Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:44:24 (4009365): wrapper (7.7.26015): starting
12:44:24 (4009365): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 12:44:24] Arguments: --nthreads 8
[2025-07-26 12:44:24] Threads: 8
[2025-07-26 12:44:24] Checking for CVMFS
[2025-07-26 12:44:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 12:44:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 12:44:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 12:44:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 12:44:24] 2.13.1.0 4026694 6990 93768 148783 2 188 20965397 40960001 12117 16776704 0 95686404 99.999 255175 59205 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 12:44:24] CVMFS is ok
[2025-07-26 12:44:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 12:44:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 12:44:24] Further information can be found at the LHC@home message board.
[2025-07-26 12:44:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 12:44:24] Checking for apptainer binary...
[2025-07-26 12:44:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 12:44:24] Running /usr/bin/apptainer --version
[2025-07-26 12:44:24] apptainer version 1.4.1-1.el9
[2025-07-26 12:44:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 12:44:25] c-208-38.aglt2.org
[2025-07-26 12:44:25] apptainer works
[2025-07-26 12:44:25] Set ATHENA_PROC_NUMBER=8
[2025-07-26 12:44:25] Set ATHENA_CORE_NUMBER=8
[2025-07-26 12:44:25] Starting ATLAS job with PandaID=6745133920
[2025-07-26 12:44:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:42:17]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:42:17]  protocol_id=None
[2025-07-26 13:42:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 13:42:17]  replicas=None
[2025-07-26 13:42:17]  scope=mc23_13p6TeV
[2025-07-26 13:42:17]  status=None
[2025-07-26 13:42:17]  status_code=0
[2025-07-26 13:42:17]  storage_token=
[2025-07-26 13:42:17]  surl=/tmp/boinchome/slots/12/PanDA_Pilot-6745133920/log.45743349._036922.job.log.tgz.1
[2025-07-26 13:42:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/0e/log.45743349._036922.job.log.tgz.1
[2025-07-26 13:42:17]  workdir=None
[2025-07-26 13:42:17] ]
[2025-07-26 13:42:17] 2025-07-26 17:41:36,182 | INFO     | transferring file log.45743349._036922.job.log.tgz.1 from /tmp/boinchome/slots/12/PanDA_Pilot-6745133920/log.45743349._036922.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 13:42:17] 2025-07-26 17:41:36,182 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/12/PanDA_Pilot-6745133920/log.45743349._036922.job.log.tgz.1 /tmp/boinchome/slots/12/log.45743349._036922.j
[2025-07-26 13:42:17] 2025-07-26 17:41:36,201 | INFO     | adding to output.list: log.45743349._036922.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/0e/log.45743349._036922.job.log.tg
[2025-07-26 13:42:17] 2025-07-26 17:41:36,202 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 13:42:17] 2025-07-26 17:41:36,202 | INFO     | summary of transferred files:
[2025-07-26 13:42:17] 2025-07-26 17:41:36,202 | INFO     |  -- lfn=log.45743349._036922.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 13:42:17] 2025-07-26 17:41:36,202 | INFO     | stage-out finished correctly
[2025-07-26 13:42:17] 2025-07-26 17:41:36,421 | INFO     | PID=4015208 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 13:42:17] 2025-07-26 17:41:36,421 | INFO     | .. there are 16 such processes running
[2025-07-26 13:42:17] 2025-07-26 17:41:37,791 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 13:42:17] 2025-07-26 17:41:38,230 | INFO     | monitor loop #255: job 0:6745133920 is in state 'finished'
[2025-07-26 13:42:17] 2025-07-26 17:41:38,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:42:17] 2025-07-26 17:41:40,312 | INFO     | job 6745133920 has state=finished
[2025-07-26 13:42:17] 2025-07-26 17:41:40,312 | INFO     | preparing for final server update for job 6745133920 in state='finished'
[2025-07-26 13:42:17] 2025-07-26 17:41:40,313 | INFO     | this job has now completed (state=finished)
[2025-07-26 13:42:17] 2025-07-26 17:41:40,313 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 13:42:17] 2025-07-26 17:41:40,313 | INFO     | log transfer has been attempted: DONE
[2025-07-26 13:42:17] 2025-07-26 17:41:40,313 | INFO     | job 6745133920 has finished - writing final server update
[2025-07-26 13:42:17] 2025-07-26 17:41:40,313 | INFO     | total number of processed events: 400 (read)
[2025-07-26 13:42:17] 2025-07-26 17:41:40,314 | INFO     | executing command: lscpu
[2025-07-26 13:42:17] 2025-07-26 17:41:40,370 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 13:42:17] 2025-07-26 17:41:40,734 | INFO     | monitor loop #256: job 0:6745133920 is in state 'finished'
[2025-07-26 13:42:17] 2025-07-26 17:41:40,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:42:17] 2025-07-26 17:41:43,235 | INFO     | monitor loop #257: job 0:6745133920 is in state 'finished'
[2025-07-26 13:42:17] 2025-07-26 17:41:43,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:42:17] 2025-07-26 17:41:43,821 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 13:42:17] 2025-07-26 17:41:43,826 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3734.9216249999986
[2025-07-26 13:42:17] 2025-07-26 17:41:43,839 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6745133920/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:42:17] 2025-07-26 17:41:43,840 | INFO     | extracted standard info from prmon json
[2025-07-26 13:42:17] 2025-07-26 17:41:43,840 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 13:42:17] 2025-07-26 17:41:43,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:42:17] 2025-07-26 17:41:43,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:42:17] 2025-07-26 17:41:43,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:42:17] 2025-07-26 17:41:43,841 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | sum of square deviations: 36465800.0
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | sum of deviations: -25040439.00000003
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | mean x: 1753550067.0
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | mean y: 2536291.7346938774
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | -- intersect: 1206669026.6852355
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | intersect: 1206669026.6852355
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | chi2: 0.0012599789242906704
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | -- intersect: 1206669026.6852355
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | current memory leak: -0.69 B/s (using 49 data points, chi2=0.00)
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | could have reported an average CPU frequency of 3758 MHz (5 samples)
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | ..............................
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | . Timing measurements:
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | . get job = 0 s
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | . initial setup = 2 s
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | . payload setup = 5 s
[2025-07-26 13:42:17] 2025-07-26 17:41:43,842 | INFO     | . stage-in = 0 s
[2025-07-26 13:42:17] 2025-07-26 17:41:43,843 | INFO     | . payload execution = 3397 s
[2025-07-26 13:42:17] 2025-07-26 17:41:43,843 | INFO     | . stage-out = 0 s
[2025-07-26 13:42:17] 2025-07-26 17:41:43,843 | INFO     | . log creation = 0 s
[2025-07-26 13:42:17] 2025-07-26 17:41:43,843 | INFO     | ..............................
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | 
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | job summary report
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | --------------------------------------------------
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | PanDA job id: 6745133920
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | task id: 45743349
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | errors: (none)
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | pilot state: finished 
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | transexitcode: 0
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | exeerrorcode: 0
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | exeerrordiag: 
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | exitcode: 0
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | exitmsg: OK
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | cpuconsumptiontime: 25269 s
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | nevents: 400
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | neventsw: 0
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | pid: 4033094
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | pgrp: 4033094
[2025-07-26 13:42:17] 2025-07-26 17:41:43,902 | INFO     | corecount: 8
[2025-07-26 13:42:17] 2025-07-26 17:41:43,903 | INFO     | event service: False
[2025-07-26 13:42:17] 2025-07-26 17:41:43,903 | INFO     | sizes: {0: 2397305, 1: 2397504, 4: 2397766, 11: 2397794, 3406: 2423472, 3407: 2423471, 3408: 2432655, 3410: 2432711, 3416: 2432937}
[2025-07-26 13:42:17] 2025-07-26 17:41:43,903 | INFO     | --------------------------------------------------
[2025-07-26 13:42:17] 2025-07-26 17:41:43,903 | INFO     | 
[2025-07-26 13:42:17] 2025-07-26 17:41:43,903 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-07-26 13:42:17] 2025-07-26 17:41:43,918 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:42:17] 2025-07-26 17:41:43,919 | INFO     | job 6745133920 has completed (purged errors)
[2025-07-26 13:42:17] 2025-07-26 17:41:43,920 | INFO     | overall cleanup function is called
[2025-07-26 13:42:17] 2025-07-26 17:41:44,926 | INFO     | --- collectZombieJob: --- 10, [4033094]
[2025-07-26 13:42:17] 2025-07-26 17:41:44,927 | INFO     | zombie collector waiting for pid 4033094
[2025-07-26 13:42:17] 2025-07-26 17:41:44,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:42:17] 2025-07-26 17:41:44,927 | INFO     | collected zombie processes
[2025-07-26 13:42:17] 2025-07-26 17:41:44,927 | INFO     | will attempt to kill all subprocesses of pid=4033094
[2025-07-26 13:42:17] 2025-07-26 17:41:45,270 | INFO     | process IDs to be killed: [4033094] (in reverse order)
[2025-07-26 13:42:17] 2025-07-26 17:41:45,385 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:42:17] 2025-07-26 17:41:45,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:42:17] 2025-07-26 17:41:45,400 | INFO     | did not find any defunct processes belonging to 4033094
[2025-07-26 13:42:17] 2025-07-26 17:41:45,417 | INFO     | did not find any defunct processes belonging to 4033094
[2025-07-26 13:42:17] 2025-07-26 17:41:45,417 | INFO     | ready for new job
[2025-07-26 13:42:17] 2025-07-26 17:41:45,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:42:17] 2025-07-26 17:41:45,418 | INFO     | ***************************************
[2025-07-26 13:42:17] 2025-07-26 17:41:45,418 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:42:17] 2025-07-26 17:41:45,418 | INFO     | ***************************************
[2025-07-26 13:42:17] 2025-07-26 17:41:45,418 | INFO     | 
[2025-07-26 13:42:17] 2025-07-26 17:41:45,423 | INFO     | architecture information:
[2025-07-26 13:42:17] 2025-07-26 17:41:45,423 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:42:17] 2025-07-26 17:41:45,436 | INFO     | cat /etc/os-release:
[2025-07-26 13:42:17] NAME="CentOS Linux"
[2025-07-26 13:42:17] VERSION="7 (Core)"
[2025-07-26 13:42:17] ID="centos"
[2025-07-26 13:42:17] ID_LIKE="rhel fedora"
[2025-07-26 13:42:17] VERSION_ID="7"
[2025-07-26 13:42:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:42:17] ANSI_COLOR="0;31"
[2025-07-26 13:42:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:42:17] HOME_URL="https://www.centos.org/"
[2025-07-26 13:42:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:42:17] 
[2025-07-26 13:42:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:42:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:42:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:42:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:42:17] 
[2025-07-26 13:42:17] 2025-07-26 17:41:45,437 | INFO     | ***************************************
[2025-07-26 13:42:17] 2025-07-26 17:41:45,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-07-26 13:42:17] 2025-07-26 17:41:45,953 | INFO     | sufficient remaining disk space (166573637632 B)
[2025-07-26 13:42:17] 2025-07-26 17:41:45,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:42:17] 2025-07-26 17:41:45,953 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:42:17] 2025-07-26 17:41:45,953 | INFO     | update_server=False
[2025-07-26 13:42:17] 2025-07-26 17:41:45,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:42:17] 2025-07-26 17:41:46,066 | INFO     | all job control threads have been joined
[2025-07-26 13:42:17] 2025-07-26 17:41:46,711 | INFO     | all data control threads have been joined
[2025-07-26 13:42:17] 2025-07-26 17:41:46,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:42:17] 2025-07-26 17:41:46,743 | INFO     | aborting loop
[2025-07-26 13:42:17] 2025-07-26 17:41:46,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:42:17] 2025-07-26 17:41:46,810 | INFO     | all payload control threads have been joined
[2025-07-26 13:42:17] 2025-07-26 17:41:46,957 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:46,982 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,071 | INFO     | [job] control thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,418 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,630 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,638 | INFO     | [job] validate thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,716 | INFO     | [data] control thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,748 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,748 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,816 | INFO     | [payload] control thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:47,849 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:48,275 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:48,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:42:17] 2025-07-26 17:41:48,775 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:48,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:42:17] 2025-07-26 17:41:49,921 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:52,347 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:56,849 | INFO     | job.realtimelogging is not enabled
[2025-07-26 13:42:17] 2025-07-26 17:41:57,854 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:42:17] 2025-07-26 17:41:58,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652721399616)>', '<ExcThread(monitor, started 140651857442560)>']
[2025-07-26 13:42:17] 2025-07-26 17:42:03,802 | INFO     | all workflow threads have been joined
[2025-07-26 13:42:17] 2025-07-26 17:42:03,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:42:17] 2025-07-26 17:42:03,802 | INFO     | traces error code: 0
[2025-07-26 13:42:17] 2025-07-26 17:42:03,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:42:17] 2025-07-26 17:42:16,920 | INFO     | PID=4015208 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 13:42:17] 2025-07-26 17:42:16,921 | INFO     | .. there are 16 such processes running
[2025-07-26 13:42:17] 2025-07-26 17:42:16,921 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:42:17] 2025-07-26 17:42:16,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:42:17] 2025-07-26 17:42:16,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:42:17] 2025-07-26 17:42:16,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:42:17] 2025-07-26 17:42:16,921 | INFO     | [monitor] control thread has ended
[2025-07-26 13:42:17] 2025-07-26 17:42:17,000 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:42:17] 2025-07-26 17:42:17,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:42:17] 2025-07-26 17:42:17,005 [wrapper] pilotpid: 4015208
[2025-07-26 13:42:17] 2025-07-26 17:42:17,007 [wrapper] Pilot exit status: 0
[2025-07-26 13:42:17] 2025-07-26 17:42:17,018 [wrapper] pandaids: 6745133920
[2025-07-26 13:42:17] 2025-07-26 17:42:17,103 [wrapper] cleanup supervisor_pilot   88389 4015209
[2025-07-26 13:42:17] 2025-07-26 17:42:17,106 [wrapper] Test setup, not cleaning
[2025-07-26 13:42:17] 2025-07-26 17:42:17,108 [wrapper] apfmon messages muted
[2025-07-26 13:42:17] 2025-07-26 17:42:17,111 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:42:17] 2025-07-26 17:42:17,114 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:42:17]  *** Error codes and diagnostics ***
[2025-07-26 13:42:17]     "exeErrorCode": 0,
[2025-07-26 13:42:17]     "exeErrorDiag": "",
[2025-07-26 13:42:17]     "pilotErrorCode": 0,
[2025-07-26 13:42:17]     "pilotErrorDiag": "",
[2025-07-26 13:42:17]  *** Listing of results directory ***
[2025-07-26 13:42:17] total 361064
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 07:03 pilot3.tar.gz
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 07:14 queuedata.json
[2025-07-26 13:42:17] -rwx------. 1 boincer umatlas     36292 Jul 26 07:15 runpilot2-wrapper.sh
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas       100 Jul 26 12:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:42:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 12:44 run_atlas
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas       105 Jul 26 12:44 job.xml
[2025-07-26 13:42:17] -rw-r--r--. 2 boincer umatlas 147021747 Jul 26 12:44 EVNT.45743347._002108.pool.root.1
[2025-07-26 13:42:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:44 start_atlas.sh
[2025-07-26 13:42:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 12:44 shared
[2025-07-26 13:42:17] -rw-r--r--. 2 boincer umatlas    542903 Jul 26 12:44 input.tar.gz
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas         0 Jul 26 12:44 boinc_lockfile
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 12:44 pandaJob.out
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas    980117 Jul 26 12:44 agis_schedconf.cvmfs.json
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas   1593052 Jul 26 12:44 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:42:17] drwx------. 4 boincer umatlas      4096 Jul 26 12:44 pilot3
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 13:37 init_data.xml
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas 217531643 Jul 26 13:41 HITS.45743349._036922.pool.root.1
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas       529 Jul 26 13:41 boinc_task_state.xml
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas      1028 Jul 26 13:41 memory_monitor_summary.json
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas    296084 Jul 26 13:41 log.45743349._036922.job.log.tgz.1
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas      7765 Jul 26 13:41 heartbeat.json
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas        95 Jul 26 13:41 pilot_heartbeat.json
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas       823 Jul 26 13:42 pilotlog.txt
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 13:42 boinc_mmap_file
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas        27 Jul 26 13:42 wrapper_checkpoint.txt
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas    352602 Jul 26 13:42 log.45743349._036922.job.log.1
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas       357 Jul 26 13:42 output.list
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas       620 Jul 26 13:42 runtime_log
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas    665600 Jul 26 13:42 result.tar.gz
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas       651 Jul 26 13:42 yl5NDmu2rz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFf0KDmOcTJjm.diag
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas      8674 Jul 26 13:42 runtime_log.err
[2025-07-26 13:42:17] -rw-r--r--. 1 boincer umatlas     21920 Jul 26 13:42 stderr.txt
[2025-07-26 13:42:17] HITS file was successfully produced:
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas 217531643 Jul 26 13:41 shared/HITS.pool.root.1
[2025-07-26 13:42:17]  *** Contents of shared directory: ***
[2025-07-26 13:42:17] total 357220
[2025-07-26 13:42:17] -rw-r--r--. 2 boincer umatlas 147021747 Jul 26 12:44 ATLAS.root_0
[2025-07-26 13:42:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:44 start_atlas.sh
[2025-07-26 13:42:17] -rw-r--r--. 2 boincer umatlas    542903 Jul 26 12:44 input.tar.gz
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas 217531643 Jul 26 13:41 HITS.pool.root.1
[2025-07-26 13:42:17] -rw-------. 1 boincer umatlas    665600 Jul 26 13:42 result.tar.gz
13:42:18 (4009365): run_atlas exited; CPU time 25350.175930
13:42:18 (4009365): called boinc_finish(0)

</stderr_txt>
]]>

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