Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:16:17 (4140008): wrapper (7.7.26015): starting
12:16:17 (4140008): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 12:16:17] Arguments: --nthreads 8
[2025-07-26 12:16:17] Threads: 8
[2025-07-26 12:16:17] Checking for CVMFS
[2025-07-26 12:16:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 12:16:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 12:16:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 12:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 12:16:18] 2.13.1.0 285388 7163 93148 148783 2 61 10938333 40960000 12938 16776704 0 94514046 99.999 291029 29882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 12:16:18] CVMFS is ok
[2025-07-26 12:16:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 12:16:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 12:16:18] Further information can be found at the LHC@home message board.
[2025-07-26 12:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 12:16:18] Checking for apptainer binary...
[2025-07-26 12:16:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 12:16:18] Running /usr/bin/apptainer --version
[2025-07-26 12:16:18] apptainer version 1.4.1-1.el9
[2025-07-26 12:16:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 12:16:18] c-208-36.aglt2.org
[2025-07-26 12:16:18] apptainer works
[2025-07-26 12:16:18] Set ATHENA_PROC_NUMBER=8
[2025-07-26 12:16:18] Set ATHENA_CORE_NUMBER=8
[2025-07-26 12:16:18] Starting ATLAS job with PandaID=6745228831
[2025-07-26 12:16:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:12:55]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:12:55]  replicas=None
[2025-07-26 13:12:55]  scope=mc23_13p6TeV
[2025-07-26 13:12:55]  status=None
[2025-07-26 13:12:55]  status_code=0
[2025-07-26 13:12:55]  storage_token=
[2025-07-26 13:12:55]  surl=/tmp/boinchome/slots/11/PanDA_Pilot-6745228831/log.45743349._038917.job.log.tgz.1
[2025-07-26 13:12:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/35/log.45743349._038917.job.log.tgz.1
[2025-07-26 13:12:55]  workdir=None
[2025-07-26 13:12:55] ]
[2025-07-26 13:12:55] 2025-07-26 17:12:12,798 | INFO     | transferring file log.45743349._038917.job.log.tgz.1 from /tmp/boinchome/slots/11/PanDA_Pilot-6745228831/log.45743349._038917.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 13:12:55] 2025-07-26 17:12:12,799 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/11/PanDA_Pilot-6745228831/log.45743349._038917.job.log.tgz.1 /tmp/boinchome/slots/11/log.45743349._038917.j
[2025-07-26 13:12:55] 2025-07-26 17:12:12,818 | INFO     | adding to output.list: log.45743349._038917.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/35/log.45743349._038917.job.log.tg
[2025-07-26 13:12:55] 2025-07-26 17:12:12,819 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 13:12:55] 2025-07-26 17:12:12,819 | INFO     | summary of transferred files:
[2025-07-26 13:12:55] 2025-07-26 17:12:12,819 | INFO     |  -- lfn=log.45743349._038917.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 13:12:55] 2025-07-26 17:12:12,819 | INFO     | stage-out finished correctly
[2025-07-26 13:12:55] 2025-07-26 17:12:13,953 | INFO     | monitor loop #248: job 0:6745228831 is in state 'finished'
[2025-07-26 13:12:55] 2025-07-26 17:12:13,954 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:12:55] 2025-07-26 17:12:15,625 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 13:12:55] 2025-07-26 17:12:16,457 | INFO     | monitor loop #249: job 0:6745228831 is in state 'finished'
[2025-07-26 13:12:55] 2025-07-26 17:12:16,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:12:55] 2025-07-26 17:12:18,539 | INFO     | job 6745228831 has state=finished
[2025-07-26 13:12:55] 2025-07-26 17:12:18,539 | INFO     | preparing for final server update for job 6745228831 in state='finished'
[2025-07-26 13:12:55] 2025-07-26 17:12:18,540 | INFO     | this job has now completed (state=finished)
[2025-07-26 13:12:55] 2025-07-26 17:12:18,540 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 13:12:55] 2025-07-26 17:12:18,540 | INFO     | log transfer has been attempted: DONE
[2025-07-26 13:12:55] 2025-07-26 17:12:18,540 | INFO     | job 6745228831 has finished - writing final server update
[2025-07-26 13:12:55] 2025-07-26 17:12:18,540 | INFO     | total number of processed events: 400 (read)
[2025-07-26 13:12:55] 2025-07-26 17:12:18,541 | INFO     | executing command: lscpu
[2025-07-26 13:12:55] 2025-07-26 17:12:18,596 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 13:12:55] 2025-07-26 17:12:18,959 | INFO     | monitor loop #250: job 0:6745228831 is in state 'finished'
[2025-07-26 13:12:55] 2025-07-26 17:12:18,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:12:55] 2025-07-26 17:12:20,537 | INFO     | PID=4144694 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 13:12:55] 2025-07-26 17:12:20,537 | INFO     | .. there are 16 such processes running
[2025-07-26 13:12:55] 2025-07-26 17:12:21,464 | INFO     | monitor loop #251: job 0:6745228831 is in state 'finished'
[2025-07-26 13:12:55] 2025-07-26 17:12:21,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:12:55] 2025-07-26 17:12:21,874 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 13:12:55] 2025-07-26 17:12:21,879 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3774.5460937499997
[2025-07-26 13:12:55] 2025-07-26 17:12:21,892 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6745228831/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:12:55] 2025-07-26 17:12:21,892 | INFO     | extracted standard info from prmon json
[2025-07-26 13:12:55] 2025-07-26 17:12:21,893 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 13:12:55] 2025-07-26 17:12:21,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:12:55] 2025-07-26 17:12:21,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:12:55] 2025-07-26 17:12:21,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | sum of square deviations: 34277852.0
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | sum of deviations: -1499598776.5
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | mean x: 1753548350.5
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | mean y: 2586791.1875
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | -- intersect: 76717398470.268
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | intersect: 76717398470.268
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | chi2: 0.008325972872181581
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | -- intersect: 76717398470.268
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | current memory leak: -43.75 B/s (using 48 data points, chi2=0.01)
[2025-07-26 13:12:55] 2025-07-26 17:12:21,894 | INFO     | could have reported an average CPU frequency of 3776 MHz (5 samples)
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | ..............................
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | . Timing measurements:
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | . get job = 0 s
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | . initial setup = 2 s
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | . payload setup = 5 s
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | . stage-in = 0 s
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | . payload execution = 3320 s
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | . stage-out = 0 s
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | . log creation = 0 s
[2025-07-26 13:12:55] 2025-07-26 17:12:21,895 | INFO     | ..............................
[2025-07-26 13:12:55] 2025-07-26 17:12:21,949 | INFO     | 
[2025-07-26 13:12:55] 2025-07-26 17:12:21,949 | INFO     | job summary report
[2025-07-26 13:12:55] 2025-07-26 17:12:21,949 | INFO     | --------------------------------------------------
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | PanDA job id: 6745228831
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | task id: 45743349
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | errors: (none)
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | pilot state: finished 
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | transexitcode: 0
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | exeerrorcode: 0
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | exeerrordiag: 
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | exitcode: 0
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | exitmsg: OK
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | cpuconsumptiontime: 24646 s
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | nevents: 400
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | neventsw: 0
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | pid: 4152333
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | pgrp: 4152333
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | corecount: 8
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | event service: False
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | sizes: {0: 2397473, 4: 2397735, 11: 2397763, 3330: 2423315, 3331: 2432315, 3334: 2432371, 3340: 2432725}
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | --------------------------------------------------
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | 
[2025-07-26 13:12:55] 2025-07-26 17:12:21,950 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-07-26 13:12:55] 2025-07-26 17:12:21,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,966 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,966 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | job 6745228831 has completed (purged errors)
[2025-07-26 13:12:55] 2025-07-26 17:12:21,967 | INFO     | overall cleanup function is called
[2025-07-26 13:12:55] 2025-07-26 17:12:22,976 | INFO     | --- collectZombieJob: --- 10, [4152333]
[2025-07-26 13:12:55] 2025-07-26 17:12:22,976 | INFO     | zombie collector waiting for pid 4152333
[2025-07-26 13:12:55] 2025-07-26 17:12:22,976 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:12:55] 2025-07-26 17:12:22,976 | INFO     | collected zombie processes
[2025-07-26 13:12:55] 2025-07-26 17:12:22,976 | INFO     | will attempt to kill all subprocesses of pid=4152333
[2025-07-26 13:12:55] 2025-07-26 17:12:23,314 | INFO     | process IDs to be killed: [4152333] (in reverse order)
[2025-07-26 13:12:55] 2025-07-26 17:12:23,425 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:12:55] 2025-07-26 17:12:23,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:12:55] 2025-07-26 17:12:23,439 | INFO     | did not find any defunct processes belonging to 4152333
[2025-07-26 13:12:55] 2025-07-26 17:12:23,450 | INFO     | did not find any defunct processes belonging to 4152333
[2025-07-26 13:12:55] 2025-07-26 17:12:23,450 | INFO     | ready for new job
[2025-07-26 13:12:55] 2025-07-26 17:12:23,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:12:55] 2025-07-26 17:12:23,451 | INFO     | ***************************************
[2025-07-26 13:12:55] 2025-07-26 17:12:23,451 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:12:55] 2025-07-26 17:12:23,451 | INFO     | ***************************************
[2025-07-26 13:12:55] 2025-07-26 17:12:23,451 | INFO     | 
[2025-07-26 13:12:55] 2025-07-26 17:12:23,455 | INFO     | architecture information:
[2025-07-26 13:12:55] 2025-07-26 17:12:23,456 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:12:55] 2025-07-26 17:12:23,469 | INFO     | cat /etc/os-release:
[2025-07-26 13:12:55] NAME="CentOS Linux"
[2025-07-26 13:12:55] VERSION="7 (Core)"
[2025-07-26 13:12:55] ID="centos"
[2025-07-26 13:12:55] ID_LIKE="rhel fedora"
[2025-07-26 13:12:55] VERSION_ID="7"
[2025-07-26 13:12:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:12:55] ANSI_COLOR="0;31"
[2025-07-26 13:12:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:12:55] HOME_URL="https://www.centos.org/"
[2025-07-26 13:12:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:12:55] 
[2025-07-26 13:12:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:12:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:12:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:12:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:12:55] 
[2025-07-26 13:12:55] 2025-07-26 17:12:23,470 | INFO     | ***************************************
[2025-07-26 13:12:55] 2025-07-26 17:12:23,971 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-07-26 13:12:55] 2025-07-26 17:12:23,984 | INFO     | sufficient remaining disk space (165993775104 B)
[2025-07-26 13:12:55] 2025-07-26 17:12:23,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:12:55] 2025-07-26 17:12:23,984 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:12:55] 2025-07-26 17:12:23,984 | INFO     | update_server=False
[2025-07-26 13:12:55] 2025-07-26 17:12:23,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:12:55] 2025-07-26 17:12:23,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:12:55] 2025-07-26 17:12:24,013 | INFO     | all data control threads have been joined
[2025-07-26 13:12:55] 2025-07-26 17:12:24,247 | INFO     | all payload control threads have been joined
[2025-07-26 13:12:55] 2025-07-26 17:12:24,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:12:55] 2025-07-26 17:12:24,968 | INFO     | aborting loop
[2025-07-26 13:12:55] 2025-07-26 17:12:24,988 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,018 | INFO     | [data] control thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,040 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,221 | INFO     | all job control threads have been joined
[2025-07-26 13:12:55] 2025-07-26 17:12:25,248 | INFO     | [payload] control thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,384 | INFO     | [job] validate thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,570 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,737 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,850 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,973 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:25,989 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:26,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:12:55] 2025-07-26 17:12:26,226 | INFO     | [job] control thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:26,369 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:26,489 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:26,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:12:55] 2025-07-26 17:12:27,967 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:30,198 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:34,385 | INFO     | job.realtimelogging is not enabled
[2025-07-26 13:12:55] 2025-07-26 17:12:35,391 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:12:55] 2025-07-26 17:12:36,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296908478272)>', '<ExcThread(monitor, started 140296423720704)>']
[2025-07-26 13:12:55] 2025-07-26 17:12:41,063 | INFO     | all workflow threads have been joined
[2025-07-26 13:12:55] 2025-07-26 17:12:41,063 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:12:55] 2025-07-26 17:12:41,063 | INFO     | traces error code: 0
[2025-07-26 13:12:55] 2025-07-26 17:12:41,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:12:55] 2025-07-26 17:12:55,023 | INFO     | PID=4144694 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 13:12:55] 2025-07-26 17:12:55,023 | INFO     | .. there are 16 such processes running
[2025-07-26 13:12:55] 2025-07-26 17:12:55,024 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:12:55] 2025-07-26 17:12:55,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:12:55] 2025-07-26 17:12:55,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:12:55] 2025-07-26 17:12:55,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:12:55] 2025-07-26 17:12:55,024 | INFO     | [monitor] control thread has ended
[2025-07-26 13:12:55] 2025-07-26 17:12:55,103 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:12:55] 2025-07-26 17:12:55,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:12:55] 2025-07-26 17:12:55,108 [wrapper] pilotpid: 4144694
[2025-07-26 13:12:55] 2025-07-26 17:12:55,111 [wrapper] Pilot exit status: 0
[2025-07-26 13:12:55] 2025-07-26 17:12:55,121 [wrapper] pandaids: 6745228831
[2025-07-26 13:12:55] 2025-07-26 17:12:55,203 [wrapper] cleanup supervisor_pilot  215951 4144695
[2025-07-26 13:12:55] 2025-07-26 17:12:55,205 [wrapper] Test setup, not cleaning
[2025-07-26 13:12:55] 2025-07-26 17:12:55,208 [wrapper] apfmon messages muted
[2025-07-26 13:12:55] 2025-07-26 17:12:55,210 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:12:55] 2025-07-26 17:12:55,212 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:12:55]  *** Error codes and diagnostics ***
[2025-07-26 13:12:55]     "exeErrorCode": 0,
[2025-07-26 13:12:55]     "exeErrorDiag": "",
[2025-07-26 13:12:55]     "pilotErrorCode": 0,
[2025-07-26 13:12:55]     "pilotErrorDiag": "",
[2025-07-26 13:12:55]  *** Listing of results directory ***
[2025-07-26 13:12:55] total 351740
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 09:41 pilot3.tar.gz
[2025-07-26 13:12:55] -rwx------. 1 boincer umatlas     36292 Jul 26 09:54 runpilot2-wrapper.sh
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 09:54 queuedata.json
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas       100 Jul 26 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:12:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 12:16 run_atlas
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas       105 Jul 26 12:16 job.xml
[2025-07-26 13:12:55] -rw-r--r--. 2 boincer umatlas 147166923 Jul 26 12:16 EVNT.45743347._002220.pool.root.1
[2025-07-26 13:12:55] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:16 start_atlas.sh
[2025-07-26 13:12:55] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 12:16 shared
[2025-07-26 13:12:55] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 12:16 input.tar.gz
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas         0 Jul 26 12:16 boinc_lockfile
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas      2561 Jul 26 12:16 pandaJob.out
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas    980117 Jul 26 12:16 agis_schedconf.cvmfs.json
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas   1593052 Jul 26 12:16 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:12:55] drwx------. 4 boincer umatlas      4096 Jul 26 12:16 pilot3
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 13:02 init_data.xml
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas       529 Jul 26 13:11 boinc_task_state.xml
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas 207886811 Jul 26 13:11 HITS.45743349._038917.pool.root.1
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas      1030 Jul 26 13:12 memory_monitor_summary.json
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas    281830 Jul 26 13:12 log.45743349._038917.job.log.tgz.1
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas      7768 Jul 26 13:12 heartbeat.json
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 13:12 boinc_mmap_file
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas        27 Jul 26 13:12 wrapper_checkpoint.txt
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas        95 Jul 26 13:12 pilot_heartbeat.json
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas       823 Jul 26 13:12 pilotlog.txt
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas    345916 Jul 26 13:12 log.45743349._038917.job.log.1
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas       357 Jul 26 13:12 output.list
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas       620 Jul 26 13:12 runtime_log
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas    645120 Jul 26 13:12 result.tar.gz
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas       651 Jul 26 13:12 vdDMDmTXuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzq0KDmqjqFan.diag
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas      8674 Jul 26 13:12 runtime_log.err
[2025-07-26 13:12:55] -rw-r--r--. 1 boincer umatlas     21937 Jul 26 13:12 stderr.txt
[2025-07-26 13:12:55] HITS file was successfully produced:
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas 207886811 Jul 26 13:11 shared/HITS.pool.root.1
[2025-07-26 13:12:55]  *** Contents of shared directory: ***
[2025-07-26 13:12:55] total 347920
[2025-07-26 13:12:55] -rw-r--r--. 2 boincer umatlas 147166923 Jul 26 12:16 ATLAS.root_0
[2025-07-26 13:12:55] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:16 start_atlas.sh
[2025-07-26 13:12:55] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 12:16 input.tar.gz
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas 207886811 Jul 26 13:11 HITS.pool.root.1
[2025-07-26 13:12:55] -rw-------. 1 boincer umatlas    645120 Jul 26 13:12 result.tar.gz
13:12:56 (4140008): run_atlas exited; CPU time 24729.124854
13:12:56 (4140008): called boinc_finish(0)

</stderr_txt>
]]>

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