Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:13:55 (2292083): wrapper (7.7.26015): starting
16:13:55 (2292083): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 16:13:55] Arguments: --nthreads 12
[2025-07-26 16:13:55] Threads: 12
[2025-07-26 16:13:55] Checking for CVMFS
[2025-07-26 16:13:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:13:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:13:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:13:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:13:56] 2.12.6.0 240040 17390 311152 148787 2 117 26032422 32935937 15154 16776704 1 57160625 99.770 54367338 10518 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 16:13:56] CVMFS is ok
[2025-07-26 16:13:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:13:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:13:56] Further information can be found at the LHC@home message board.
[2025-07-26 16:13:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:13:56] Checking for apptainer binary...
[2025-07-26 16:13:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:13:56] Running /usr/bin/apptainer --version
[2025-07-26 16:13:56] apptainer version 1.4.1-1.el9
[2025-07-26 16:13:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:13:57] c6-1-24-2.aglt2.org
[2025-07-26 16:13:57] apptainer works
[2025-07-26 16:13:57] Set ATHENA_PROC_NUMBER=12
[2025-07-26 16:13:57] Set ATHENA_CORE_NUMBER=12
[2025-07-26 16:13:57] Starting ATLAS job with PandaID=6745133366
[2025-07-26 16:13:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 19:16:40]  *** The last 200 lines of the pilot log: ***
[2025-07-26 19:16:40] 2025-07-26 23:16:03,726 | INFO     | PID=2296944 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:16:40] 2025-07-26 23:16:03,733 | INFO     | .. there are 15 such processes running
[2025-07-26 19:16:40] 2025-07-26 23:16:04,722 | INFO     | monitor loop #673: job 0:6745133366 is in state 'finished'
[2025-07-26 19:16:40] 2025-07-26 23:16:04,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,261 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 19:16:40] 2025-07-26 23:16:06,264 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2640.6089464285715
[2025-07-26 19:16:40] 2025-07-26 23:16:06,292 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745133366/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,293 | INFO     | extracted standard info from prmon json
[2025-07-26 19:16:40] 2025-07-26 23:16:06,293 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 19:16:40] 2025-07-26 23:16:06,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 19:16:40] 2025-07-26 23:16:06,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 19:16:40] 2025-07-26 23:16:06,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 19:16:40] 2025-07-26 23:16:06,297 | INFO     | fitting pss+swap vs Time
[2025-07-26 19:16:40] 2025-07-26 23:16:06,298 | INFO     | sum of square deviations: 1719260889.3898327
[2025-07-26 19:16:40] 2025-07-26 23:16:06,302 | INFO     | sum of deviations: -35791263067.52543
[2025-07-26 19:16:40] 2025-07-26 23:16:06,302 | INFO     | mean x: 1753566343.3728814
[2025-07-26 19:16:40] 2025-07-26 23:16:06,302 | INFO     | mean y: 2423077.5988700567
[2025-07-26 19:16:40] 2025-07-26 23:16:06,302 | INFO     | -- intersect: 36507850897.97571
[2025-07-26 19:16:40] 2025-07-26 23:16:06,302 | INFO     | intersect: 36507850897.97571
[2025-07-26 19:16:40] 2025-07-26 23:16:06,303 | INFO     | chi2: 3.1447967090141375
[2025-07-26 19:16:40] 2025-07-26 23:16:06,303 | INFO     | sum of square deviations: 1577630600.4360402
[2025-07-26 19:16:40] 2025-07-26 23:16:06,304 | INFO     | sum of deviations: -22979838908.720936
[2025-07-26 19:16:40] 2025-07-26 23:16:06,304 | INFO     | mean x: 1753566190.877907
[2025-07-26 19:16:40] 2025-07-26 23:16:06,304 | INFO     | mean y: 2436610.4418604653
[2025-07-26 19:16:40] 2025-07-26 23:16:06,304 | INFO     | -- intersect: 25544961312.36899
[2025-07-26 19:16:40] 2025-07-26 23:16:06,304 | INFO     | intersect: 25544961312.36899
[2025-07-26 19:16:40] 2025-07-26 23:16:06,304 | INFO     | chi2: 2.4926246320722116
[2025-07-26 19:16:40] 2025-07-26 23:16:06,304 | INFO     | current chi2=2.4926246320722116 (change=20.73813150060105 %)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,305 | INFO     | right removable region: 171
[2025-07-26 19:16:40] 2025-07-26 23:16:06,305 | INFO     | sum of square deviations: 1577600893.6744158
[2025-07-26 19:16:40] 2025-07-26 23:16:06,311 | INFO     | sum of deviations: -69798331792.90694
[2025-07-26 19:16:40] 2025-07-26 23:16:06,311 | INFO     | mean x: 1753566495.8837209
[2025-07-26 19:16:40] 2025-07-26 23:16:06,311 | INFO     | mean y: 2459402.104651163
[2025-07-26 19:16:40] 2025-07-26 23:16:06,311 | INFO     | -- intersect: 77586097058.10431
[2025-07-26 19:16:40] 2025-07-26 23:16:06,311 | INFO     | intersect: 77586097058.10431
[2025-07-26 19:16:40] 2025-07-26 23:16:06,311 | INFO     | chi2: 1.1855431258323965
[2025-07-26 19:16:40] 2025-07-26 23:16:06,312 | INFO     | current chi2=1.1855431258323965 (change=62.30143835898212 %)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,312 | INFO     | sum of square deviations: 1443961665.4730587
[2025-07-26 19:16:40] 2025-07-26 23:16:06,313 | INFO     | sum of deviations: -72539964412.62875
[2025-07-26 19:16:40] 2025-07-26 23:16:06,313 | INFO     | mean x: 1753566648.3832335
[2025-07-26 19:16:40] 2025-07-26 23:16:06,313 | INFO     | mean y: 2462427.275449102
[2025-07-26 19:16:40] 2025-07-26 23:16:06,313 | INFO     | -- intersect: 88095979942.6584
[2025-07-26 19:16:40] 2025-07-26 23:16:06,313 | INFO     | intersect: 88095979942.6584
[2025-07-26 19:16:40] 2025-07-26 23:16:06,313 | INFO     | chi2: 1.0784439458140138
[2025-07-26 19:16:40] 2025-07-26 23:16:06,313 | INFO     | current chi2=1.0784439458140138 (change=9.033765004810428 %)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,313 | INFO     | left removable region: 20
[2025-07-26 19:16:40] 2025-07-26 23:16:06,314 | INFO     | sum of square deviations: 1067400363.4834436
[2025-07-26 19:16:40] 2025-07-26 23:16:06,314 | INFO     | sum of deviations: -49451730609.139015
[2025-07-26 19:16:40] 2025-07-26 23:16:06,314 | INFO     | mean x: 1753566770.3774834
[2025-07-26 19:16:40] 2025-07-26 23:16:06,320 | INFO     | mean y: 2465343.3708609273
[2025-07-26 19:16:40] 2025-07-26 23:16:06,320 | INFO     | -- intersect: 81243688880.94398
[2025-07-26 19:16:40] 2025-07-26 23:16:06,320 | INFO     | intersect: 81243688880.94398
[2025-07-26 19:16:40] 2025-07-26 23:16:06,320 | INFO     | chi2: 0.38327836517607133
[2025-07-26 19:16:40] 2025-07-26 23:16:06,320 | INFO     | -- intersect: 81243688880.94398
[2025-07-26 19:16:40] 2025-07-26 23:16:06,324 | INFO     | current memory leak: -46.33 B/s (using 151 data points, chi2=0.38)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,325 | INFO     | could have reported an average CPU frequency of 2607 MHz (9 samples)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,325 | INFO     | ..............................
[2025-07-26 19:16:40] 2025-07-26 23:16:06,325 | INFO     | . Timing measurements:
[2025-07-26 19:16:40] 2025-07-26 23:16:06,326 | INFO     | . get job = 0 s
[2025-07-26 19:16:40] 2025-07-26 23:16:06,326 | INFO     | . initial setup = 5 s
[2025-07-26 19:16:40] 2025-07-26 23:16:06,326 | INFO     | . payload setup = 34 s
[2025-07-26 19:16:40] 2025-07-26 23:16:06,326 | INFO     | . stage-in = 0 s
[2025-07-26 19:16:40] 2025-07-26 23:16:06,326 | INFO     | . payload execution = 10771 s
[2025-07-26 19:16:40] 2025-07-26 23:16:06,326 | INFO     | . stage-out = 4 s
[2025-07-26 19:16:40] 2025-07-26 23:16:06,326 | INFO     | . log creation = 0 s
[2025-07-26 19:16:40] 2025-07-26 23:16:06,326 | INFO     | ..............................
[2025-07-26 19:16:40] 2025-07-26 23:16:06,513 | INFO     | 
[2025-07-26 19:16:40] 2025-07-26 23:16:06,514 | INFO     | job summary report
[2025-07-26 19:16:40] 2025-07-26 23:16:06,514 | INFO     | --------------------------------------------------
[2025-07-26 19:16:40] 2025-07-26 23:16:06,514 | INFO     | PanDA job id: 6745133366
[2025-07-26 19:16:40] 2025-07-26 23:16:06,514 | INFO     | task id: 45743349
[2025-07-26 19:16:40] 2025-07-26 23:16:06,514 | INFO     | errors: (none)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | pilot state: finished 
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | transexitcode: 0
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | exeerrorcode: 0
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | exeerrordiag: 
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | exitcode: 0
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | exitmsg: OK
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | cpuconsumptiontime: 51463 s
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | nevents: 400
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | neventsw: 0
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | pid: 2309432
[2025-07-26 19:16:40] 2025-07-26 23:16:06,515 | INFO     | pgrp: 2309432
[2025-07-26 19:16:40] 2025-07-26 23:16:06,516 | INFO     | corecount: 12
[2025-07-26 19:16:40] 2025-07-26 23:16:06,516 | INFO     | event service: False
[2025-07-26 19:16:40] 2025-07-26 23:16:06,516 | INFO     | sizes: {0: 2397248, 1: 2397332, 2: 2397531, 13: 2397531, 20: 2397849, 24: 2397877, 10810: 2426936, 10811: 2426935, 10815: 2435989, 10817: 2436045, 10851: 2436303}
[2025-07-26 19:16:40] 2025-07-26 23:16:06,516 | INFO     | --------------------------------------------------
[2025-07-26 19:16:40] 2025-07-26 23:16:06,516 | INFO     | 
[2025-07-26 19:16:40] 2025-07-26 23:16:06,516 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 19:16:40] 2025-07-26 23:16:06,689 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,689 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,689 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | job 6745133366 has completed (purged errors)
[2025-07-26 19:16:40] 2025-07-26 23:16:06,691 | INFO     | overall cleanup function is called
[2025-07-26 19:16:40] 2025-07-26 23:16:07,704 | INFO     | --- collectZombieJob: --- 10, [2309432]
[2025-07-26 19:16:40] 2025-07-26 23:16:07,705 | INFO     | zombie collector waiting for pid 2309432
[2025-07-26 19:16:40] 2025-07-26 23:16:07,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 19:16:40] 2025-07-26 23:16:07,705 | INFO     | collected zombie processes
[2025-07-26 19:16:40] 2025-07-26 23:16:07,705 | INFO     | will attempt to kill all subprocesses of pid=2309432
[2025-07-26 19:16:40] 2025-07-26 23:16:08,339 | INFO     | process IDs to be killed: [2309432] (in reverse order)
[2025-07-26 19:16:40] 2025-07-26 23:16:08,525 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 19:16:40] 2025-07-26 23:16:08,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 19:16:40] 2025-07-26 23:16:08,542 | INFO     | did not find any defunct processes belonging to 2309432
[2025-07-26 19:16:40] 2025-07-26 23:16:08,564 | INFO     | did not find any defunct processes belonging to 2309432
[2025-07-26 19:16:40] 2025-07-26 23:16:08,565 | INFO     | ready for new job
[2025-07-26 19:16:40] 2025-07-26 23:16:08,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 19:16:40] 2025-07-26 23:16:08,568 | INFO     | ***************************************
[2025-07-26 19:16:40] 2025-07-26 23:16:08,568 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 19:16:40] 2025-07-26 23:16:08,568 | INFO     | ***************************************
[2025-07-26 19:16:40] 2025-07-26 23:16:08,568 | INFO     | 
[2025-07-26 19:16:40] 2025-07-26 23:16:08,591 | INFO     | architecture information:
[2025-07-26 19:16:40] 2025-07-26 23:16:08,591 | INFO     | executing command: cat /etc/os-release
[2025-07-26 19:16:40] 2025-07-26 23:16:08,616 | INFO     | cat /etc/os-release:
[2025-07-26 19:16:40] NAME="CentOS Linux"
[2025-07-26 19:16:40] VERSION="7 (Core)"
[2025-07-26 19:16:40] ID="centos"
[2025-07-26 19:16:40] ID_LIKE="rhel fedora"
[2025-07-26 19:16:40] VERSION_ID="7"
[2025-07-26 19:16:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 19:16:40] ANSI_COLOR="0;31"
[2025-07-26 19:16:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 19:16:40] HOME_URL="https://www.centos.org/"
[2025-07-26 19:16:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 19:16:40] 
[2025-07-26 19:16:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 19:16:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 19:16:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 19:16:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 19:16:40] 
[2025-07-26 19:16:40] 2025-07-26 23:16:08,616 | INFO     | ***************************************
[2025-07-26 19:16:40] 2025-07-26 23:16:09,120 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 19:16:40] 2025-07-26 23:16:09,166 | INFO     | sufficient remaining disk space (76436996096 B)
[2025-07-26 19:16:40] 2025-07-26 23:16:09,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 19:16:40] 2025-07-26 23:16:09,167 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 19:16:40] 2025-07-26 23:16:09,167 | INFO     | update_server=False
[2025-07-26 19:16:40] 2025-07-26 23:16:09,167 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 19:16:40] 2025-07-26 23:16:09,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:16:40] 2025-07-26 23:16:09,168 | INFO     | aborting loop
[2025-07-26 19:16:40] 2025-07-26 23:16:09,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 19:16:40] 2025-07-26 23:16:09,311 | INFO     | all job control threads have been joined
[2025-07-26 19:16:40] 2025-07-26 23:16:09,578 | INFO     | all payload control threads have been joined
[2025-07-26 19:16:40] 2025-07-26 23:16:09,665 | INFO     | all data control threads have been joined
[2025-07-26 19:16:40] 2025-07-26 23:16:10,173 | INFO     | [job] retrieve thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:10,174 | INFO     | [job] job monitor thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:10,318 | INFO     | [job] control thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:10,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:10,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 19:16:40] 2025-07-26 23:16:10,586 | INFO     | [payload] control thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:10,672 | INFO     | [data] control thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:11,138 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:11,176 | INFO     | [payload] validate_post thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:11,178 | INFO     | [job] validate thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:11,215 | INFO     | [data] copytool_out thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:11,244 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:11,259 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:11,274 | INFO     | [payload] failed_post thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:11,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:16:40] 2025-07-26 23:16:11,567 | INFO     | [data] copytool_in thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:12,541 | INFO     | [job] queue monitor thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:14,579 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 19:16:40] 2025-07-26 23:16:16,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256093914944)>', '<ExcThread(monitor, started 140255277594368)>']
[2025-07-26 19:16:40] 2025-07-26 23:16:21,537 | INFO     | all workflow threads have been joined
[2025-07-26 19:16:40] 2025-07-26 23:16:21,538 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 19:16:40] 2025-07-26 23:16:21,538 | INFO     | traces error code: 0
[2025-07-26 19:16:40] 2025-07-26 23:16:21,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 19:16:40] 2025-07-26 23:16:38,320 | INFO     | PID=2296944 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:16:40] 2025-07-26 23:16:38,321 | INFO     | .. there are 15 such processes running
[2025-07-26 19:16:40] 2025-07-26 23:16:38,322 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 19:16:40] 2025-07-26 23:16:38,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 19:16:40] 2025-07-26 23:16:38,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 19:16:40] 2025-07-26 23:16:38,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 19:16:40] 2025-07-26 23:16:38,322 | INFO     | [monitor] control thread has ended
[2025-07-26 19:16:40] 2025-07-26 23:16:38,571 [wrapper] ==== pilot stdout END ====
[2025-07-26 19:16:40] 2025-07-26 23:16:38,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 19:16:40] 2025-07-26 23:16:38,578 [wrapper] pilotpid: 2296944
[2025-07-26 19:16:40] 2025-07-26 23:16:38,582 [wrapper] Pilot exit status: 0
[2025-07-26 19:16:40] 2025-07-26 23:16:38,704 [wrapper] pandaids: 6745133366
[2025-07-26 19:16:40] 2025-07-26 23:16:39,033 [wrapper] cleanup supervisor_pilot 3204869 2296945
[2025-07-26 19:16:40] 2025-07-26 23:16:39,058 [wrapper] Test setup, not cleaning
[2025-07-26 19:16:40] 2025-07-26 23:16:39,103 [wrapper] apfmon messages muted
[2025-07-26 19:16:40] 2025-07-26 23:16:39,147 [wrapper] ==== wrapper stdout END ====
[2025-07-26 19:16:40] 2025-07-26 23:16:39,181 [wrapper] ==== wrapper stderr END ====
[2025-07-26 19:16:40]  *** Error codes and diagnostics ***
[2025-07-26 19:16:40]     "exeErrorCode": 0,
[2025-07-26 19:16:40]     "exeErrorDiag": "",
[2025-07-26 19:16:40]     "pilotErrorCode": 0,
[2025-07-26 19:16:40]     "pilotErrorDiag": "",
[2025-07-26 19:16:40]  *** Listing of results directory ***
[2025-07-26 19:16:40] total 356868
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 06:53 pilot3.tar.gz
[2025-07-26 19:16:40] -rwx------. 1 boincer umatlas     36292 Jul 26 07:01 runpilot2-wrapper.sh
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 07:01 queuedata.json
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas       100 Jul 26 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 19:16:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 16:13 run_atlas
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas       105 Jul 26 16:13 job.xml
[2025-07-26 19:16:40] -rw-r--r--. 2 boincer umatlas 147880241 Jul 26 16:13 EVNT.45743347._002089.pool.root.1
[2025-07-26 19:16:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:13 start_atlas.sh
[2025-07-26 19:16:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 16:13 shared
[2025-07-26 19:16:40] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 16:13 input.tar.gz
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas         0 Jul 26 16:13 boinc_lockfile
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 16:13 pandaJob.out
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas    980125 Jul 26 16:14 agis_schedconf.cvmfs.json
[2025-07-26 19:16:40] drwx------. 4 boincer umatlas      4096 Jul 26 16:14 pilot3
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas      6844 Jul 26 19:13 init_data.xml
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas 211058467 Jul 26 19:14 HITS.45743349._036625.pool.root.1
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas       531 Jul 26 19:14 boinc_task_state.xml
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas      1039 Jul 26 19:15 memory_monitor_summary.json
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas   1593052 Jul 26 19:15 agis_ddmendpoints.agis.ALL.json
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas    413910 Jul 26 19:15 log.45743349._036625.job.log.tgz.1
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas      7831 Jul 26 19:16 heartbeat.json
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 19:16 boinc_mmap_file
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas        28 Jul 26 19:16 wrapper_checkpoint.txt
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas       823 Jul 26 19:16 pilotlog.txt
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas        95 Jul 26 19:16 pilot_heartbeat.json
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas    895117 Jul 26 19:16 log.45743349._036625.job.log.1
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas       357 Jul 26 19:16 output.list
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas       620 Jul 26 19:16 runtime_log
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas   1331200 Jul 26 19:16 result.tar.gz
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas      8668 Jul 26 19:16 runtime_log.err
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas       656 Jul 26 19:16 5NxLDmmprz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMe0KDmldvFKm.diag
[2025-07-26 19:16:40] -rw-r--r--. 1 boincer umatlas     21360 Jul 26 19:16 stderr.txt
[2025-07-26 19:16:40] HITS file was successfully produced:
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas 211058467 Jul 26 19:14 shared/HITS.pool.root.1
[2025-07-26 19:16:40]  *** Contents of shared directory: ***
[2025-07-26 19:16:40] total 352380
[2025-07-26 19:16:40] -rw-r--r--. 2 boincer umatlas 147880241 Jul 26 16:13 ATLAS.root_0
[2025-07-26 19:16:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:13 start_atlas.sh
[2025-07-26 19:16:40] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 16:13 input.tar.gz
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas 211058467 Jul 26 19:14 HITS.pool.root.1
[2025-07-26 19:16:40] -rw-------. 1 boincer umatlas   1331200 Jul 26 19:16 result.tar.gz
19:17:01 (2292083): run_atlas exited; CPU time 51758.790006
19:17:01 (2292083): called boinc_finish(0)

</stderr_txt>
]]>

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