Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:32:55 (14802): wrapper (7.7.26015): starting
12:32:55 (14802): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 12:32:55] Arguments: --nthreads 8
[2025-07-26 12:32:55] Threads: 8
[2025-07-26 12:32:55] Checking for CVMFS
[2025-07-26 12:32:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 12:32:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 12:32:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 12:32:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 12:32:56] 2.11.2.0 2944 110736 105760 148783 2 58 12355010 20275200 1 130560 0 29070427 99.952 11112305 11091 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 12:32:56] CVMFS is ok
[2025-07-26 12:32:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 12:32:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 12:32:56] Further information can be found at the LHC@home message board.
[2025-07-26 12:32:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 12:32:56] Checking for apptainer binary...
[2025-07-26 12:32:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 12:32:56] Running /usr/bin/apptainer --version
[2025-07-26 12:32:56] apptainer version 1.3.2-1.el7
[2025-07-26 12:32:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 12:32:58] c-204-38.aglt2.org
[2025-07-26 12:32:58] apptainer works
[2025-07-26 12:32:58] Set ATHENA_PROC_NUMBER=8
[2025-07-26 12:32:58] Set ATHENA_CORE_NUMBER=8
[2025-07-26 12:32:58] Starting ATLAS job with PandaID=6745133715
[2025-07-26 12:32:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:27:34 (10105): wrapper (7.7.26015): starting
14:27:34 (10105): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 14:27:34] Arguments: --nthreads 8
[2025-07-26 14:27:34] Threads: 8
[2025-07-26 14:27:34] This job has been restarted, cleaning up previous attempt
[2025-07-26 14:27:34] Checking for CVMFS
[2025-07-26 14:27:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 14:27:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 14:27:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 14:27:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 14:27:35] 2.11.2.0 2944 110850 105496 148786 0 9 12365007 20275200 1 130560 0 29149965 99.952 11116278 11094 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 14:27:35] CVMFS is ok
[2025-07-26 14:27:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 14:27:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 14:27:35] Further information can be found at the LHC@home message board.
[2025-07-26 14:27:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 14:27:35] Checking for apptainer binary...
[2025-07-26 14:27:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 14:27:35] Running /usr/bin/apptainer --version
[2025-07-26 14:27:35] apptainer version 1.3.2-1.el7
[2025-07-26 14:27:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 14:27:37] c-204-38.aglt2.org
[2025-07-26 14:27:37] apptainer works
[2025-07-26 14:27:37] Set ATHENA_PROC_NUMBER=8
[2025-07-26 14:27:37] Set ATHENA_CORE_NUMBER=8
[2025-07-26 14:27:37] Starting ATLAS job with PandaID=6745133715
[2025-07-26 14:27:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:46:41 (5006): wrapper (7.7.26015): starting
14:46:41 (5006): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 14:46:41] Arguments: --nthreads 8
[2025-07-26 14:46:41] Threads: 8
[2025-07-26 14:46:41] This job has been restarted, cleaning up previous attempt
[2025-07-26 14:46:41] Checking for CVMFS
[2025-07-26 14:46:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 14:46:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 14:46:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 14:46:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 14:46:41] 2.11.2.0 2944 110870 106328 148786 1 188 12366149 20275201 1 130560 0 29212321 99.952 11116348 11094 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 14:46:41] CVMFS is ok
[2025-07-26 14:46:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 14:46:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 14:46:41] Further information can be found at the LHC@home message board.
[2025-07-26 14:46:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 14:46:41] Checking for apptainer binary...
[2025-07-26 14:46:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 14:46:41] Running /usr/bin/apptainer --version
[2025-07-26 14:46:41] apptainer version 1.3.2-1.el7
[2025-07-26 14:46:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 14:46:43] c-204-38.aglt2.org
[2025-07-26 14:46:43] apptainer works
[2025-07-26 14:46:43] Set ATHENA_PROC_NUMBER=8
[2025-07-26 14:46:43] Set ATHENA_CORE_NUMBER=8
[2025-07-26 14:46:43] Starting ATLAS job with PandaID=6745133715
[2025-07-26 14:46:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 17:12:22]  *** The last 200 lines of the pilot log: ***
[2025-07-26 17:12:22] 2025-07-26 21:12:02,215 | INFO     | PID=8703 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 17:12:22] 2025-07-26 21:12:03,323 | INFO     | monitor loop #642: job 0:6745133715 is in state 'finished'
[2025-07-26 17:12:22] 2025-07-26 21:12:03,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:12:22] 2025-07-26 21:12:05,826 | INFO     | monitor loop #643: job 0:6745133715 is in state 'finished'
[2025-07-26 17:12:22] 2025-07-26 21:12:05,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,171 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 17:12:22] 2025-07-26 21:12:07,174 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-26 17:12:22] 2025-07-26 21:12:07,176 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745133715/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,176 | INFO     | extracted standard info from prmon json
[2025-07-26 17:12:22] 2025-07-26 21:12:07,176 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 17:12:22] 2025-07-26 21:12:07,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 17:12:22] 2025-07-26 21:12:07,177 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 17:12:22] 2025-07-26 21:12:07,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 17:12:22] 2025-07-26 21:12:07,179 | INFO     | fitting pss+swap vs Time
[2025-07-26 17:12:22] 2025-07-26 21:12:07,180 | INFO     | sum of square deviations: 887813855.5
[2025-07-26 17:12:22] 2025-07-26 21:12:07,181 | INFO     | sum of deviations: 3701049004.5000005
[2025-07-26 17:12:22] 2025-07-26 21:12:07,181 | INFO     | mean x: 1753559953.5
[2025-07-26 17:12:22] 2025-07-26 21:12:07,181 | INFO     | mean y: 2513821.9225352113
[2025-07-26 17:12:22] 2025-07-26 21:12:07,181 | INFO     | -- intersect: -7307589844.546142
[2025-07-26 17:12:22] 2025-07-26 21:12:07,181 | INFO     | intersect: -7307589844.546142
[2025-07-26 17:12:22] 2025-07-26 21:12:07,181 | INFO     | chi2: 1.555942934447326
[2025-07-26 17:12:22] 2025-07-26 21:12:07,182 | INFO     | sum of square deviations: 797291228.0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,182 | INFO     | sum of deviations: 3640953787.000006
[2025-07-26 17:12:22] 2025-07-26 21:12:07,183 | INFO     | mean x: 1753559801.0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,183 | INFO     | mean y: 2513720.7518248176
[2025-07-26 17:12:22] 2025-07-26 21:12:07,183 | INFO     | -- intersect: -8005388503.630766
[2025-07-26 17:12:22] 2025-07-26 21:12:07,183 | INFO     | intersect: -8005388503.630766
[2025-07-26 17:12:22] 2025-07-26 21:12:07,183 | INFO     | chi2: 1.557036299565826
[2025-07-26 17:12:22] 2025-07-26 21:12:07,183 | INFO     | current chi2=1.557036299565826 (change=-0.07027025826551132 %)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,183 | INFO     | right removable region: 136
[2025-07-26 17:12:22] 2025-07-26 21:12:07,184 | INFO     | sum of square deviations: 797291228.0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,184 | INFO     | sum of deviations: -17205224338.0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,184 | INFO     | mean x: 1753560106.0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,185 | INFO     | mean y: 2548458.5474452553
[2025-07-26 17:12:22] 2025-07-26 21:12:07,185 | INFO     | -- intersect: 37843670942.20917
[2025-07-26 17:12:22] 2025-07-26 21:12:07,185 | INFO     | intersect: 37843670942.20917
[2025-07-26 17:12:22] 2025-07-26 21:12:07,185 | INFO     | chi2: 0.12135519597255454
[2025-07-26 17:12:22] 2025-07-26 21:12:07,185 | INFO     | current chi2=0.12135519597255454 (change=92.20053683937579 %)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,186 | INFO     | sum of square deviations: 713140813.0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,186 | INFO     | sum of deviations: -14953432365.500002
[2025-07-26 17:12:22] 2025-07-26 21:12:07,186 | INFO     | mean x: 1753560258.5
[2025-07-26 17:12:22] 2025-07-26 21:12:07,186 | INFO     | mean y: 2544299.3863636362
[2025-07-26 17:12:22] 2025-07-26 21:12:07,187 | INFO     | -- intersect: 36771923146.18145
[2025-07-26 17:12:22] 2025-07-26 21:12:07,187 | INFO     | intersect: 36771923146.18145
[2025-07-26 17:12:22] 2025-07-26 21:12:07,187 | INFO     | chi2: 0.10998662435996968
[2025-07-26 17:12:22] 2025-07-26 21:12:07,187 | INFO     | current chi2=0.10998662435996968 (change=9.368013888054655 %)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,187 | INFO     | left removable region: 20
[2025-07-26 17:12:22] 2025-07-26 21:12:07,188 | INFO     | sum of square deviations: 483971865.0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,188 | INFO     | sum of deviations: -6006946421.5
[2025-07-26 17:12:22] 2025-07-26 21:12:07,188 | INFO     | mean x: 1753560380.5
[2025-07-26 17:12:22] 2025-07-26 21:12:07,189 | INFO     | mean y: 2527031.75
[2025-07-26 17:12:22] 2025-07-26 21:12:07,189 | INFO     | -- intersect: 21767311339.054005
[2025-07-26 17:12:22] 2025-07-26 21:12:07,189 | INFO     | intersect: 21767311339.054005
[2025-07-26 17:12:22] 2025-07-26 21:12:07,189 | INFO     | chi2: 0.07143135222498587
[2025-07-26 17:12:22] 2025-07-26 21:12:07,189 | INFO     | -- intersect: 21767311339.054005
[2025-07-26 17:12:22] 2025-07-26 21:12:07,189 | INFO     | current memory leak: -12.41 B/s (using 116 data points, chi2=0.07)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,190 | INFO     | could have reported an average CPU frequency of 1993 MHz (8 samples)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,190 | INFO     | ..............................
[2025-07-26 17:12:22] 2025-07-26 21:12:07,190 | INFO     | . Timing measurements:
[2025-07-26 17:12:22] 2025-07-26 21:12:07,190 | INFO     | . get job = 0 s
[2025-07-26 17:12:22] 2025-07-26 21:12:07,190 | INFO     | . initial setup = 1 s
[2025-07-26 17:12:22] 2025-07-26 21:12:07,190 | INFO     | . payload setup = 12 s
[2025-07-26 17:12:22] 2025-07-26 21:12:07,190 | INFO     | . stage-in = 0 s
[2025-07-26 17:12:22] 2025-07-26 21:12:07,191 | INFO     | . payload execution = 8667 s
[2025-07-26 17:12:22] 2025-07-26 21:12:07,191 | INFO     | . stage-out = 2 s
[2025-07-26 17:12:22] 2025-07-26 21:12:07,191 | INFO     | . log creation = 0 s
[2025-07-26 17:12:22] 2025-07-26 21:12:07,191 | INFO     | ..............................
[2025-07-26 17:12:22] 2025-07-26 21:12:07,282 | INFO     | 
[2025-07-26 17:12:22] 2025-07-26 21:12:07,283 | INFO     | job summary report
[2025-07-26 17:12:22] 2025-07-26 21:12:07,283 | INFO     | --------------------------------------------------
[2025-07-26 17:12:22] 2025-07-26 21:12:07,283 | INFO     | PanDA job id: 6745133715
[2025-07-26 17:12:22] 2025-07-26 21:12:07,283 | INFO     | task id: 45743349
[2025-07-26 17:12:22] 2025-07-26 21:12:07,283 | INFO     | errors: (none)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,284 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 17:12:22] 2025-07-26 21:12:07,284 | INFO     | pilot state: finished 
[2025-07-26 17:12:22] 2025-07-26 21:12:07,284 | INFO     | transexitcode: 0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,284 | INFO     | exeerrorcode: 0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,284 | INFO     | exeerrordiag: 
[2025-07-26 17:12:22] 2025-07-26 21:12:07,284 | INFO     | exitcode: 0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,285 | INFO     | exitmsg: OK
[2025-07-26 17:12:22] 2025-07-26 21:12:07,285 | INFO     | cpuconsumptiontime: 64633 s
[2025-07-26 17:12:22] 2025-07-26 21:12:07,285 | INFO     | nevents: 400
[2025-07-26 17:12:22] 2025-07-26 21:12:07,285 | INFO     | neventsw: 0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,285 | INFO     | pid: 15273
[2025-07-26 17:12:22] 2025-07-26 21:12:07,285 | INFO     | pgrp: 15273
[2025-07-26 17:12:22] 2025-07-26 21:12:07,286 | INFO     | corecount: 8
[2025-07-26 17:12:22] 2025-07-26 21:12:07,286 | INFO     | event service: False
[2025-07-26 17:12:22] 2025-07-26 21:12:07,286 | INFO     | sizes: {0: 2397304, 1: 2397503, 7: 2397765, 12: 2397793, 8683: 2425840, 8686: 2434838, 8687: 2435022, 8692: 2435216}
[2025-07-26 17:12:22] 2025-07-26 21:12:07,286 | INFO     | --------------------------------------------------
[2025-07-26 17:12:22] 2025-07-26 21:12:07,286 | INFO     | 
[2025-07-26 17:12:22] 2025-07-26 21:12:07,286 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 17:12:22] 2025-07-26 21:12:07,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 17:12:22] 2025-07-26 21:12:07,319 | INFO     | job 6745133715 has completed (purged errors)
[2025-07-26 17:12:22] 2025-07-26 21:12:07,319 | INFO     | overall cleanup function is called
[2025-07-26 17:12:22] 2025-07-26 21:12:08,327 | INFO     | --- collectZombieJob: --- 10, [15273]
[2025-07-26 17:12:22] 2025-07-26 21:12:08,328 | INFO     | zombie collector waiting for pid 15273
[2025-07-26 17:12:22] 2025-07-26 21:12:08,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 17:12:22] 2025-07-26 21:12:08,328 | INFO     | collected zombie processes
[2025-07-26 17:12:22] 2025-07-26 21:12:08,328 | INFO     | will attempt to kill all subprocesses of pid=15273
[2025-07-26 17:12:22] 2025-07-26 21:12:08,418 | INFO     | process IDs to be killed: [15273] (in reverse order)
[2025-07-26 17:12:22] 2025-07-26 21:12:08,476 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 17:12:22] 2025-07-26 21:12:08,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 17:12:22] 2025-07-26 21:12:08,481 | INFO     | did not find any defunct processes belonging to 15273
[2025-07-26 17:12:22] 2025-07-26 21:12:08,485 | INFO     | did not find any defunct processes belonging to 15273
[2025-07-26 17:12:22] 2025-07-26 21:12:08,485 | INFO     | ready for new job
[2025-07-26 17:12:22] 2025-07-26 21:12:08,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 17:12:22] 2025-07-26 21:12:08,487 | INFO     | ***************************************
[2025-07-26 17:12:22] 2025-07-26 21:12:08,487 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 17:12:22] 2025-07-26 21:12:08,487 | INFO     | ***************************************
[2025-07-26 17:12:22] 2025-07-26 21:12:08,487 | INFO     | 
[2025-07-26 17:12:22] 2025-07-26 21:12:08,488 | INFO     | architecture information:
[2025-07-26 17:12:22] 2025-07-26 21:12:08,488 | INFO     | executing command: cat /etc/os-release
[2025-07-26 17:12:22] 2025-07-26 21:12:08,506 | INFO     | cat /etc/os-release:
[2025-07-26 17:12:22] NAME="CentOS Linux"
[2025-07-26 17:12:22] VERSION="7 (Core)"
[2025-07-26 17:12:22] ID="centos"
[2025-07-26 17:12:22] ID_LIKE="rhel fedora"
[2025-07-26 17:12:22] VERSION_ID="7"
[2025-07-26 17:12:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 17:12:22] ANSI_COLOR="0;31"
[2025-07-26 17:12:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 17:12:22] HOME_URL="https://www.centos.org/"
[2025-07-26 17:12:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 17:12:22] 
[2025-07-26 17:12:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 17:12:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 17:12:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 17:12:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 17:12:22] 
[2025-07-26 17:12:22] 2025-07-26 21:12:08,506 | INFO     | ***************************************
[2025-07-26 17:12:22] 2025-07-26 21:12:09,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 17:12:22] 2025-07-26 21:12:09,027 | INFO     | sufficient remaining disk space (18706595840 B)
[2025-07-26 17:12:22] 2025-07-26 21:12:09,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 17:12:22] 2025-07-26 21:12:09,028 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 17:12:22] 2025-07-26 21:12:09,028 | INFO     | update_server=False
[2025-07-26 17:12:22] 2025-07-26 21:12:09,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 17:12:22] 2025-07-26 21:12:09,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:12:22] 2025-07-26 21:12:09,030 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 17:12:22] 2025-07-26 21:12:09,030 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 17:12:22] 2025-07-26 21:12:09,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 17:12:22] 2025-07-26 21:12:09,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 17:12:22] 2025-07-26 21:12:09,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 17:12:22] 2025-07-26 21:12:09,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:12:22] 2025-07-26 21:12:09,330 | INFO     | aborting loop
[2025-07-26 17:12:22] 2025-07-26 21:12:09,893 | INFO     | all data control threads have been joined
[2025-07-26 17:12:22] 2025-07-26 21:12:10,034 | INFO     | [job] retrieve thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:10,035 | INFO     | [job] queue monitor thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:10,205 | INFO     | all job control threads have been joined
[2025-07-26 17:12:22] 2025-07-26 21:12:10,263 | INFO     | all payload control threads have been joined
[2025-07-26 17:12:22] 2025-07-26 21:12:10,278 | INFO     | [payload] validate_post thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:10,336 | INFO     | [job] job monitor thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:10,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:10,727 | INFO     | [job] validate thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:10,866 | INFO     | [data] copytool_in thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:10,866 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:10,899 | INFO     | [data] control thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:11,000 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:11,145 | INFO     | [data] copytool_out thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:11,160 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:11,210 | INFO     | [job] control thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:11,266 | INFO     | [payload] control thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:11,346 | INFO     | [payload] failed_post thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:12,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 17:12:22] 2025-07-26 21:12:16,138 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 17:12:22] 2025-07-26 21:12:16,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066173413184)>', '<ExcThread(monitor, started 140065049143040)>']
[2025-07-26 17:12:22] 2025-07-26 21:12:17,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 17:12:22] 2025-07-26 21:12:17,072 | INFO     | [monitor] control thread has ended
[2025-07-26 17:12:22] 2025-07-26 21:12:21,656 | INFO     | all workflow threads have been joined
[2025-07-26 17:12:22] 2025-07-26 21:12:21,656 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 17:12:22] 2025-07-26 21:12:21,657 | INFO     | traces error code: 0
[2025-07-26 17:12:22] 2025-07-26 21:12:21,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 17:12:22] 2025-07-26 21:12:21,775 [wrapper] ==== pilot stdout END ====
[2025-07-26 17:12:22] 2025-07-26 21:12:21,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 17:12:22] 2025-07-26 21:12:21,784 [wrapper] pilotpid: 8703
[2025-07-26 17:12:22] 2025-07-26 21:12:21,788 [wrapper] Pilot exit status: 0
[2025-07-26 17:12:22] 2025-07-26 21:12:21,808 [wrapper] pandaids: 6745133715 6745133715 6745133715
[2025-07-26 17:12:22] 2025-07-26 21:12:21,852 [wrapper] cleanup supervisor_pilot 19874 8704
[2025-07-26 17:12:22] 2025-07-26 21:12:21,857 [wrapper] Test setup, not cleaning
[2025-07-26 17:12:22] 2025-07-26 21:12:21,862 [wrapper] apfmon messages muted
[2025-07-26 17:12:22] 2025-07-26 21:12:21,866 [wrapper] ==== wrapper stdout END ====
[2025-07-26 17:12:22] 2025-07-26 21:12:21,870 [wrapper] ==== wrapper stderr END ====
[2025-07-26 17:12:22]  *** Error codes and diagnostics ***
[2025-07-26 17:12:22]     "exeErrorCode": 0,
[2025-07-26 17:12:22]     "exeErrorDiag": "",
[2025-07-26 17:12:22]     "pilotErrorCode": 0,
[2025-07-26 17:12:22]     "pilotErrorDiag": "",
[2025-07-26 17:12:22]  *** Listing of results directory ***
[2025-07-26 17:12:22] total 492740
[2025-07-26 17:12:22] drwx------ 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 07:03 pilot3.tar.gz
[2025-07-26 17:12:22] -rwx------ 1 boincer umatlas     36292 Jul 26 07:06 runpilot2-wrapper.sh
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 07:06 queuedata.json
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas       100 Jul 26 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 17:12:22] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 12:32 run_atlas
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas       105 Jul 26 12:32 job.xml
[2025-07-26 17:12:22] -rw-r--r-- 3 boincer umatlas 145772314 Jul 26 12:32 EVNT.45743347._002095.pool.root.1
[2025-07-26 17:12:22] -rw-r--r-- 3 boincer umatlas 145772314 Jul 26 12:32 ATLAS.root_0
[2025-07-26 17:12:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 12:32 start_atlas.sh
[2025-07-26 17:12:22] drwxrwx--x 2 boincer umatlas      4096 Jul 26 12:32 shared
[2025-07-26 17:12:22] -rw-r--r-- 2 boincer umatlas    542891 Jul 26 12:32 input.tar.gz
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas         0 Jul 26 12:32 boinc_lockfile
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 14:46 pandaJob.out
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas    980125 Jul 26 14:46 agis_schedconf.cvmfs.json
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas      5906 Jul 26 17:01 init_data.xml
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas 206890458 Jul 26 17:11 HITS.45743349._036717.pool.root.1
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas       532 Jul 26 17:11 boinc_task_state.xml
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas      1047 Jul 26 17:11 memory_monitor_summary.json
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas   1593052 Jul 26 17:12 agis_ddmendpoints.agis.ALL.json
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas    335142 Jul 26 17:12 log.45743349._036717.job.log.tgz.1
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas        96 Jul 26 17:12 pilot_heartbeat.json
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas      7838 Jul 26 17:12 heartbeat.json
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 17:12 boinc_mmap_file
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas        29 Jul 26 17:12 wrapper_checkpoint.txt
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas      4480 Jul 26 17:12 pilotlog.txt
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas    787795 Jul 26 17:12 log.45743349._036717.job.log.1
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas       357 Jul 26 17:12 output.list
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas       620 Jul 26 17:12 runtime_log
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas   1146880 Jul 26 17:12 result.tar.gz
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas      8745 Jul 26 17:12 runtime_log.err
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas       910 Jul 26 17:12 IQpNDmuurz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoe0KDmYO5vFn.diag
[2025-07-26 17:12:22] -rw-r--r-- 1 boincer umatlas     25476 Jul 26 17:12 stderr.txt
[2025-07-26 17:12:22] HITS file was successfully produced:
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas 206890458 Jul 26 17:11 shared/HITS.pool.root.1
[2025-07-26 17:12:22]  *** Contents of shared directory: ***
[2025-07-26 17:12:22] total 346072
[2025-07-26 17:12:22] -rw-r--r-- 3 boincer umatlas 145772314 Jul 26 12:32 ATLAS.root_0
[2025-07-26 17:12:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 12:32 start_atlas.sh
[2025-07-26 17:12:22] -rw-r--r-- 2 boincer umatlas    542891 Jul 26 12:32 input.tar.gz
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas 206890458 Jul 26 17:11 HITS.pool.root.1
[2025-07-26 17:12:22] -rw------- 1 boincer umatlas   1146880 Jul 26 17:12 result.tar.gz
17:12:23 (5006): run_atlas exited; CPU time 64578.708988
17:12:23 (5006): called boinc_finish(0)

</stderr_txt>
]]>

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