Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:36:02 (3952119): wrapper (7.7.26015): starting
12:36:02 (3952119): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 12:36:02] Arguments: --nthreads 8
[2025-07-26 12:36:02] Threads: 8
[2025-07-26 12:36:02] Checking for CVMFS
[2025-07-26 12:36:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 12:36:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 12:36:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 12:36:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 12:36:02] 2.13.1.0 4026694 6982 92744 148783 2 188 20965397 40960001 12244 16776704 0 95529572 99.999 255174 59205 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 12:36:02] CVMFS is ok
[2025-07-26 12:36:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 12:36:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 12:36:02] Further information can be found at the LHC@home message board.
[2025-07-26 12:36:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 12:36:02] Checking for apptainer binary...
[2025-07-26 12:36:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 12:36:02] Running /usr/bin/apptainer --version
[2025-07-26 12:36:02] apptainer version 1.4.1-1.el9
[2025-07-26 12:36:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 12:36:02] c-208-38.aglt2.org
[2025-07-26 12:36:02] apptainer works
[2025-07-26 12:36:02] Set ATHENA_PROC_NUMBER=8
[2025-07-26 12:36:02] Set ATHENA_CORE_NUMBER=8
[2025-07-26 12:36:02] Starting ATLAS job with PandaID=6745133797
[2025-07-26 12:36:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:32:31]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:32:31]  mtime=0
[2025-07-26 13:32:31]  protocol_id=None
[2025-07-26 13:32:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 13:32:31]  replicas=None
[2025-07-26 13:32:31]  scope=mc23_13p6TeV
[2025-07-26 13:32:31]  status=None
[2025-07-26 13:32:31]  status_code=0
[2025-07-26 13:32:31]  storage_token=
[2025-07-26 13:32:31]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745133797/log.45743349._036799.job.log.tgz.1
[2025-07-26 13:32:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/78/log.45743349._036799.job.log.tgz.1
[2025-07-26 13:32:31]  workdir=None
[2025-07-26 13:32:31] ]
[2025-07-26 13:32:31] 2025-07-26 17:31:51,473 | INFO     | transferring file log.45743349._036799.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745133797/log.45743349._036799.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 13:32:31] 2025-07-26 17:31:51,473 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745133797/log.45743349._036799.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._036799.job
[2025-07-26 13:32:31] 2025-07-26 17:31:51,490 | INFO     | adding to output.list: log.45743349._036799.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/78/log.45743349._036799.job.log.tg
[2025-07-26 13:32:31] 2025-07-26 17:31:51,491 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 13:32:31] 2025-07-26 17:31:51,491 | INFO     | summary of transferred files:
[2025-07-26 13:32:31] 2025-07-26 17:31:51,491 | INFO     |  -- lfn=log.45743349._036799.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 13:32:31] 2025-07-26 17:31:51,491 | INFO     | stage-out finished correctly
[2025-07-26 13:32:31] 2025-07-26 17:31:52,366 | INFO     | monitor loop #248: job 0:6745133797 is in state 'finished'
[2025-07-26 13:32:31] 2025-07-26 17:31:52,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:32:31] 2025-07-26 17:31:54,869 | INFO     | monitor loop #249: job 0:6745133797 is in state 'finished'
[2025-07-26 13:32:31] 2025-07-26 17:31:54,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:32:31] 2025-07-26 17:31:54,886 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 13:32:31] 2025-07-26 17:31:54,941 | INFO     | job 6745133797 has state=finished
[2025-07-26 13:32:31] 2025-07-26 17:31:54,941 | INFO     | preparing for final server update for job 6745133797 in state='finished'
[2025-07-26 13:32:31] 2025-07-26 17:31:54,941 | INFO     | this job has now completed (state=finished)
[2025-07-26 13:32:31] 2025-07-26 17:31:54,941 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 13:32:31] 2025-07-26 17:31:54,941 | INFO     | log transfer has been attempted: DONE
[2025-07-26 13:32:31] 2025-07-26 17:31:54,942 | INFO     | job 6745133797 has finished - writing final server update
[2025-07-26 13:32:31] 2025-07-26 17:31:54,942 | INFO     | total number of processed events: 400 (read)
[2025-07-26 13:32:31] 2025-07-26 17:31:54,942 | INFO     | executing command: lscpu
[2025-07-26 13:32:31] 2025-07-26 17:31:54,997 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 13:32:31] 2025-07-26 17:31:57,372 | INFO     | monitor loop #250: job 0:6745133797 is in state 'finished'
[2025-07-26 13:32:31] 2025-07-26 17:31:57,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:32:31] 2025-07-26 17:31:58,486 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 13:32:31] 2025-07-26 17:31:58,490 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3748.1726875
[2025-07-26 13:32:31] 2025-07-26 17:31:58,503 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745133797/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:32:31] 2025-07-26 17:31:58,504 | INFO     | extracted standard info from prmon json
[2025-07-26 13:32:31] 2025-07-26 17:31:58,504 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 13:32:31] 2025-07-26 17:31:58,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:32:31] 2025-07-26 17:31:58,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:32:31] 2025-07-26 17:31:58,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:32:31] 2025-07-26 17:31:58,505 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:32:31] 2025-07-26 17:31:58,505 | INFO     | sum of square deviations: 34277852.0
[2025-07-26 13:32:31] 2025-07-26 17:31:58,505 | INFO     | sum of deviations: -259134130.50000006
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | mean x: 1753549533.5
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | mean y: 2536469.6041666665
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | -- intersect: 13259041972.113577
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | intersect: 13259041972.113577
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | chi2: 0.0007043150756590331
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | -- intersect: 13259041972.113577
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | current memory leak: -7.56 B/s (using 48 data points, chi2=0.00)
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | could have reported an average CPU frequency of 3754 MHz (5 samples)
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | ..............................
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | . Timing measurements:
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | . get job = 0 s
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | . initial setup = 2 s
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | . payload setup = 5 s
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | . stage-in = 0 s
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | . payload execution = 3316 s
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | . stage-out = 0 s
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | . log creation = 0 s
[2025-07-26 13:32:31] 2025-07-26 17:31:58,506 | INFO     | ..............................
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | 
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | job summary report
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | --------------------------------------------------
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | PanDA job id: 6745133797
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | task id: 45743349
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | errors: (none)
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | pilot state: finished 
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | transexitcode: 0
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | exeerrorcode: 0
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | exeerrordiag: 
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | exitcode: 0
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | exitmsg: OK
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | cpuconsumptiontime: 24585 s
[2025-07-26 13:32:31] 2025-07-26 17:31:59,056 | INFO     | nevents: 400
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | neventsw: 0
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | pid: 3965230
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | pgrp: 3965230
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | corecount: 8
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | event service: False
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | sizes: {0: 2397248, 1: 2397503, 4: 2397765, 11: 2397793, 3324: 2423346, 3325: 2423345, 3326: 2432527, 3329: 2432583, 3333: 2432809}
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | --------------------------------------------------
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | 
[2025-07-26 13:32:31] 2025-07-26 17:31:59,057 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:32:31] 2025-07-26 17:31:59,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:32:31] 2025-07-26 17:31:59,078 | INFO     | job 6745133797 has completed (purged errors)
[2025-07-26 13:32:31] 2025-07-26 17:31:59,078 | INFO     | overall cleanup function is called
[2025-07-26 13:32:31] 2025-07-26 17:32:00,086 | INFO     | --- collectZombieJob: --- 10, [3965230]
[2025-07-26 13:32:31] 2025-07-26 17:32:00,086 | INFO     | zombie collector waiting for pid 3965230
[2025-07-26 13:32:31] 2025-07-26 17:32:00,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:32:31] 2025-07-26 17:32:00,086 | INFO     | collected zombie processes
[2025-07-26 13:32:31] 2025-07-26 17:32:00,086 | INFO     | will attempt to kill all subprocesses of pid=3965230
[2025-07-26 13:32:31] 2025-07-26 17:32:00,439 | INFO     | process IDs to be killed: [3965230] (in reverse order)
[2025-07-26 13:32:31] 2025-07-26 17:32:00,554 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:32:31] 2025-07-26 17:32:00,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:32:31] 2025-07-26 17:32:00,569 | INFO     | did not find any defunct processes belonging to 3965230
[2025-07-26 13:32:31] 2025-07-26 17:32:00,582 | INFO     | did not find any defunct processes belonging to 3965230
[2025-07-26 13:32:31] 2025-07-26 17:32:00,582 | INFO     | ready for new job
[2025-07-26 13:32:31] 2025-07-26 17:32:00,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:32:31] 2025-07-26 17:32:00,584 | INFO     | ***************************************
[2025-07-26 13:32:31] 2025-07-26 17:32:00,584 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:32:31] 2025-07-26 17:32:00,584 | INFO     | ***************************************
[2025-07-26 13:32:31] 2025-07-26 17:32:00,584 | INFO     | 
[2025-07-26 13:32:31] 2025-07-26 17:32:00,588 | INFO     | architecture information:
[2025-07-26 13:32:31] 2025-07-26 17:32:00,588 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:32:31] 2025-07-26 17:32:00,603 | INFO     | cat /etc/os-release:
[2025-07-26 13:32:31] NAME="CentOS Linux"
[2025-07-26 13:32:31] VERSION="7 (Core)"
[2025-07-26 13:32:31] ID="centos"
[2025-07-26 13:32:31] ID_LIKE="rhel fedora"
[2025-07-26 13:32:31] VERSION_ID="7"
[2025-07-26 13:32:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:32:31] ANSI_COLOR="0;31"
[2025-07-26 13:32:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:32:31] HOME_URL="https://www.centos.org/"
[2025-07-26 13:32:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:32:31] 
[2025-07-26 13:32:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:32:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:32:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:32:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:32:31] 
[2025-07-26 13:32:31] 2025-07-26 17:32:00,604 | INFO     | ***************************************
[2025-07-26 13:32:31] 2025-07-26 17:32:01,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 13:32:31] 2025-07-26 17:32:01,122 | INFO     | sufficient remaining disk space (166829490176 B)
[2025-07-26 13:32:31] 2025-07-26 17:32:01,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:32:31] 2025-07-26 17:32:01,122 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:32:31] 2025-07-26 17:32:01,122 | INFO     | update_server=False
[2025-07-26 13:32:31] 2025-07-26 17:32:01,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:32:31] 2025-07-26 17:32:01,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:32:31] 2025-07-26 17:32:01,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:32:31] 2025-07-26 17:32:01,123 | INFO     | aborting loop
[2025-07-26 13:32:31] 2025-07-26 17:32:01,878 | INFO     | all payload control threads have been joined
[2025-07-26 13:32:31] 2025-07-26 17:32:02,034 | INFO     | all data control threads have been joined
[2025-07-26 13:32:31] 2025-07-26 17:32:02,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:32:31] 2025-07-26 17:32:02,128 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:02,128 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:02,303 | INFO     | all job control threads have been joined
[2025-07-26 13:32:31] 2025-07-26 17:32:02,419 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:02,578 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:02,884 | INFO     | [payload] control thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:02,894 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:03,039 | INFO     | [data] control thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:03,075 | INFO     | [job] validate thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:03,177 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:03,274 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:03,309 | INFO     | [job] control thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:03,358 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:03,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:32:31] 2025-07-26 17:32:04,061 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:04,576 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:05,128 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:12,049 | INFO     | job.realtimelogging is not enabled
[2025-07-26 13:32:31] 2025-07-26 17:32:13,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:32:31] 2025-07-26 17:32:14,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731078027072)>', '<ExcThread(monitor, started 139730452739840)>']
[2025-07-26 13:32:31] 2025-07-26 17:32:19,706 | INFO     | all workflow threads have been joined
[2025-07-26 13:32:31] 2025-07-26 17:32:19,707 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:32:31] 2025-07-26 17:32:19,707 | INFO     | traces error code: 0
[2025-07-26 13:32:31] 2025-07-26 17:32:19,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:32:31] 2025-07-26 17:32:31,046 | INFO     | PID=3958707 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 13:32:31] 2025-07-26 17:32:31,046 | INFO     | .. there are 15 such processes running
[2025-07-26 13:32:31] 2025-07-26 17:32:31,047 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:32:31] 2025-07-26 17:32:31,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:32:31] 2025-07-26 17:32:31,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:32:31] 2025-07-26 17:32:31,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:32:31] 2025-07-26 17:32:31,047 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 13:32:31] 2025-07-26 17:32:31,047 | INFO     | [monitor] control thread has ended
[2025-07-26 13:32:31] 2025-07-26 17:32:31,134 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:32:31] 2025-07-26 17:32:31,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:32:31] 2025-07-26 17:32:31,139 [wrapper] pilotpid: 3958707
[2025-07-26 13:32:31] 2025-07-26 17:32:31,142 [wrapper] Pilot exit status: 0
[2025-07-26 13:32:31] 2025-07-26 17:32:31,149 [wrapper] pandaids: 6745133797
[2025-07-26 13:32:31] 2025-07-26 17:32:31,231 [wrapper] cleanup supervisor_pilot   43684 3958708
[2025-07-26 13:32:31] 2025-07-26 17:32:31,234 [wrapper] Test setup, not cleaning
[2025-07-26 13:32:31] 2025-07-26 17:32:31,237 [wrapper] apfmon messages muted
[2025-07-26 13:32:31] 2025-07-26 17:32:31,239 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:32:31] 2025-07-26 17:32:31,241 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:32:31]  *** Error codes and diagnostics ***
[2025-07-26 13:32:31]     "exeErrorCode": 0,
[2025-07-26 13:32:31]     "exeErrorDiag": "",
[2025-07-26 13:32:31]     "pilotErrorCode": 0,
[2025-07-26 13:32:31]     "pilotErrorDiag": "",
[2025-07-26 13:32:31]  *** Listing of results directory ***
[2025-07-26 13:32:31] total 360360
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 07:03 pilot3.tar.gz
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 07:06 queuedata.json
[2025-07-26 13:32:31] -rwx------. 1 boincer umatlas     36292 Jul 26 07:08 runpilot2-wrapper.sh
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas       100 Jul 26 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:32:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 12:36 run_atlas
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas       105 Jul 26 12:36 job.xml
[2025-07-26 13:32:31] -rw-r--r--. 2 boincer umatlas 147004334 Jul 26 12:36 EVNT.45743347._002100.pool.root.1
[2025-07-26 13:32:31] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:36 start_atlas.sh
[2025-07-26 13:32:31] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 12:36 shared
[2025-07-26 13:32:31] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 12:36 input.tar.gz
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas         0 Jul 26 12:36 boinc_lockfile
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 12:36 pandaJob.out
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas    980117 Jul 26 12:36 agis_schedconf.cvmfs.json
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas   1593052 Jul 26 12:36 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:32:31] drwx------. 4 boincer umatlas      4096 Jul 26 12:36 pilot3
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 13:27 init_data.xml
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas       529 Jul 26 13:31 boinc_task_state.xml
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas 216853414 Jul 26 13:31 HITS.45743349._036799.pool.root.1
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas      1028 Jul 26 13:31 memory_monitor_summary.json
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas    294582 Jul 26 13:31 log.45743349._036799.job.log.tgz.1
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas      7764 Jul 26 13:31 heartbeat.json
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 13:32 boinc_mmap_file
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas        27 Jul 26 13:32 wrapper_checkpoint.txt
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas       893 Jul 26 13:32 pilotlog.txt
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas        95 Jul 26 13:32 pilot_heartbeat.json
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas    344688 Jul 26 13:32 log.45743349._036799.job.log.1
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas       357 Jul 26 13:32 output.list
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas       620 Jul 26 13:32 runtime_log
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas    655360 Jul 26 13:32 result.tar.gz
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 13:32 runtime_log.err
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas       651 Jul 26 13:32 i0RMDmswrz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgvRLDmlMs8Fo.diag
[2025-07-26 13:32:31] -rw-r--r--. 1 boincer umatlas     21712 Jul 26 13:32 stderr.txt
[2025-07-26 13:32:31] HITS file was successfully produced:
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas 216853414 Jul 26 13:31 shared/HITS.pool.root.1
[2025-07-26 13:32:31]  *** Contents of shared directory: ***
[2025-07-26 13:32:31] total 356528
[2025-07-26 13:32:31] -rw-r--r--. 2 boincer umatlas 147004334 Jul 26 12:36 ATLAS.root_0
[2025-07-26 13:32:31] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:36 start_atlas.sh
[2025-07-26 13:32:31] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 12:36 input.tar.gz
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas 216853414 Jul 26 13:31 HITS.pool.root.1
[2025-07-26 13:32:31] -rw-------. 1 boincer umatlas    655360 Jul 26 13:32 result.tar.gz
13:32:32 (3952119): run_atlas exited; CPU time 24669.181391
13:32:32 (3952119): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN