Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:45:23 (1797689): wrapper (7.7.26015): starting
06:45:23 (1797689): wrapper: running run_atlas (--nthreads 6)
[2025-07-27 06:45:23] Arguments: --nthreads 6
[2025-07-27 06:45:23] Threads: 6
[2025-07-27 06:45:23] Checking for CVMFS
[2025-07-27 06:45:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:45:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:45:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:45:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:45:24] 2.11.5.0 3914476 3308 77312 148790 0 188 29218972 52428801 885 130560 2 5710487 99.995 122572 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-27 06:45:24] CVMFS is ok
[2025-07-27 06:45:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:45:24] Checking for apptainer binary...
[2025-07-27 06:45:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:45:24] Running /usr/bin/apptainer --version
[2025-07-27 06:45:24] apptainer version 1.3.6-1.el9
[2025-07-27 06:45:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:45:24] testio002
[2025-07-27 06:45:24] apptainer works
[2025-07-27 06:45:24] Set ATHENA_PROC_NUMBER=6
[2025-07-27 06:45:24] Set ATHENA_CORE_NUMBER=6
[2025-07-27 06:45:24] Starting ATLAS job with PandaID=6745134620
[2025-07-27 06:45:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 07:52:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 07:52:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/c3/log.45743349._037032.job.log.tgz.1
[2025-07-27 07:52:04]  workdir=None
[2025-07-27 07:52:04] ]
[2025-07-27 07:52:04] 2025-07-26 22:51:13,254 | INFO     | transferring file log.45743349._037032.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6745134620/log.45743349._037032.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 07:52:04] 2025-07-26 22:51:13,254 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6745134620/log.45743349._037032.job.log.tgz.1 /var/lib/boinc/slots/2/log.45743349._037032.job
[2025-07-27 07:52:04] 2025-07-26 22:51:13,260 | INFO     | adding to output.list: log.45743349._037032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/c3/log.45743349._037032.job.log.tg
[2025-07-27 07:52:04] 2025-07-26 22:51:13,261 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 07:52:04] 2025-07-26 22:51:13,261 | INFO     | summary of transferred files:
[2025-07-27 07:52:04] 2025-07-26 22:51:13,261 | INFO     |  -- lfn=log.45743349._037032.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 07:52:04] 2025-07-26 22:51:13,261 | INFO     | stage-out finished correctly
[2025-07-27 07:52:04] 2025-07-26 22:51:13,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 07:52:04] 2025-07-26 22:51:13,868 | INFO     | job 6745134620 has state=finished
[2025-07-27 07:52:04] 2025-07-26 22:51:13,868 | INFO     | preparing for final server update for job 6745134620 in state='finished'
[2025-07-27 07:52:04] 2025-07-26 22:51:13,868 | INFO     | this job has now completed (state=finished)
[2025-07-27 07:52:04] 2025-07-26 22:51:13,868 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 07:52:04] 2025-07-26 22:51:13,868 | INFO     | log transfer has been attempted: DONE
[2025-07-27 07:52:04] 2025-07-26 22:51:13,868 | INFO     | job 6745134620 has finished - writing final server update
[2025-07-27 07:52:04] 2025-07-26 22:51:13,868 | INFO     | total number of processed events: 400 (read)
[2025-07-27 07:52:04] 2025-07-26 22:51:13,869 | INFO     | executing command: lscpu
[2025-07-27 07:52:04] 2025-07-26 22:51:13,876 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 07:52:04] 2025-07-26 22:51:14,482 | INFO     | PID=1801421 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 07:52:04] 2025-07-26 22:51:14,482 | INFO     | .. there are 2 such processes running
[2025-07-27 07:52:04] 2025-07-26 22:51:15,577 | INFO     | monitor loop #297: job 0:6745134620 is in state 'finished'
[2025-07-27 07:52:04] 2025-07-26 22:51:15,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:52:04] 2025-07-26 22:51:18,081 | INFO     | monitor loop #298: job 0:6745134620 is in state 'finished'
[2025-07-27 07:52:04] 2025-07-26 22:51:18,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:52:04] 2025-07-26 22:51:20,584 | INFO     | monitor loop #299: job 0:6745134620 is in state 'finished'
[2025-07-27 07:52:04] 2025-07-26 22:51:20,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:52:04] 2025-07-26 22:51:23,088 | INFO     | monitor loop #300: job 0:6745134620 is in state 'finished'
[2025-07-27 07:52:04] 2025-07-26 22:51:23,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:52:04] 2025-07-26 22:51:25,591 | INFO     | monitor loop #301: job 0:6745134620 is in state 'finished'
[2025-07-27 07:52:04] 2025-07-26 22:51:25,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:52:04] 2025-07-26 22:51:28,095 | INFO     | monitor loop #302: job 0:6745134620 is in state 'finished'
[2025-07-27 07:52:04] 2025-07-26 22:51:28,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:52:04] 2025-07-26 22:51:30,598 | INFO     | monitor loop #303: job 0:6745134620 is in state 'finished'
[2025-07-27 07:52:04] 2025-07-26 22:51:30,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:52:04] 2025-07-26 22:51:32,133 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 07:52:04] 2025-07-26 22:51:32,134 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3960.1101249999997
[2025-07-27 07:52:04] 2025-07-26 22:51:32,135 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6745134620/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:52:04] 2025-07-26 22:51:32,135 | INFO     | extracted standard info from prmon json
[2025-07-27 07:52:04] 2025-07-26 22:51:32,135 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 07:52:04] 2025-07-26 22:51:32,135 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 07:52:04] 2025-07-26 22:51:32,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 07:52:04] 2025-07-26 22:51:32,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | fitting pss+swap vs Time
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | sum of square deviations: 60482994.5
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | sum of deviations: 9877301658.0
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | mean x: 1753568388.5
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | mean y: 2362267.379310345
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | -- intersect: -286367783495.6159
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | intersect: -286367783495.6159
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | chi2: 1.2377195011324227
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | -- intersect: -286367783495.6159
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | current memory leak: 163.31 B/s (using 58 data points, chi2=1.24)
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | could have reported an average CPU frequency of 4281 MHz (6 samples)
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | ..............................
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | . Timing measurements:
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | . get job = 0 s
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | . initial setup = 4 s
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | . payload setup = 1 s
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | . stage-in = 0 s
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | . payload execution = 3925 s
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | . stage-out = 0 s
[2025-07-27 07:52:04] 2025-07-26 22:51:32,136 | INFO     | . log creation = 0 s
[2025-07-27 07:52:04] 2025-07-26 22:51:32,137 | INFO     | ..............................
[2025-07-27 07:52:04] 2025-07-26 22:51:32,289 | INFO     | 
[2025-07-27 07:52:04] 2025-07-26 22:51:32,290 | INFO     | job summary report
[2025-07-27 07:52:04] 2025-07-26 22:51:32,290 | INFO     | --------------------------------------------------
[2025-07-27 07:52:04] 2025-07-26 22:51:32,290 | INFO     | PanDA job id: 6745134620
[2025-07-27 07:52:04] 2025-07-26 22:51:32,290 | INFO     | task id: 45743349
[2025-07-27 07:52:04] 2025-07-26 22:51:32,290 | INFO     | errors: (none)
[2025-07-27 07:52:04] 2025-07-26 22:51:32,290 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 07:52:04] 2025-07-26 22:51:32,291 | INFO     | pilot state: finished 
[2025-07-27 07:52:04] 2025-07-26 22:51:32,291 | INFO     | transexitcode: 0
[2025-07-27 07:52:04] 2025-07-26 22:51:32,291 | INFO     | exeerrorcode: 0
[2025-07-27 07:52:04] 2025-07-26 22:51:32,291 | INFO     | exeerrordiag: 
[2025-07-27 07:52:04] 2025-07-26 22:51:32,291 | INFO     | exitcode: 0
[2025-07-27 07:52:04] 2025-07-26 22:51:32,291 | INFO     | exitmsg: OK
[2025-07-27 07:52:04] 2025-07-26 22:51:32,291 | INFO     | cpuconsumptiontime: 19536 s
[2025-07-27 07:52:04] 2025-07-26 22:51:32,291 | INFO     | nevents: 400
[2025-07-27 07:52:04] 2025-07-26 22:51:32,292 | INFO     | neventsw: 0
[2025-07-27 07:52:04] 2025-07-26 22:51:32,292 | INFO     | pid: 1808038
[2025-07-27 07:52:04] 2025-07-26 22:51:32,292 | INFO     | pgrp: 1808038
[2025-07-27 07:52:04] 2025-07-26 22:51:32,292 | INFO     | corecount: 6
[2025-07-27 07:52:04] 2025-07-26 22:51:32,292 | INFO     | event service: False
[2025-07-27 07:52:04] 2025-07-26 22:51:32,292 | INFO     | sizes: {0: 2397422, 1: 2397684, 10: 2397712, 3930: 2423628, 3931: 2432682, 3950: 2432820}
[2025-07-27 07:52:04] 2025-07-26 22:51:32,292 | INFO     | --------------------------------------------------
[2025-07-27 07:52:04] 2025-07-26 22:51:32,292 | INFO     | 
[2025-07-27 07:52:04] 2025-07-26 22:51:32,293 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | job 6745134620 has completed (purged errors)
[2025-07-27 07:52:04] 2025-07-26 22:51:32,313 | INFO     | overall cleanup function is called
[2025-07-27 07:52:04] 2025-07-26 22:51:33,318 | INFO     | --- collectZombieJob: --- 10, [1808038]
[2025-07-27 07:52:04] 2025-07-26 22:51:33,319 | INFO     | zombie collector waiting for pid 1808038
[2025-07-27 07:52:04] 2025-07-26 22:51:33,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 07:52:04] 2025-07-26 22:51:33,319 | INFO     | collected zombie processes
[2025-07-27 07:52:04] 2025-07-26 22:51:33,319 | INFO     | will attempt to kill all subprocesses of pid=1808038
[2025-07-27 07:52:04] 2025-07-26 22:51:33,351 | INFO     | process IDs to be killed: [1808038] (in reverse order)
[2025-07-27 07:52:04] 2025-07-26 22:51:33,365 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 07:52:04] 2025-07-26 22:51:33,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 07:52:04] 2025-07-26 22:51:33,366 | INFO     | did not find any defunct processes belonging to 1808038
[2025-07-27 07:52:04] 2025-07-26 22:51:33,367 | INFO     | did not find any defunct processes belonging to 1808038
[2025-07-27 07:52:04] 2025-07-26 22:51:33,367 | INFO     | ready for new job
[2025-07-27 07:52:04] 2025-07-26 22:51:33,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 07:52:04] 2025-07-26 22:51:33,367 | INFO     | ***************************************
[2025-07-27 07:52:04] 2025-07-26 22:51:33,367 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 07:52:04] 2025-07-26 22:51:33,367 | INFO     | ***************************************
[2025-07-27 07:52:04] 2025-07-26 22:51:33,367 | INFO     | 
[2025-07-27 07:52:04] 2025-07-26 22:51:33,368 | INFO     | architecture information:
[2025-07-27 07:52:04] 2025-07-26 22:51:33,368 | INFO     | executing command: cat /etc/os-release
[2025-07-27 07:52:04] 2025-07-26 22:51:33,372 | INFO     | cat /etc/os-release:
[2025-07-27 07:52:04] NAME="CentOS Linux"
[2025-07-27 07:52:04] VERSION="7 (Core)"
[2025-07-27 07:52:04] ID="centos"
[2025-07-27 07:52:04] ID_LIKE="rhel fedora"
[2025-07-27 07:52:04] VERSION_ID="7"
[2025-07-27 07:52:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 07:52:04] ANSI_COLOR="0;31"
[2025-07-27 07:52:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 07:52:04] HOME_URL="https://www.centos.org/"
[2025-07-27 07:52:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 07:52:04] 
[2025-07-27 07:52:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 07:52:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 07:52:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 07:52:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 07:52:04] 
[2025-07-27 07:52:04] 2025-07-26 22:51:33,372 | INFO     | ***************************************
[2025-07-27 07:52:04] 2025-07-26 22:51:33,874 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-07-27 07:52:04] 2025-07-26 22:51:33,883 | INFO     | sufficient remaining disk space (316167684096 B)
[2025-07-27 07:52:04] 2025-07-26 22:51:33,883 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 07:52:04] 2025-07-26 22:51:33,883 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 07:52:04] 2025-07-26 22:51:33,883 | INFO     | update_server=False
[2025-07-27 07:52:04] 2025-07-26 22:51:33,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 07:52:04] 2025-07-26 22:51:33,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:52:04] 2025-07-26 22:51:33,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 07:52:04] 2025-07-26 22:51:34,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:52:04] 2025-07-26 22:51:34,108 | INFO     | aborting loop
[2025-07-27 07:52:04] 2025-07-26 22:51:34,875 | INFO     | all data control threads have been joined
[2025-07-27 07:52:04] 2025-07-26 22:51:34,886 | INFO     | all payload control threads have been joined
[2025-07-27 07:52:04] 2025-07-26 22:51:34,887 | INFO     | [job] retrieve thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:34,887 | INFO     | [job] queue monitor thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:34,937 | INFO     | [job] validate thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:34,950 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,055 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,113 | INFO     | [job] job monitor thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,370 | INFO     | all job control threads have been joined
[2025-07-27 07:52:04] 2025-07-26 22:51:35,376 | INFO     | [payload] failed_post thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,733 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,881 | INFO     | [data] control thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,889 | INFO     | [data] copytool_out thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,889 | INFO     | [payload] control thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,921 | INFO     | [payload] validate_post thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:35,950 | INFO     | [data] copytool_in thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:36,376 | INFO     | [job] control thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:37,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 07:52:04] 2025-07-26 22:51:41,351 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:44,492 | INFO     | job.realtimelogging is not enabled
[2025-07-27 07:52:04] 2025-07-26 22:51:45,498 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 07:52:04] 2025-07-26 22:51:46,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508827875136)>', '<ExcThread(monitor, started 140508470945536)>']
[2025-07-27 07:52:04] 2025-07-26 22:51:51,425 | INFO     | all workflow threads have been joined
[2025-07-27 07:52:04] 2025-07-26 22:51:51,425 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 07:52:04] 2025-07-26 22:51:51,425 | INFO     | traces error code: 0
[2025-07-27 07:52:04] 2025-07-26 22:51:51,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 07:52:04] 2025-07-26 22:52:04,653 | INFO     | PID=1801421 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 07:52:04] 2025-07-26 22:52:04,654 | INFO     | .. there are 2 such processes running
[2025-07-27 07:52:04] 2025-07-26 22:52:04,654 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 07:52:04] 2025-07-26 22:52:04,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 07:52:04] 2025-07-26 22:52:04,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 07:52:04] 2025-07-26 22:52:04,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 07:52:04] 2025-07-26 22:52:04,654 | INFO     | [monitor] control thread has ended
[2025-07-27 07:52:04] 2025-07-26 22:52:04,686 [wrapper] ==== pilot stdout END ====
[2025-07-27 07:52:04] 2025-07-26 22:52:04,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 07:52:04] 2025-07-26 22:52:04,687 [wrapper] pilotpid: 1801421
[2025-07-27 07:52:04] 2025-07-26 22:52:04,688 [wrapper] Pilot exit status: 0
[2025-07-27 07:52:04] 2025-07-26 22:52:04,691 [wrapper] pandaids: 6745134620
[2025-07-27 07:52:04] 2025-07-26 22:52:04,698 [wrapper] cleanup supervisor_pilot 1841222 1801422
[2025-07-27 07:52:04] 2025-07-26 22:52:04,698 [wrapper] Test setup, not cleaning
[2025-07-27 07:52:04] 2025-07-26 22:52:04,699 [wrapper] apfmon messages muted
[2025-07-27 07:52:04] 2025-07-26 22:52:04,700 [wrapper] ==== wrapper stdout END ====
[2025-07-27 07:52:04] 2025-07-26 22:52:04,700 [wrapper] ==== wrapper stderr END ====
[2025-07-27 07:52:04]  *** Error codes and diagnostics ***
[2025-07-27 07:52:04]     "exeErrorCode": 0,
[2025-07-27 07:52:04]     "exeErrorDiag": "",
[2025-07-27 07:52:04]     "pilotErrorCode": 0,
[2025-07-27 07:52:04]     "pilotErrorDiag": "",
[2025-07-27 07:52:04]  *** Listing of results directory ***
[2025-07-27 07:52:04] total 351196
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc    530466 Jul 26 20:03 pilot3.tar.gz
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc      5112 Jul 26 20:21 queuedata.json
[2025-07-27 07:52:04] -rwx------. 1 boinc boinc     36292 Jul 26 20:23 runpilot2-wrapper.sh
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc       100 Jul 27 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 07:52:04] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 06:45 run_atlas
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc       105 Jul 27 06:45 job.xml
[2025-07-27 07:52:04] -rw-r--r--. 2 boinc boinc     15095 Jul 27 06:45 start_atlas.sh
[2025-07-27 07:52:04] drwxrwx--x. 2 boinc boinc        68 Jul 27 06:45 shared
[2025-07-27 07:52:04] -rw-r--r--. 2 boinc boinc    542895 Jul 27 06:45 input.tar.gz
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc      9627 Jul 27 06:45 init_data.xml
[2025-07-27 07:52:04] -rw-r--r--. 2 boinc boinc 144988761 Jul 27 06:45 EVNT.45743347._002116.pool.root.1
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc         0 Jul 27 06:45 boinc_lockfile
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc      2561 Jul 27 06:45 pandaJob.out
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc    980125 Jul 27 06:45 agis_schedconf.cvmfs.json
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc   1593052 Jul 27 06:45 agis_ddmendpoints.agis.ALL.json
[2025-07-27 07:52:04] drwx------. 4 boinc boinc      4096 Jul 27 06:45 pilot3
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc 209412465 Jul 27 07:50 HITS.45743349._037032.pool.root.1
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc       529 Jul 27 07:51 boinc_task_state.xml
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc      1030 Jul 27 07:51 memory_monitor_summary.json
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc    254631 Jul 27 07:51 log.45743349._037032.job.log.tgz.1
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc      7795 Jul 27 07:51 heartbeat.json
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc      8192 Jul 27 07:51 boinc_mmap_file
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc        27 Jul 27 07:51 wrapper_checkpoint.txt
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc        95 Jul 27 07:52 pilot_heartbeat.json
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc       822 Jul 27 07:52 pilotlog.txt
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc    421981 Jul 27 07:52 log.45743349._037032.job.log.1
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc       357 Jul 27 07:52 output.list
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc       620 Jul 27 07:52 runtime_log
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc    696320 Jul 27 07:52 result.tar.gz
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc      8618 Jul 27 07:52 runtime_log.err
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc       641 Jul 27 07:52 EpQNDmuAsz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvf0KDmHgrh8n.diag
[2025-07-27 07:52:04] -rw-r--r--. 1 boinc boinc     22080 Jul 27 07:52 stderr.txt
[2025-07-27 07:52:04] HITS file was successfully produced:
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc 209412465 Jul 27 07:50 shared/HITS.pool.root.1
[2025-07-27 07:52:04]  *** Contents of shared directory: ***
[2025-07-27 07:52:04] total 347328
[2025-07-27 07:52:04] -rw-r--r--. 2 boinc boinc     15095 Jul 27 06:45 start_atlas.sh
[2025-07-27 07:52:04] -rw-r--r--. 2 boinc boinc    542895 Jul 27 06:45 input.tar.gz
[2025-07-27 07:52:04] -rw-r--r--. 2 boinc boinc 144988761 Jul 27 06:45 ATLAS.root_0
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc 209412465 Jul 27 07:50 HITS.pool.root.1
[2025-07-27 07:52:04] -rw-------. 1 boinc boinc    696320 Jul 27 07:52 result.tar.gz
07:52:05 (1797689): run_atlas exited; CPU time 19560.458225
07:52:05 (1797689): called boinc_finish(0)

</stderr_txt>
]]>

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