Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:56:12 (1505525): wrapper (7.7.26015): starting
09:56:12 (1505525): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 09:56:12] Arguments: --nthreads 12
[2025-07-26 09:56:12] Threads: 12
[2025-07-26 09:56:12] Checking for CVMFS
[2025-07-26 09:56:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 09:56:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 09:56:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 09:56:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 09:56:15] 2.11.3.0 1989253 42782 163564 148783 1 204 25487650 45568001 17235 130560 0 491195835 99.772 351342714 18359 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 09:56:15] CVMFS is ok
[2025-07-26 09:56:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 09:56:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 09:56:15] Further information can be found at the LHC@home message board.
[2025-07-26 09:56:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 09:56:15] Checking for apptainer binary...
[2025-07-26 09:56:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 09:56:15] Running /usr/bin/apptainer --version
[2025-07-26 09:56:15] apptainer version 1.3.3-1.el9
[2025-07-26 09:56:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 09:56:16] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0169.triumf.lcg
[2025-07-26 09:56:16] apptainer works
[2025-07-26 09:56:16] Set ATHENA_PROC_NUMBER=12
[2025-07-26 09:56:16] Set ATHENA_CORE_NUMBER=12
[2025-07-26 09:56:16] Starting ATLAS job with PandaID=6745228882
[2025-07-26 09:56:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 10:02:21]  *** The last 200 lines of the pilot log: ***
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | wrong length of table data, x=[1753549129.0], y=[1456.0] (must be same and length>=4)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,714 | INFO     | could have reported an average CPU frequency of 2740 MHz (4 samples)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | ..............................
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . Timing measurements:
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . get job = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . initial setup = 3 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . payload setup = 35 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . stage-in = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . payload execution = 69 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . stage-out = 1 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . log creation = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | ..............................
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 10:02:21] 2025-07-26 17:01:44,755 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745228882/pilotlog.txt
[2025-07-26 10:02:21] 2025-07-26 17:01:44,837 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 10:02:21] - Log from pilotlog.txt -
[2025-07-26 10:02:21] 2025-07-26 17:01:44,712 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745228882/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | INFO     | extracted standard info from prmon json
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | wrong length of table data, x=[1753549129.0], y=[1456.0] (must be same and length>=4)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,714 | INFO     | could have reported an average CPU frequency of 2740 MHz (4 samples)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | ..............................
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . Timing measurements:
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . get job = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . initial setup = 3 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . payload setup = 35 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . stage-in = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . payload execution = 69 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . stage-out = 1 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . log creation = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | ..............................
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 10:02:21] 2025-07-26 17:01:44,755 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745228882/pilotlog.txt
[2025-07-26 10:02:21] 2025-07-26 17:01:44,837 | WARNING  | 
[2025-07-26 10:02:21] [begin log extracts]
[2025-07-26 10:02:21] - Log from pilotlog.txt -
[2025-07-26 10:02:21] 2025-07-26 17:01:44,712 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745228882/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | INFO     | extracted standard info from prmon json
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:02:21] 2025-07-26 17:01:44,713 | WARNING  | wrong length of table data, x=[1753549129.0], y=[1456.0] (must be same and length>=4)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,714 | INFO     | could have reported an average CPU frequency of 2740 MHz (4 samples)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | ..............................
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . Timing measurements:
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . get job = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . initial setup = 3 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . payload setup = 35 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . stage-in = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . payload execution = 69 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . stage-out = 1 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | . log creation = 0 s
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | ..............................
[2025-07-26 10:02:21] 2025-07-26 17:01:44,754 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 10:02:21] 2025-07-26 17:01:44,755 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745228882/pilotlog.txt
[2025-07-26 10:02:21] [end log extracts]
[2025-07-26 10:02:21] 2025-07-26 17:01:44,837 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 10:02:21] 2025-07-26 17:01:44,838 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | 
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | job summary report
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | --------------------------------------------------
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | PanDA job id: 6745228882
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | task id: 45743349
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 09:59:15,851 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | pilot state: failed 
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | transexitcode: 65
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | exeerrorcode: 65
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 10:02:21] 2025-07-26 17:01:45,838 | INFO     | exitcode: 65
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | cpuconsumptiontime: 15 s
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | nevents: 0
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | neventsw: 0
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | pid: 1515473
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | pgrp: 1515473
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | corecount: 12
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | event service: False
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | sizes: {0: 2397472, 1: 2397472, 12: 2397500, 19: 2397790, 23: 2397818, 108: 2421080, 109: 2421184, 110: 2425532, 113: 2425560, 245: 2425726}
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | --------------------------------------------------
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | 
[2025-07-26 10:02:21] 2025-07-26 17:01:45,839 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 10:02:21] 2025-07-26 17:01:45,898 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,898 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | job 6745228882 has completed (purged errors)
[2025-07-26 10:02:21] 2025-07-26 17:01:45,899 | INFO     | overall cleanup function is called
[2025-07-26 10:02:21] 2025-07-26 17:01:46,906 | INFO     | --- collectZombieJob: --- 10, [1515473]
[2025-07-26 10:02:21] 2025-07-26 17:01:46,906 | INFO     | zombie collector waiting for pid 1515473
[2025-07-26 10:02:21] 2025-07-26 17:01:46,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 10:02:21] 2025-07-26 17:01:46,906 | INFO     | collected zombie processes
[2025-07-26 10:02:21] 2025-07-26 17:01:46,906 | INFO     | will attempt to kill all subprocesses of pid=1515473
[2025-07-26 10:02:21] 2025-07-26 17:01:47,368 | INFO     | process IDs to be killed: [1515473] (in reverse order)
[2025-07-26 10:02:21] 2025-07-26 17:01:47,422 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 10:02:21] 2025-07-26 17:01:47,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 10:02:21] 2025-07-26 17:01:47,430 | INFO     | did not find any defunct processes belonging to 1515473
[2025-07-26 10:02:21] 2025-07-26 17:01:47,436 | INFO     | did not find any defunct processes belonging to 1515473
[2025-07-26 10:02:21] 2025-07-26 17:01:47,437 | INFO     | ready for new job
[2025-07-26 10:02:21] 2025-07-26 17:01:47,437 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 10:02:21] 2025-07-26 17:01:47,438 | INFO     | ***************************************
[2025-07-26 10:02:21] 2025-07-26 17:01:47,438 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 10:02:21] 2025-07-26 17:01:47,438 | INFO     | ***************************************
[2025-07-26 10:02:21] 2025-07-26 17:01:47,438 | INFO     | 
[2025-07-26 10:02:21] 2025-07-26 17:01:47,452 | INFO     | architecture information:
[2025-07-26 10:02:21] 2025-07-26 17:01:47,453 | INFO     | executing command: cat /etc/os-release
[2025-07-26 10:02:21] 2025-07-26 17:01:47,462 | INFO     | cat /etc/os-release:
[2025-07-26 10:02:21] NAME="CentOS Linux"
[2025-07-26 10:02:21] VERSION="7 (Core)"
[2025-07-26 10:02:21] ID="centos"
[2025-07-26 10:02:21] ID_LIKE="rhel fedora"
[2025-07-26 10:02:21] VERSION_ID="7"
[2025-07-26 10:02:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 10:02:21] ANSI_COLOR="0;31"
[2025-07-26 10:02:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 10:02:21] HOME_URL="https://www.centos.org/"
[2025-07-26 10:02:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 10:02:21] 
[2025-07-26 10:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 10:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 10:02:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 10:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 10:02:21] 
[2025-07-26 10:02:21] 2025-07-26 17:01:47,463 | INFO     | ***************************************
[2025-07-26 10:02:21] 2025-07-26 17:01:47,966 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 10:02:21] 2025-07-26 17:01:48,114 | INFO     | sufficient remaining disk space (2453781086208 B)
[2025-07-26 10:02:21] 2025-07-26 17:01:48,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 10:02:21] 2025-07-26 17:01:48,115 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 10:02:21] 2025-07-26 17:01:48,115 | INFO     | update_server=False
[2025-07-26 10:02:21] 2025-07-26 17:01:48,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 10:02:21] 2025-07-26 17:01:48,199 | INFO     | all data control threads have been joined
[2025-07-26 10:02:21] 2025-07-26 17:01:48,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 10:02:21] 2025-07-26 17:01:48,541 | INFO     | all payload control threads have been joined
[2025-07-26 10:02:21] 2025-07-26 17:01:48,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:02:21] 2025-07-26 17:01:48,970 | INFO     | aborting loop
[2025-07-26 10:02:21] 2025-07-26 17:01:49,121 | INFO     | [job] retrieve thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,124 | INFO     | [payload] validate_post thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,205 | INFO     | [data] control thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,382 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,458 | INFO     | [payload] failed_post thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,547 | INFO     | [payload] control thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,638 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,803 | INFO     | [job] validate thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 10:02:21] 2025-07-26 17:01:49,819 | INFO     | all job control threads have been joined
[2025-07-26 10:02:21] 2025-07-26 17:01:49,923 | INFO     | [data] copytool_in thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:49,976 | INFO     | [job] job monitor thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:50,017 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:50,098 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:50,392 | INFO     | [data] copytool_out thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:50,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:02:21] 2025-07-26 17:01:50,825 | INFO     | [job] control thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:51,414 | INFO     | [job] queue monitor thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:53,823 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 10:02:21] 2025-07-26 17:01:55,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810384852800)>', '<ExcThread(monitor, started 139809691522816)>']
[2025-07-26 10:02:21] 2025-07-26 17:02:00,791 | INFO     | all workflow threads have been joined
[2025-07-26 10:02:21] 2025-07-26 17:02:00,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 10:02:21] 2025-07-26 17:02:00,792 | INFO     | traces error code: 0
[2025-07-26 10:02:21] 2025-07-26 17:02:00,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 10:02:21] 2025-07-26 17:02:19,253 | INFO     | PID=1509133 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 10:02:21] 2025-07-26 17:02:19,253 | INFO     | .. there are 35 such processes running
[2025-07-26 10:02:21] 2025-07-26 17:02:19,254 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 10:02:21] 2025-07-26 17:02:19,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 10:02:21] 2025-07-26 17:02:19,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 10:02:21] 2025-07-26 17:02:19,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 10:02:21] 2025-07-26 17:02:19,254 | INFO     | [monitor] control thread has ended
[2025-07-26 10:02:21] 2025-07-26 17:02:19,582 [wrapper] ==== pilot stdout END ====
[2025-07-26 10:02:21] 2025-07-26 17:02:19,642 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 10:02:21] 2025-07-26 17:02:19,685 [wrapper] pilotpid: 1509133
[2025-07-26 10:02:21] 2025-07-26 17:02:19,728 [wrapper] Pilot exit status: 0
[2025-07-26 10:02:21] 2025-07-26 17:02:19,928 [wrapper] pandaids: 6745228882
[2025-07-26 10:02:21] 2025-07-26 17:02:20,385 [wrapper] cleanup supervisor_pilot 1509139 1509134
[2025-07-26 10:02:21] 2025-07-26 17:02:20,453 [wrapper] Test setup, not cleaning
[2025-07-26 10:02:21] 2025-07-26 17:02:20,492 [wrapper] apfmon messages muted
[2025-07-26 10:02:21] 2025-07-26 17:02:20,533 [wrapper] ==== wrapper stdout END ====
[2025-07-26 10:02:21] 2025-07-26 17:02:20,565 [wrapper] ==== wrapper stderr END ====
[2025-07-26 10:02:21]  *** Error codes and diagnostics ***
[2025-07-26 10:02:21]     "exeErrorCode": 65,
[2025-07-26 10:02:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 10:02:21]     "pilotErrorCode": 1305,
[2025-07-26 10:02:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 10:02:21]  *** Listing of results directory ***
[2025-07-26 10:02:21] total 146588
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc    530466 Jul 26 06:41 pilot3.tar.gz
[2025-07-26 10:02:21] -rwx------. 1 boinc boinc     36292 Jul 26 06:58 runpilot2-wrapper.sh
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc      5112 Jul 26 06:58 queuedata.json
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc       100 Jul 26 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 10:02:21] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 09:56 run_atlas
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc       105 Jul 26 09:56 job.xml
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc      6611 Jul 26 09:56 init_data.xml
[2025-07-26 10:02:21] -rw-r--r--. 2 boinc boinc 146027004 Jul 26 09:56 EVNT.45743347._002223.pool.root.1
[2025-07-26 10:02:21] -rw-r--r--. 2 boinc boinc     15095 Jul 26 09:56 start_atlas.sh
[2025-07-26 10:02:21] drwxrwx--x. 2 boinc boinc      4096 Jul 26 09:56 shared
[2025-07-26 10:02:21] -rw-r--r--. 2 boinc boinc    542894 Jul 26 09:56 input.tar.gz
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc         0 Jul 26 09:56 boinc_lockfile
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc      2563 Jul 26 09:56 pandaJob.out
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc    980117 Jul 26 09:57 agis_schedconf.cvmfs.json
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc   1593052 Jul 26 09:57 agis_ddmendpoints.agis.ALL.json
[2025-07-26 10:02:21] drwx------. 4 boinc boinc      4096 Jul 26 09:57 pilot3
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc       523 Jul 26 09:59 boinc_task_state.xml
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc       968 Jul 26 09:59 memory_monitor_summary.json
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc     21534 Jul 26 09:59 log.45743349._038968.job.log.tgz.1
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc      8397 Jul 26 10:01 heartbeat.json
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc      8192 Jul 26 10:02 boinc_mmap_file
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc        22 Jul 26 10:02 wrapper_checkpoint.txt
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc       823 Jul 26 10:02 pilotlog.txt
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc        95 Jul 26 10:02 pilot_heartbeat.json
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc     80882 Jul 26 10:02 log.45743349._038968.job.log.1
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc       188 Jul 26 10:02 output.list
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc       620 Jul 26 10:02 runtime_log
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc    122880 Jul 26 10:02 result.tar.gz
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc      8650 Jul 26 10:02 runtime_log.err
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc       645 Jul 26 10:02 rfmLDmYbuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqr0KDmkq3G7n.diag
[2025-07-26 10:02:21] -rw-r--r--. 1 boinc boinc     22002 Jul 26 10:02 stderr.txt
[2025-07-26 10:02:21] No HITS result produced
[2025-07-26 10:02:21]  *** Contents of shared directory: ***
[2025-07-26 10:02:21] total 143276
[2025-07-26 10:02:21] -rw-r--r--. 2 boinc boinc 146027004 Jul 26 09:56 ATLAS.root_0
[2025-07-26 10:02:21] -rw-r--r--. 2 boinc boinc     15095 Jul 26 09:56 start_atlas.sh
[2025-07-26 10:02:21] -rw-r--r--. 2 boinc boinc    542894 Jul 26 09:56 input.tar.gz
[2025-07-26 10:02:21] -rw-------. 1 boinc boinc    122880 Jul 26 10:02 result.tar.gz
10:02:23 (1505525): run_atlas exited; CPU time 26.191693
10:02:23 (1505525): called boinc_finish(0)

</stderr_txt>
]]>

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