Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
07:13:13 (2903363): wrapper (7.7.26015): starting
07:13:13 (2903363): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 07:13:13] Arguments: --nthreads 12
[2025-07-27 07:13:13] Threads: 12
[2025-07-27 07:13:13] Checking for CVMFS
[2025-07-27 07:13:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 07:13:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 07:13:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 07:13:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 07:13:14] 2.13.1.0 2312760 1738 28020 148811 2 57 3701856 6144001 0 130560 0 1441328 99.992 59512 827 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-27 07:13:14] CVMFS is ok
[2025-07-27 07:13:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 07:13:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-27 07:13:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-27 07:13:14] Further information can be found at the LHC@home message board.
[2025-07-27 07:13:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 07:13:14] Checking for apptainer binary...
[2025-07-27 07:13:14] apptainer is not installed, using version from CVMFS
[2025-07-27 07:13:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 07:13:14] ace
[2025-07-27 07:13:14] apptainer works
[2025-07-27 07:13:14] Set ATHENA_PROC_NUMBER=12
[2025-07-27 07:13:14] Set ATHENA_CORE_NUMBER=12
[2025-07-27 07:13:14] Starting ATLAS job with PandaID=6745099900
[2025-07-27 07:13:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 08:42:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 08:42:20]  protocol_id=None
[2025-07-27 08:42:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 08:42:20]  replicas=None
[2025-07-27 08:42:20]  scope=mc23_13p6TeV
[2025-07-27 08:42:20]  status=None
[2025-07-27 08:42:20]  status_code=0
[2025-07-27 08:42:20]  storage_token=
[2025-07-27 08:42:20]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6745099900/log.45743349._034542.job.log.tgz.1
[2025-07-27 08:42:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/23/log.45743349._034542.job.log.tgz.1
[2025-07-27 08:42:20]  workdir=None
[2025-07-27 08:42:20] ]
[2025-07-27 08:42:20] 2025-07-27 13:41:39,121 | INFO     | transferring file log.45743349._034542.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6745099900/log.45743349._034542.job.log.tgz.1 to /var/lib/boinc
[2025-07-27 08:42:20] 2025-07-27 13:41:39,122 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6745099900/log.45743349._034542.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.457433
[2025-07-27 08:42:20] 2025-07-27 13:41:39,141 | INFO     | adding to output.list: log.45743349._034542.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/23/log.45743349._034542.job.log.tg
[2025-07-27 08:42:20] 2025-07-27 13:41:39,142 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 08:42:20] 2025-07-27 13:41:39,143 | INFO     | summary of transferred files:
[2025-07-27 08:42:20] 2025-07-27 13:41:39,143 | INFO     |  -- lfn=log.45743349._034542.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 08:42:20] 2025-07-27 13:41:39,143 | INFO     | stage-out finished correctly
[2025-07-27 08:42:20] 2025-07-27 13:41:39,494 | WARNING  | process 2913658 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 08:42:20] 2025-07-27 13:41:39,495 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6745099900/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 08:42:20] 2025-07-27 13:41:39,567 | INFO     | number of running child processes to parent process 2913658: 1
[2025-07-27 08:42:20] 2025-07-27 13:41:39,567 | INFO     | maximum number of monitored processes: 6
[2025-07-27 08:42:20] 2025-07-27 13:41:40,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 08:42:20] 2025-07-27 13:41:40,091 | INFO     | job 6745099900 has state=finished
[2025-07-27 08:42:20] 2025-07-27 13:41:40,091 | INFO     | preparing for final server update for job 6745099900 in state='finished'
[2025-07-27 08:42:20] 2025-07-27 13:41:40,093 | INFO     | this job has now completed (state=finished)
[2025-07-27 08:42:20] 2025-07-27 13:41:40,093 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 08:42:20] 2025-07-27 13:41:40,093 | INFO     | log transfer has been attempted: DONE
[2025-07-27 08:42:20] 2025-07-27 13:41:40,093 | INFO     | job 6745099900 has finished - writing final server update
[2025-07-27 08:42:20] 2025-07-27 13:41:40,093 | INFO     | total number of processed events: 400 (read)
[2025-07-27 08:42:20] 2025-07-27 13:41:40,095 | INFO     | executing command: lscpu
[2025-07-27 08:42:20] 2025-07-27 13:41:40,124 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 08:42:20] 2025-07-27 13:41:42,070 | INFO     | monitor loop #395: job 0:6745099900 is in state 'finished'
[2025-07-27 08:42:20] 2025-07-27 13:41:42,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:42:20] 2025-07-27 13:41:44,574 | INFO     | monitor loop #396: job 0:6745099900 is in state 'finished'
[2025-07-27 08:42:20] 2025-07-27 13:41:44,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:42:20] 2025-07-27 13:41:47,077 | INFO     | monitor loop #397: job 0:6745099900 is in state 'finished'
[2025-07-27 08:42:20] 2025-07-27 13:41:47,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:42:20] 2025-07-27 13:41:48,167 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 08:42:20] 2025-07-27 13:41:48,170 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2604.2709375
[2025-07-27 08:42:20] 2025-07-27 13:41:48,173 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6745099900/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 08:42:20] 2025-07-27 13:41:48,173 | INFO     | extracted standard info from prmon json
[2025-07-27 08:42:20] 2025-07-27 13:41:48,173 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 08:42:20] 2025-07-27 13:41:48,173 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 08:42:20] 2025-07-27 13:41:48,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 08:42:20] 2025-07-27 13:41:48,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 08:42:20] 2025-07-27 13:41:48,176 | INFO     | fitting pss+swap vs Time
[2025-07-27 08:42:20] 2025-07-27 13:41:48,177 | INFO     | sum of square deviations: 158737860.0
[2025-07-27 08:42:20] 2025-07-27 13:41:48,177 | INFO     | sum of deviations: -42757980.499999985
[2025-07-27 08:42:20] 2025-07-27 13:41:48,178 | INFO     | mean x: 1753621140.5
[2025-07-27 08:42:20] 2025-07-27 13:41:48,178 | INFO     | mean y: 2703272.4625
[2025-07-27 08:42:20] 2025-07-27 13:41:48,178 | INFO     | -- intersect: 475062535.2740733
[2025-07-27 08:42:20] 2025-07-27 13:41:48,178 | INFO     | intersect: 475062535.2740733
[2025-07-27 08:42:20] 2025-07-27 13:41:48,178 | INFO     | chi2: 0.008779963252627126
[2025-07-27 08:42:20] 2025-07-27 13:41:48,178 | INFO     | -- intersect: 475062535.2740733
[2025-07-27 08:42:20] 2025-07-27 13:41:48,178 | INFO     | current memory leak: -0.27 B/s (using 80 data points, chi2=0.01)
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | could have reported an average CPU frequency of 2473 MHz (6 samples)
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | ..............................
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | . Timing measurements:
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | . get job = 0 s
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | . initial setup = 3 s
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | . payload setup = 5 s
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | . stage-in = 0 s
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | . payload execution = 5271 s
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | . stage-out = 0 s
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | . log creation = 0 s
[2025-07-27 08:42:20] 2025-07-27 13:41:48,179 | INFO     | ..............................
[2025-07-27 08:42:20] 2025-07-27 13:41:48,235 | INFO     | 
[2025-07-27 08:42:20] 2025-07-27 13:41:48,236 | INFO     | job summary report
[2025-07-27 08:42:20] 2025-07-27 13:41:48,236 | INFO     | --------------------------------------------------
[2025-07-27 08:42:20] 2025-07-27 13:41:48,236 | INFO     | PanDA job id: 6745099900
[2025-07-27 08:42:20] 2025-07-27 13:41:48,236 | INFO     | task id: 45743349
[2025-07-27 08:42:20] 2025-07-27 13:41:48,236 | INFO     | errors: (none)
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | pilot state: finished 
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | transexitcode: 0
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | exeerrorcode: 0
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | exeerrordiag: 
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | exitcode: 0
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | exitmsg: OK
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | cpuconsumptiontime: 55980 s
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | nevents: 400
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | neventsw: 0
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | pid: 2913658
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | pgrp: 2913658
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | corecount: 12
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | event service: False
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | sizes: {0: 2397254, 1: 2397453, 4: 2397715, 11: 2397743, 5280: 2424388, 5281: 2424387, 5282: 2433639, 5291: 2433777}
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | --------------------------------------------------
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | 
[2025-07-27 08:42:20] 2025-07-27 13:41:48,237 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-07-27 08:42:20] 2025-07-27 13:41:48,256 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,256 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,256 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 08:42:20] 2025-07-27 13:41:48,258 | INFO     | job 6745099900 has completed (purged errors)
[2025-07-27 08:42:20] 2025-07-27 13:41:48,258 | INFO     | overall cleanup function is called
[2025-07-27 08:42:20] 2025-07-27 13:41:49,266 | INFO     | --- collectZombieJob: --- 10, [2913658]
[2025-07-27 08:42:20] 2025-07-27 13:41:49,266 | INFO     | zombie collector waiting for pid 2913658
[2025-07-27 08:42:20] 2025-07-27 13:41:49,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 08:42:20] 2025-07-27 13:41:49,266 | INFO     | collected zombie processes
[2025-07-27 08:42:20] 2025-07-27 13:41:49,266 | INFO     | will attempt to kill all subprocesses of pid=2913658
[2025-07-27 08:42:20] 2025-07-27 13:41:49,342 | INFO     | process IDs to be killed: [2913658] (in reverse order)
[2025-07-27 08:42:20] 2025-07-27 13:41:49,383 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 08:42:20] 2025-07-27 13:41:49,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 08:42:20] 2025-07-27 13:41:49,386 | INFO     | did not find any defunct processes belonging to 2913658
[2025-07-27 08:42:20] 2025-07-27 13:41:49,389 | INFO     | did not find any defunct processes belonging to 2913658
[2025-07-27 08:42:20] 2025-07-27 13:41:49,389 | INFO     | ready for new job
[2025-07-27 08:42:20] 2025-07-27 13:41:49,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 08:42:20] 2025-07-27 13:41:49,390 | INFO     | ***************************************
[2025-07-27 08:42:20] 2025-07-27 13:41:49,391 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 08:42:20] 2025-07-27 13:41:49,391 | INFO     | ***************************************
[2025-07-27 08:42:20] 2025-07-27 13:41:49,391 | INFO     | 
[2025-07-27 08:42:20] 2025-07-27 13:41:49,391 | INFO     | architecture information:
[2025-07-27 08:42:20] 2025-07-27 13:41:49,392 | INFO     | executing command: cat /etc/os-release
[2025-07-27 08:42:20] 2025-07-27 13:41:49,403 | INFO     | cat /etc/os-release:
[2025-07-27 08:42:20] NAME="CentOS Linux"
[2025-07-27 08:42:20] VERSION="7 (Core)"
[2025-07-27 08:42:20] ID="centos"
[2025-07-27 08:42:20] ID_LIKE="rhel fedora"
[2025-07-27 08:42:20] VERSION_ID="7"
[2025-07-27 08:42:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 08:42:20] ANSI_COLOR="0;31"
[2025-07-27 08:42:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 08:42:20] HOME_URL="https://www.centos.org/"
[2025-07-27 08:42:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 08:42:20] 
[2025-07-27 08:42:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 08:42:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 08:42:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 08:42:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 08:42:20] 
[2025-07-27 08:42:20] 2025-07-27 13:41:49,404 | INFO     | ***************************************
[2025-07-27 08:42:20] 2025-07-27 13:41:49,907 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-07-27 08:42:20] 2025-07-27 13:41:49,924 | INFO     | sufficient remaining disk space (22222471168 B)
[2025-07-27 08:42:20] 2025-07-27 13:41:49,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 08:42:20] 2025-07-27 13:41:49,925 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 08:42:20] 2025-07-27 13:41:49,925 | INFO     | update_server=False
[2025-07-27 08:42:20] 2025-07-27 13:41:49,925 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 08:42:20] 2025-07-27 13:41:49,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 08:42:20] 2025-07-27 13:41:49,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:42:20] 2025-07-27 13:41:49,966 | INFO     | all payload control threads have been joined
[2025-07-27 08:42:20] 2025-07-27 13:41:50,082 | INFO     | all job control threads have been joined
[2025-07-27 08:42:20] 2025-07-27 13:41:50,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:42:20] 2025-07-27 13:41:50,584 | INFO     | aborting loop
[2025-07-27 08:42:20] 2025-07-27 13:41:50,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 08:42:20] 2025-07-27 13:41:50,931 | INFO     | [job] retrieve thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:50,931 | INFO     | [job] queue monitor thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:50,971 | INFO     | [payload] control thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:50,982 | INFO     | all data control threads have been joined
[2025-07-27 08:42:20] 2025-07-27 13:41:51,050 | INFO     | [payload] failed_post thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,088 | INFO     | [job] control thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,347 | INFO     | [data] copytool_in thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,350 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,351 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,589 | INFO     | [job] job monitor thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,914 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,931 | INFO     | [data] copytool_out thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:51,988 | INFO     | [data] control thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:52,150 | INFO     | [payload] validate_post thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:52,188 | INFO     | [job] validate thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:54,607 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 08:42:20] 2025-07-27 13:41:54,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140625658570560)>', '<ExcThread(monitor, started 140625097758464)>']
[2025-07-27 08:42:20] 2025-07-27 13:41:59,858 | INFO     | all workflow threads have been joined
[2025-07-27 08:42:20] 2025-07-27 13:41:59,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 08:42:20] 2025-07-27 13:41:59,861 | INFO     | traces error code: 0
[2025-07-27 08:42:20] 2025-07-27 13:41:59,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 08:42:20] 2025-07-27 13:42:20,412 | INFO     | PID=2907069 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 08:42:20] 2025-07-27 13:42:20,413 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 08:42:20] 2025-07-27 13:42:20,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 08:42:20] 2025-07-27 13:42:20,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 08:42:20] 2025-07-27 13:42:20,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 08:42:20] 2025-07-27 13:42:20,413 | INFO     | [monitor] control thread has ended
[2025-07-27 08:42:20] 2025-07-27 13:42:20,543 [wrapper] ==== pilot stdout END ====
[2025-07-27 08:42:20] 2025-07-27 13:42:20,548 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 08:42:20] 2025-07-27 13:42:20,555 [wrapper] pilotpid: 2907069
[2025-07-27 08:42:20] 2025-07-27 13:42:20,559 [wrapper] Pilot exit status: 0
[2025-07-27 08:42:20] 2025-07-27 13:42:20,573 [wrapper] pandaids: 6745099900
[2025-07-27 08:42:20] 2025-07-27 13:42:20,605 [wrapper] cleanup supervisor_pilot 2929601 2907070
[2025-07-27 08:42:20] 2025-07-27 13:42:20,608 [wrapper] Test setup, not cleaning
[2025-07-27 08:42:20] 2025-07-27 13:42:20,611 [wrapper] apfmon messages muted
[2025-07-27 08:42:20] 2025-07-27 13:42:20,614 [wrapper] ==== wrapper stdout END ====
[2025-07-27 08:42:20] 2025-07-27 13:42:20,616 [wrapper] ==== wrapper stderr END ====
[2025-07-27 08:42:20]  *** Error codes and diagnostics ***
[2025-07-27 08:42:20]     "exeErrorCode": 0,
[2025-07-27 08:42:20]     "exeErrorDiag": "",
[2025-07-27 08:42:20]     "pilotErrorCode": 0,
[2025-07-27 08:42:20]     "pilotErrorDiag": "",
[2025-07-27 08:42:20]  *** Listing of results directory ***
[2025-07-27 08:42:20] total 355824
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc    530466 Jul 26 02:16 pilot3.tar.gz
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc      5112 Jul 26 02:40 queuedata.json
[2025-07-27 08:42:20] -rwx------ 1 boinc boinc     36292 Jul 26 02:41 runpilot2-wrapper.sh
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc       100 Jul 27 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 08:42:20] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 07:13 run_atlas
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc       105 Jul 27 07:13 job.xml
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc      6788 Jul 27 07:13 init_data.xml
[2025-07-27 08:42:20] -rw-r--r-- 2 boinc boinc 148046305 Jul 27 07:13 EVNT.45743347._001957.pool.root.1
[2025-07-27 08:42:20] -rw-r--r-- 2 boinc boinc     15095 Jul 27 07:13 start_atlas.sh
[2025-07-27 08:42:20] drwxrwx--x 2 boinc boinc      4096 Jul 27 07:13 shared
[2025-07-27 08:42:20] -rw-r--r-- 2 boinc boinc    542880 Jul 27 07:13 input.tar.gz
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc         0 Jul 27 07:13 boinc_lockfile
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc      2559 Jul 27 07:13 pandaJob.out
[2025-07-27 08:42:20] -rw------- 1 boinc boinc    980109 Jul 27 07:13 agis_schedconf.cvmfs.json
[2025-07-27 08:42:20] -rw------- 1 boinc boinc   1593052 Jul 27 07:13 agis_ddmendpoints.agis.ALL.json
[2025-07-27 08:42:20] drwx------ 4 boinc boinc      4096 Jul 27 07:13 pilot3
[2025-07-27 08:42:20] -rw------- 1 boinc boinc 210697961 Jul 27 08:40 HITS.45743349._034542.pool.root.1
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc       529 Jul 27 08:41 boinc_task_state.xml
[2025-07-27 08:42:20] -rw------- 1 boinc boinc      1051 Jul 27 08:41 memory_monitor_summary.json
[2025-07-27 08:42:20] -rw------- 1 boinc boinc    362214 Jul 27 08:41 log.45743349._034542.job.log.tgz.1
[2025-07-27 08:42:20] -rw------- 1 boinc boinc        95 Jul 27 08:41 pilot_heartbeat.json
[2025-07-27 08:42:20] -rw------- 1 boinc boinc      7812 Jul 27 08:41 heartbeat.json
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc      8192 Jul 27 08:42 boinc_mmap_file
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc        27 Jul 27 08:42 wrapper_checkpoint.txt
[2025-07-27 08:42:20] -rw------- 1 boinc boinc       747 Jul 27 08:42 pilotlog.txt
[2025-07-27 08:42:20] -rw------- 1 boinc boinc    506338 Jul 27 08:42 log.45743349._034542.job.log.1
[2025-07-27 08:42:20] -rw------- 1 boinc boinc       357 Jul 27 08:42 output.list
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc       620 Jul 27 08:42 runtime_log
[2025-07-27 08:42:20] -rw------- 1 boinc boinc    890880 Jul 27 08:42 result.tar.gz
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc      8697 Jul 27 08:42 runtime_log.err
[2025-07-27 08:42:20] -rw------- 1 boinc boinc       648 Jul 27 08:42 3wlMDmcioz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCZRLDmFRnSrn.diag
[2025-07-27 08:42:20] -rw-r--r-- 1 boinc boinc     22001 Jul 27 08:42 stderr.txt
[2025-07-27 08:42:20] HITS file was successfully produced:
[2025-07-27 08:42:20] -rw------- 1 boinc boinc 210697961 Jul 27 08:40 shared/HITS.pool.root.1
[2025-07-27 08:42:20]  *** Contents of shared directory: ***
[2025-07-27 08:42:20] total 351768
[2025-07-27 08:42:20] -rw-r--r-- 2 boinc boinc 148046305 Jul 27 07:13 ATLAS.root_0
[2025-07-27 08:42:20] -rw-r--r-- 2 boinc boinc     15095 Jul 27 07:13 start_atlas.sh
[2025-07-27 08:42:20] -rw-r--r-- 2 boinc boinc    542880 Jul 27 07:13 input.tar.gz
[2025-07-27 08:42:20] -rw------- 1 boinc boinc 210697961 Jul 27 08:40 HITS.pool.root.1
[2025-07-27 08:42:20] -rw------- 1 boinc boinc    890880 Jul 27 08:42 result.tar.gz
08:42:21 (2903363): run_atlas exited; CPU time 55875.205693
08:42:21 (2903363): called boinc_finish(0)

</stderr_txt>
]]>

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