Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:32:22 (20905): wrapper (7.7.26015): starting
12:32:22 (20905): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 12:32:22] Arguments: --nthreads 8
[2025-07-26 12:32:22] Threads: 8
[2025-07-26 12:32:22] Checking for CVMFS
[2025-07-26 12:32:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 12:32:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 12:32:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 12:32:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 12:32:22] 2.13.1.0 285388 7179 93148 148783 2 188 10946781 40960001 12923 16776704 0 94700135 99.999 291099 29877 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 12:32:22] CVMFS is ok
[2025-07-26 12:32:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 12:32:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 12:32:22] Further information can be found at the LHC@home message board.
[2025-07-26 12:32:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 12:32:22] Checking for apptainer binary...
[2025-07-26 12:32:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 12:32:22] Running /usr/bin/apptainer --version
[2025-07-26 12:32:22] apptainer version 1.4.1-1.el9
[2025-07-26 12:32:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 12:32:22] c-208-36.aglt2.org
[2025-07-26 12:32:22] apptainer works
[2025-07-26 12:32:22] Set ATHENA_PROC_NUMBER=8
[2025-07-26 12:32:22] Set ATHENA_CORE_NUMBER=8
[2025-07-26 12:32:22] Starting ATLAS job with PandaID=6745133927
[2025-07-26 12:32:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:25:59]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:25:59] ]
[2025-07-26 13:25:59] 2025-07-26 17:25:36,533 | INFO     | transferring file log.45743349._036929.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6745133927/log.45743349._036929.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 13:25:59] 2025-07-26 17:25:36,533 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6745133927/log.45743349._036929.job.log.tgz.1 /tmp/boinchome/slots/4/log.45743349._036929.job
[2025-07-26 13:25:59] 2025-07-26 17:25:36,550 | INFO     | adding to output.list: log.45743349._036929.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/2f/log.45743349._036929.job.log.tg
[2025-07-26 13:25:59] 2025-07-26 17:25:36,551 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 13:25:59] 2025-07-26 17:25:36,551 | INFO     | summary of transferred files:
[2025-07-26 13:25:59] 2025-07-26 17:25:36,551 | INFO     |  -- lfn=log.45743349._036929.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 13:25:59] 2025-07-26 17:25:36,551 | INFO     | stage-out finished correctly
[2025-07-26 13:25:59] 2025-07-26 17:25:37,518 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 13:25:59] 2025-07-26 17:25:38,189 | INFO     | job 6745133927 has state=finished
[2025-07-26 13:25:59] 2025-07-26 17:25:38,189 | INFO     | preparing for final server update for job 6745133927 in state='finished'
[2025-07-26 13:25:59] 2025-07-26 17:25:38,190 | INFO     | this job has now completed (state=finished)
[2025-07-26 13:25:59] 2025-07-26 17:25:38,190 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 13:25:59] 2025-07-26 17:25:38,190 | INFO     | log transfer has been attempted: DONE
[2025-07-26 13:25:59] 2025-07-26 17:25:38,190 | INFO     | job 6745133927 has finished - writing final server update
[2025-07-26 13:25:59] 2025-07-26 17:25:38,190 | INFO     | total number of processed events: 400 (read)
[2025-07-26 13:25:59] 2025-07-26 17:25:38,191 | INFO     | executing command: lscpu
[2025-07-26 13:25:59] 2025-07-26 17:25:38,246 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 13:25:59] 2025-07-26 17:25:39,199 | WARNING  | process 31008 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 13:25:59] 2025-07-26 17:25:39,199 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6745133927/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:25:59] 2025-07-26 17:25:39,200 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6745133927/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:25:59] 2025-07-26 17:25:39,200 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3016473 B
[2025-07-26 13:25:59] 2025-07-26 17:25:39,200 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15917 B
[2025-07-26 13:25:59] 2025-07-26 17:25:39,201 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-07-26 13:25:59] 2025-07-26 17:25:40,014 | INFO     | 3190s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-26 13:25:59] 2025-07-26 17:25:41,983 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 13:25:59] 2025-07-26 17:25:41,992 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.3250703125004
[2025-07-26 13:25:59] 2025-07-26 17:25:41,998 | INFO     | sufficient remaining disk space (166750846976 B)
[2025-07-26 13:25:59] 2025-07-26 17:25:41,999 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,000 | INFO     | size of work directory /tmp/boinchome/slots/4/PanDA_Pilot-6745133927: 3305980 B (within 2537553920 B limit)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,001 | INFO     | pfn file=/tmp/boinchome/slots/4/PanDA_Pilot-6745133927/HITS.45743349._036929.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,001 | INFO     | total size of present files: 0 B (workdir size: 3305980 B)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,001 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/4/PanDA_Pilot-6745133927/HITS.45743349._036929.pool.root.1 since it does not exist
[2025-07-26 13:25:59] 2025-07-26 17:25:42,009 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6745133927/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,010 | INFO     | extracted standard info from prmon json
[2025-07-26 13:25:59] 2025-07-26 17:25:42,010 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 13:25:59] 2025-07-26 17:25:42,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:25:59] 2025-07-26 17:25:42,011 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:25:59] 2025-07-26 17:25:42,011 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:25:59] 2025-07-26 17:25:42,012 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:25:59] 2025-07-26 17:25:42,012 | INFO     | sum of square deviations: 28242390.0
[2025-07-26 13:25:59] 2025-07-26 17:25:42,012 | INFO     | sum of deviations: -361108044.0
[2025-07-26 13:25:59] 2025-07-26 17:25:42,012 | INFO     | mean x: 1753549223.0
[2025-07-26 13:25:59] 2025-07-26 17:25:42,012 | INFO     | mean y: 2544389.7555555557
[2025-07-26 13:25:59] 2025-07-26 17:25:42,012 | INFO     | -- intersect: 22423477249.02312
[2025-07-26 13:25:59] 2025-07-26 17:25:42,012 | INFO     | intersect: 22423477249.02312
[2025-07-26 13:25:59] 2025-07-26 17:25:42,012 | INFO     | chi2: 0.0006122112806447751
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | -- intersect: 22423477249.02312
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | current memory leak: -12.79 B/s (using 45 data points, chi2=0.00)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | could have reported an average CPU frequency of 3776 MHz (5 samples)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | ..............................
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | . Timing measurements:
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | . get job = 0 s
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | . initial setup = 2 s
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | . payload setup = 5 s
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | . stage-in = 0 s
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | . payload execution = 3160 s
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | . stage-out = 0 s
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | . log creation = 0 s
[2025-07-26 13:25:59] 2025-07-26 17:25:42,013 | INFO     | ..............................
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | 
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | job summary report
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | --------------------------------------------------
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | PanDA job id: 6745133927
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | task id: 45743349
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | errors: (none)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | pilot state: finished 
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | transexitcode: 0
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | exeerrorcode: 0
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | exeerrordiag: 
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | exitcode: 0
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | exitmsg: OK
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | cpuconsumptiontime: 23713 s
[2025-07-26 13:25:59] 2025-07-26 17:25:42,075 | INFO     | nevents: 400
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | neventsw: 0
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | pid: 31008
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | pgrp: 31008
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | corecount: 8
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | event service: False
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 3169: 2423260, 3170: 2423259, 3171: 2432313, 3172: 2432497, 3176: 2432751}
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | --------------------------------------------------
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | 
[2025-07-26 13:25:59] 2025-07-26 17:25:42,076 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-07-26 13:25:59] 2025-07-26 17:25:42,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,096 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,096 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | job 6745133927 has completed (purged errors)
[2025-07-26 13:25:59] 2025-07-26 17:25:42,097 | INFO     | overall cleanup function is called
[2025-07-26 13:25:59] 2025-07-26 17:25:42,411 | INFO     | number of running child processes to parent process 31008: 1
[2025-07-26 13:25:59] 2025-07-26 17:25:42,411 | INFO     | maximum number of monitored processes: 6
[2025-07-26 13:25:59] 2025-07-26 17:25:42,411 | INFO     | aborting job monitoring since job object (job id=6745133927) has expired
[2025-07-26 13:25:59] 2025-07-26 17:25:43,106 | INFO     | --- collectZombieJob: --- 10, [31008]
[2025-07-26 13:25:59] 2025-07-26 17:25:43,106 | INFO     | zombie collector waiting for pid 31008
[2025-07-26 13:25:59] 2025-07-26 17:25:43,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:25:59] 2025-07-26 17:25:43,106 | INFO     | collected zombie processes
[2025-07-26 13:25:59] 2025-07-26 17:25:43,106 | INFO     | will attempt to kill all subprocesses of pid=31008
[2025-07-26 13:25:59] 2025-07-26 17:25:44,196 | INFO     | PID=24517 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 13:25:59] 2025-07-26 17:25:44,196 | INFO     | .. there are 16 such processes running
[2025-07-26 13:25:59] 2025-07-26 17:25:44,222 | INFO     | process IDs to be killed: [31008] (in reverse order)
[2025-07-26 13:25:59] 2025-07-26 17:25:44,337 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:25:59] 2025-07-26 17:25:44,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:25:59] 2025-07-26 17:25:44,353 | INFO     | did not find any defunct processes belonging to 31008
[2025-07-26 13:25:59] 2025-07-26 17:25:44,367 | INFO     | did not find any defunct processes belonging to 31008
[2025-07-26 13:25:59] 2025-07-26 17:25:44,367 | INFO     | ready for new job
[2025-07-26 13:25:59] 2025-07-26 17:25:44,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:25:59] 2025-07-26 17:25:44,368 | INFO     | ***************************************
[2025-07-26 13:25:59] 2025-07-26 17:25:44,368 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:25:59] 2025-07-26 17:25:44,368 | INFO     | ***************************************
[2025-07-26 13:25:59] 2025-07-26 17:25:44,368 | INFO     | 
[2025-07-26 13:25:59] 2025-07-26 17:25:44,373 | INFO     | architecture information:
[2025-07-26 13:25:59] 2025-07-26 17:25:44,373 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:25:59] 2025-07-26 17:25:44,389 | INFO     | cat /etc/os-release:
[2025-07-26 13:25:59] NAME="CentOS Linux"
[2025-07-26 13:25:59] VERSION="7 (Core)"
[2025-07-26 13:25:59] ID="centos"
[2025-07-26 13:25:59] ID_LIKE="rhel fedora"
[2025-07-26 13:25:59] VERSION_ID="7"
[2025-07-26 13:25:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:25:59] ANSI_COLOR="0;31"
[2025-07-26 13:25:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:25:59] HOME_URL="https://www.centos.org/"
[2025-07-26 13:25:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:25:59] 
[2025-07-26 13:25:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:25:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:25:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:25:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:25:59] 
[2025-07-26 13:25:59] 2025-07-26 17:25:44,390 | INFO     | ***************************************
[2025-07-26 13:25:59] 2025-07-26 17:25:44,892 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-07-26 13:25:59] 2025-07-26 17:25:44,908 | INFO     | sufficient remaining disk space (166755041280 B)
[2025-07-26 13:25:59] 2025-07-26 17:25:44,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:25:59] 2025-07-26 17:25:44,908 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:25:59] 2025-07-26 17:25:44,908 | INFO     | update_server=False
[2025-07-26 13:25:59] 2025-07-26 17:25:44,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:25:59] 2025-07-26 17:25:44,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:25:59] 2025-07-26 17:25:44,909 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 13:25:59] 2025-07-26 17:25:44,910 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:25:59] 2025-07-26 17:25:44,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:25:59] 2025-07-26 17:25:44,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:25:59] 2025-07-26 17:25:44,914 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 13:25:59] 2025-07-26 17:25:44,914 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 13:25:59] 2025-07-26 17:25:44,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:25:59] 2025-07-26 17:25:44,914 | INFO     | will abort loop
[2025-07-26 13:25:59] 2025-07-26 17:25:45,222 | INFO     | all job control threads have been joined
[2025-07-26 13:25:59] 2025-07-26 17:25:45,305 | INFO     | all data control threads have been joined
[2025-07-26 13:25:59] 2025-07-26 17:25:45,354 | INFO     | all payload control threads have been joined
[2025-07-26 13:25:59] 2025-07-26 17:25:45,911 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:45,919 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,042 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,227 | INFO     | [job] control thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,310 | INFO     | [data] control thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,359 | INFO     | [payload] control thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,535 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,538 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,881 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,915 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:46,954 | INFO     | [job] validate thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:47,076 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:47,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:25:59] 2025-07-26 17:25:47,215 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:47,281 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:48,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:25:59] 2025-07-26 17:25:48,090 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:52,088 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:25:59] 2025-07-26 17:25:53,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139650527074112)>', '<ExcThread(monitor, started 139650039535360)>']
[2025-07-26 13:25:59] 2025-07-26 17:25:53,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:25:59] 2025-07-26 17:25:53,946 | INFO     | [monitor] control thread has ended
[2025-07-26 13:25:59] 2025-07-26 17:25:58,833 | INFO     | all workflow threads have been joined
[2025-07-26 13:25:59] 2025-07-26 17:25:58,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:25:59] 2025-07-26 17:25:58,833 | INFO     | traces error code: 0
[2025-07-26 13:25:59] 2025-07-26 17:25:58,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:25:59] 2025-07-26 17:25:58,945 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:25:59] 2025-07-26 17:25:58,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:25:59] 2025-07-26 17:25:58,951 [wrapper] pilotpid: 24517
[2025-07-26 13:25:59] 2025-07-26 17:25:58,953 [wrapper] Pilot exit status: 0
[2025-07-26 13:25:59] 2025-07-26 17:25:58,962 [wrapper] pandaids: 6745133927
[2025-07-26 13:25:59] 2025-07-26 17:25:59,043 [wrapper] cleanup supervisor_pilot  336410 24518
[2025-07-26 13:25:59] 2025-07-26 17:25:59,046 [wrapper] Test setup, not cleaning
[2025-07-26 13:25:59] 2025-07-26 17:25:59,048 [wrapper] apfmon messages muted
[2025-07-26 13:25:59] 2025-07-26 17:25:59,051 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:25:59] 2025-07-26 17:25:59,053 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:25:59]  *** Error codes and diagnostics ***
[2025-07-26 13:25:59]     "exeErrorCode": 0,
[2025-07-26 13:25:59]     "exeErrorDiag": "",
[2025-07-26 13:25:59]     "pilotErrorCode": 0,
[2025-07-26 13:25:59]     "pilotErrorDiag": "",
[2025-07-26 13:25:59]  *** Listing of results directory ***
[2025-07-26 13:25:59] total 355548
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 07:03 pilot3.tar.gz
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 07:16 queuedata.json
[2025-07-26 13:25:59] -rwx------. 1 boincer umatlas     36292 Jul 26 07:18 runpilot2-wrapper.sh
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas       100 Jul 26 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:25:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 12:32 run_atlas
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas       105 Jul 26 12:32 job.xml
[2025-07-26 13:25:59] -rw-r--r--. 2 boincer umatlas 147274042 Jul 26 12:32 EVNT.45743347._002109.pool.root.1
[2025-07-26 13:25:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:32 start_atlas.sh
[2025-07-26 13:25:59] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 12:32 shared
[2025-07-26 13:25:59] -rw-r--r--. 2 boincer umatlas    542903 Jul 26 12:32 input.tar.gz
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas         0 Jul 26 12:32 boinc_lockfile
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 12:32 pandaJob.out
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas    980117 Jul 26 12:32 agis_schedconf.cvmfs.json
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas   1593052 Jul 26 12:32 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:25:59] drwx------. 4 boincer umatlas      4096 Jul 26 12:32 pilot3
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 13:19 init_data.xml
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas 211702482 Jul 26 13:25 HITS.45743349._036929.pool.root.1
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas       529 Jul 26 13:25 boinc_task_state.xml
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas      1026 Jul 26 13:25 memory_monitor_summary.json
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas    282279 Jul 26 13:25 log.45743349._036929.job.log.tgz.1
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas        95 Jul 26 13:25 pilot_heartbeat.json
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas      7780 Jul 26 13:25 heartbeat.json
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas        27 Jul 26 13:25 wrapper_checkpoint.txt
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 13:25 boinc_mmap_file
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas      4667 Jul 26 13:25 pilotlog.txt
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas    331318 Jul 26 13:25 log.45743349._036929.job.log.1
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas       357 Jul 26 13:25 output.list
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas       620 Jul 26 13:25 runtime_log
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas    634880 Jul 26 13:25 result.tar.gz
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas       651 Jul 26 13:25 tUrLDm15rz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9xRLDmAVqRDn.diag
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 13:25 runtime_log.err
[2025-07-26 13:25:59] -rw-r--r--. 1 boincer umatlas     22677 Jul 26 13:25 stderr.txt
[2025-07-26 13:25:59] HITS file was successfully produced:
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas 211702482 Jul 26 13:25 shared/HITS.pool.root.1
[2025-07-26 13:25:59]  *** Contents of shared directory: ***
[2025-07-26 13:25:59] total 351740
[2025-07-26 13:25:59] -rw-r--r--. 2 boincer umatlas 147274042 Jul 26 12:32 ATLAS.root_0
[2025-07-26 13:25:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:32 start_atlas.sh
[2025-07-26 13:25:59] -rw-r--r--. 2 boincer umatlas    542903 Jul 26 12:32 input.tar.gz
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas 211702482 Jul 26 13:25 HITS.pool.root.1
[2025-07-26 13:25:59] -rw-------. 1 boincer umatlas    634880 Jul 26 13:25 result.tar.gz
13:26:00 (20905): run_atlas exited; CPU time 23784.689806
13:26:00 (20905): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN