -rw-r--r-- 2 boinc boinc 145896086 28. Jul 04:16 ATLAS.root_0
[2025-07-28 05:37:29] -rw-r--r-- 2 boinc boinc    542881 28. Jul 04:16 input.tar.gz
[2025-07-28 05:37:29] -rw-r--r-- 2 boinc boinc     15095 28. Jul 04:16 start_atlas.sh
[2025-07-28 05:37:29] -rw------- 1 boinc boinc 195025168 28. Jul 05:36 HITS.pool.root.1
[2025-07-28 05:37:29] -rw------- 1 boinc boinc    747520 28. Jul 05:37 result.tar.gz
05:37:30 (3079749): run_atlas exited; CPU time 27836.054434
05:37:30 (3079749): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN