Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:09:49 (4072709): wrapper (7.7.26015): starting
12:09:49 (4072709): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 12:09:49] Arguments: --nthreads 8
[2025-07-26 12:09:49] Threads: 8
[2025-07-26 12:09:49] Checking for CVMFS
[2025-07-26 12:09:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 12:09:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 12:09:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 12:09:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 12:09:49] 2.13.1.0 285388 7156 93400 148782 0 188 10935435 40960000 12852 16776704 0 94325655 99.999 289736 29799 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 12:09:49] CVMFS is ok
[2025-07-26 12:09:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 12:09:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 12:09:49] Further information can be found at the LHC@home message board.
[2025-07-26 12:09:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 12:09:49] Checking for apptainer binary...
[2025-07-26 12:09:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 12:09:49] Running /usr/bin/apptainer --version
[2025-07-26 12:09:49] apptainer version 1.4.1-1.el9
[2025-07-26 12:09:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 12:09:49] c-208-36.aglt2.org
[2025-07-26 12:09:49] apptainer works
[2025-07-26 12:09:49] Set ATHENA_PROC_NUMBER=8
[2025-07-26 12:09:49] Set ATHENA_CORE_NUMBER=8
[2025-07-26 12:09:49] Starting ATLAS job with PandaID=6745228351
[2025-07-26 12:09:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:04:58]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:04:58]  is_tar=False
[2025-07-26 13:04:58]  lfn=log.45743349._038805.job.log.tgz.1
[2025-07-26 13:04:58]  mtime=0
[2025-07-26 13:04:58]  protocol_id=None
[2025-07-26 13:04:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 13:04:58]  replicas=None
[2025-07-26 13:04:58]  scope=mc23_13p6TeV
[2025-07-26 13:04:58]  status=None
[2025-07-26 13:04:58]  status_code=0
[2025-07-26 13:04:58]  storage_token=
[2025-07-26 13:04:58]  surl=/tmp/boinchome/slots/12/PanDA_Pilot-6745228351/log.45743349._038805.job.log.tgz.1
[2025-07-26 13:04:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/94/log.45743349._038805.job.log.tgz.1
[2025-07-26 13:04:58]  workdir=None
[2025-07-26 13:04:58] ]
[2025-07-26 13:04:58] 2025-07-26 17:04:10,886 | INFO     | transferring file log.45743349._038805.job.log.tgz.1 from /tmp/boinchome/slots/12/PanDA_Pilot-6745228351/log.45743349._038805.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 13:04:58] 2025-07-26 17:04:10,886 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/12/PanDA_Pilot-6745228351/log.45743349._038805.job.log.tgz.1 /tmp/boinchome/slots/12/log.45743349._038805.j
[2025-07-26 13:04:58] 2025-07-26 17:04:10,903 | INFO     | adding to output.list: log.45743349._038805.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/94/log.45743349._038805.job.log.tg
[2025-07-26 13:04:58] 2025-07-26 17:04:10,903 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 13:04:58] 2025-07-26 17:04:10,903 | INFO     | summary of transferred files:
[2025-07-26 13:04:58] 2025-07-26 17:04:10,903 | INFO     |  -- lfn=log.45743349._038805.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 13:04:58] 2025-07-26 17:04:10,903 | INFO     | stage-out finished correctly
[2025-07-26 13:04:58] 2025-07-26 17:04:11,753 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 13:04:58] 2025-07-26 17:04:13,070 | INFO     | job 6745228351 has state=finished
[2025-07-26 13:04:58] 2025-07-26 17:04:13,070 | INFO     | preparing for final server update for job 6745228351 in state='finished'
[2025-07-26 13:04:58] 2025-07-26 17:04:13,070 | INFO     | this job has now completed (state=finished)
[2025-07-26 13:04:58] 2025-07-26 17:04:13,070 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 13:04:58] 2025-07-26 17:04:13,070 | INFO     | log transfer has been attempted: DONE
[2025-07-26 13:04:58] 2025-07-26 17:04:13,070 | INFO     | job 6745228351 has finished - writing final server update
[2025-07-26 13:04:58] 2025-07-26 17:04:13,071 | INFO     | total number of processed events: 400 (read)
[2025-07-26 13:04:58] 2025-07-26 17:04:13,071 | INFO     | executing command: lscpu
[2025-07-26 13:04:58] 2025-07-26 17:04:13,127 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 13:04:58] 2025-07-26 17:04:16,240 | WARNING  | process 4083908 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 13:04:58] 2025-07-26 17:04:16,240 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6745228351/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:04:58] 2025-07-26 17:04:16,444 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 13:04:58] 2025-07-26 17:04:16,450 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3748.1306562499985
[2025-07-26 13:04:58] 2025-07-26 17:04:16,464 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6745228351/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:04:58] 2025-07-26 17:04:16,465 | INFO     | extracted standard info from prmon json
[2025-07-26 13:04:58] 2025-07-26 17:04:16,465 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 13:04:58] 2025-07-26 17:04:16,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:04:58] 2025-07-26 17:04:16,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:04:58] 2025-07-26 17:04:16,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:04:58] 2025-07-26 17:04:16,466 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:04:58] 2025-07-26 17:04:16,466 | INFO     | sum of square deviations: 30168007.5
[2025-07-26 13:04:58] 2025-07-26 17:04:16,466 | INFO     | sum of deviations: 390062974.99999994
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | mean x: 1753547898.5
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | mean y: 2514103.347826087
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | -- intersect: -22670316049.386253
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | intersect: -22670316049.386253
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | chi2: 0.0002633868787460901
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | -- intersect: -22670316049.386253
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | current memory leak: 12.93 B/s (using 46 data points, chi2=0.00)
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | could have reported an average CPU frequency of 3730 MHz (5 samples)
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | ..............................
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | . Timing measurements:
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | . get job = 0 s
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | . initial setup = 2 s
[2025-07-26 13:04:58] 2025-07-26 17:04:16,467 | INFO     | . payload setup = 4 s
[2025-07-26 13:04:58] 2025-07-26 17:04:16,468 | INFO     | . stage-in = 0 s
[2025-07-26 13:04:58] 2025-07-26 17:04:16,468 | INFO     | . payload execution = 3228 s
[2025-07-26 13:04:58] 2025-07-26 17:04:16,468 | INFO     | . stage-out = 0 s
[2025-07-26 13:04:58] 2025-07-26 17:04:16,468 | INFO     | . log creation = 0 s
[2025-07-26 13:04:58] 2025-07-26 17:04:16,468 | INFO     | ..............................
[2025-07-26 13:04:58] 2025-07-26 17:04:16,521 | INFO     | 
[2025-07-26 13:04:58] 2025-07-26 17:04:16,521 | INFO     | job summary report
[2025-07-26 13:04:58] 2025-07-26 17:04:16,521 | INFO     | --------------------------------------------------
[2025-07-26 13:04:58] 2025-07-26 17:04:16,521 | INFO     | PanDA job id: 6745228351
[2025-07-26 13:04:58] 2025-07-26 17:04:16,521 | INFO     | task id: 45743349
[2025-07-26 13:04:58] 2025-07-26 17:04:16,521 | INFO     | errors: (none)
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | pilot state: finished 
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | transexitcode: 0
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | exeerrorcode: 0
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | exeerrordiag: 
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | exitcode: 0
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | exitmsg: OK
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | cpuconsumptiontime: 24151 s
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | nevents: 400
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | neventsw: 0
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | pid: 4083908
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | pgrp: 4083908
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | corecount: 8
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | event service: False
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | sizes: {0: 2397419, 3: 2397681, 10: 2397709, 3237: 2423235, 3238: 2432235, 3239: 2432291, 3244: 2432645}
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | --------------------------------------------------
[2025-07-26 13:04:58] 2025-07-26 17:04:16,522 | INFO     | 
[2025-07-26 13:04:58] 2025-07-26 17:04:16,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | job 6745228351 has completed (purged errors)
[2025-07-26 13:04:58] 2025-07-26 17:04:16,539 | INFO     | overall cleanup function is called
[2025-07-26 13:04:58] 2025-07-26 17:04:16,638 | INFO     | number of running child processes to parent process 4083908: 1
[2025-07-26 13:04:58] 2025-07-26 17:04:16,638 | INFO     | maximum number of monitored processes: 6
[2025-07-26 13:04:58] 2025-07-26 17:04:16,638 | INFO     | aborting job monitoring since job object (job id=6745228351) has expired
[2025-07-26 13:04:58] 2025-07-26 17:04:17,546 | INFO     | --- collectZombieJob: --- 10, [4083908]
[2025-07-26 13:04:58] 2025-07-26 17:04:17,546 | INFO     | zombie collector waiting for pid 4083908
[2025-07-26 13:04:58] 2025-07-26 17:04:17,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:04:58] 2025-07-26 17:04:17,546 | INFO     | collected zombie processes
[2025-07-26 13:04:58] 2025-07-26 17:04:17,546 | INFO     | will attempt to kill all subprocesses of pid=4083908
[2025-07-26 13:04:58] 2025-07-26 17:04:17,877 | INFO     | process IDs to be killed: [4083908] (in reverse order)
[2025-07-26 13:04:58] 2025-07-26 17:04:17,985 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:04:58] 2025-07-26 17:04:17,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:04:58] 2025-07-26 17:04:17,999 | INFO     | did not find any defunct processes belonging to 4083908
[2025-07-26 13:04:58] 2025-07-26 17:04:18,011 | INFO     | did not find any defunct processes belonging to 4083908
[2025-07-26 13:04:58] 2025-07-26 17:04:18,011 | INFO     | ready for new job
[2025-07-26 13:04:58] 2025-07-26 17:04:18,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:04:58] 2025-07-26 17:04:18,012 | INFO     | ***************************************
[2025-07-26 13:04:58] 2025-07-26 17:04:18,012 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:04:58] 2025-07-26 17:04:18,012 | INFO     | ***************************************
[2025-07-26 13:04:58] 2025-07-26 17:04:18,012 | INFO     | 
[2025-07-26 13:04:58] 2025-07-26 17:04:18,016 | INFO     | architecture information:
[2025-07-26 13:04:58] 2025-07-26 17:04:18,017 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:04:58] 2025-07-26 17:04:18,028 | INFO     | cat /etc/os-release:
[2025-07-26 13:04:58] NAME="CentOS Linux"
[2025-07-26 13:04:58] VERSION="7 (Core)"
[2025-07-26 13:04:58] ID="centos"
[2025-07-26 13:04:58] ID_LIKE="rhel fedora"
[2025-07-26 13:04:58] VERSION_ID="7"
[2025-07-26 13:04:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:04:58] ANSI_COLOR="0;31"
[2025-07-26 13:04:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:04:58] HOME_URL="https://www.centos.org/"
[2025-07-26 13:04:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:04:58] 
[2025-07-26 13:04:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:04:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:04:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:04:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:04:58] 
[2025-07-26 13:04:58] 2025-07-26 17:04:18,028 | INFO     | ***************************************
[2025-07-26 13:04:58] 2025-07-26 17:04:18,530 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-07-26 13:04:58] 2025-07-26 17:04:18,542 | INFO     | sufficient remaining disk space (166297862144 B)
[2025-07-26 13:04:58] 2025-07-26 17:04:18,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:04:58] 2025-07-26 17:04:18,542 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:04:58] 2025-07-26 17:04:18,542 | INFO     | update_server=False
[2025-07-26 13:04:58] 2025-07-26 17:04:18,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:04:58] 2025-07-26 17:04:18,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:04:58] 2025-07-26 17:04:18,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:04:58] 2025-07-26 17:04:18,543 | INFO     | aborting loop
[2025-07-26 13:04:58] 2025-07-26 17:04:18,767 | INFO     | all job control threads have been joined
[2025-07-26 13:04:58] 2025-07-26 17:04:18,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:04:58] 2025-07-26 17:04:19,547 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:19,548 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:19,579 | INFO     | all data control threads have been joined
[2025-07-26 13:04:58] 2025-07-26 17:04:19,676 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:19,687 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:19,773 | INFO     | [job] control thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:19,839 | INFO     | all payload control threads have been joined
[2025-07-26 13:04:58] 2025-07-26 17:04:19,948 | INFO     | [job] validate thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:20,131 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:20,266 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:20,341 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:20,464 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:20,585 | INFO     | [data] control thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:20,844 | INFO     | [payload] control thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:20,970 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:21,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:04:58] 2025-07-26 17:04:22,535 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:22,548 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:29,575 | INFO     | job.realtimelogging is not enabled
[2025-07-26 13:04:58] 2025-07-26 17:04:30,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:04:58] 2025-07-26 17:04:32,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407396239168)>', '<ExcThread(monitor, started 140406616475392)>']
[2025-07-26 13:04:58] 2025-07-26 17:04:37,306 | INFO     | all workflow threads have been joined
[2025-07-26 13:04:58] 2025-07-26 17:04:37,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:04:58] 2025-07-26 17:04:37,306 | INFO     | traces error code: 0
[2025-07-26 13:04:58] 2025-07-26 17:04:37,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:04:58] 2025-07-26 17:04:49,620 | INFO     | PID=4076309 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 13:04:58] 2025-07-26 17:04:49,621 | INFO     | .. there are 16 such processes running
[2025-07-26 13:04:58] 2025-07-26 17:04:49,621 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:04:58] 2025-07-26 17:04:49,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:04:58] 2025-07-26 17:04:49,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:04:58] 2025-07-26 17:04:49,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:04:58] 2025-07-26 17:04:49,621 | INFO     | [monitor] control thread has ended
[2025-07-26 13:04:58] 2025-07-26 17:04:49,700 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:04:58] 2025-07-26 17:04:49,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:04:58] 2025-07-26 17:04:49,705 [wrapper] pilotpid: 4076309
[2025-07-26 13:04:58] 2025-07-26 17:04:49,708 [wrapper] Pilot exit status: 0
[2025-07-26 13:04:58] 2025-07-26 17:04:49,716 [wrapper] pandaids: 6745228351
[2025-07-26 13:04:58] 2025-07-26 17:04:49,798 [wrapper] cleanup supervisor_pilot  211582 4076310
[2025-07-26 13:04:58] 2025-07-26 17:04:49,801 [wrapper] Test setup, not cleaning
[2025-07-26 13:04:58] 2025-07-26 17:04:49,805 [wrapper] apfmon messages muted
[2025-07-26 13:04:58] 2025-07-26 17:04:49,808 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:04:58] 2025-07-26 17:04:49,811 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:04:58]  *** Error codes and diagnostics ***
[2025-07-26 13:04:58]     "exeErrorCode": 0,
[2025-07-26 13:04:58]     "exeErrorDiag": "",
[2025-07-26 13:04:58]     "pilotErrorCode": 0,
[2025-07-26 13:04:58]     "pilotErrorDiag": "",
[2025-07-26 13:04:58]  *** Listing of results directory ***
[2025-07-26 13:04:58] total 432264
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 09:41 pilot3.tar.gz
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 09:43 queuedata.json
[2025-07-26 13:04:58] -rwx------. 1 boincer umatlas     36292 Jul 26 09:44 runpilot2-wrapper.sh
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas       100 Jul 26 12:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:04:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 12:09 run_atlas
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas       105 Jul 26 12:09 job.xml
[2025-07-26 13:04:58] -rw-r--r--. 2 boincer umatlas 228595953 Jul 26 12:09 EVNT.45743347._002215.pool.root.1
[2025-07-26 13:04:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 12:09 shared
[2025-07-26 13:04:58] -rw-r--r--. 2 boincer umatlas    542887 Jul 26 12:09 input.tar.gz
[2025-07-26 13:04:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:09 start_atlas.sh
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas         0 Jul 26 12:09 boinc_lockfile
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas      2559 Jul 26 12:09 pandaJob.out
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas    980133 Jul 26 12:09 agis_schedconf.cvmfs.json
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas   1593052 Jul 26 12:09 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:04:58] drwx------. 4 boincer umatlas      4096 Jul 26 12:09 pilot3
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 13:02 init_data.xml
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas 208933447 Jul 26 13:03 HITS.45743349._038805.pool.root.1
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas       529 Jul 26 13:03 boinc_task_state.xml
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas      1028 Jul 26 13:04 memory_monitor_summary.json
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas        95 Jul 26 13:04 pilot_heartbeat.json
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas    278076 Jul 26 13:04 log.45743349._038805.job.log.tgz.1
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas      7763 Jul 26 13:04 heartbeat.json
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas       823 Jul 26 13:04 pilotlog.txt
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas    337667 Jul 26 13:04 log.45743349._038805.job.log.1
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas       357 Jul 26 13:04 output.list
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas       620 Jul 26 13:04 runtime_log
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas    634880 Jul 26 13:04 result.tar.gz
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas      8674 Jul 26 13:04 runtime_log.err
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas       651 Jul 26 13:04 7YoKDmmNuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6FSLDmbaLXGo.diag
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas        27 Jul 26 13:04 wrapper_checkpoint.txt
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 13:04 boinc_mmap_file
[2025-07-26 13:04:58] -rw-r--r--. 1 boincer umatlas     21584 Jul 26 13:04 stderr.txt
[2025-07-26 13:04:58] HITS file was successfully produced:
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas 208933447 Jul 26 13:03 shared/HITS.pool.root.1
[2025-07-26 13:04:58]  *** Contents of shared directory: ***
[2025-07-26 13:04:58] total 428456
[2025-07-26 13:04:58] -rw-r--r--. 2 boincer umatlas 228595953 Jul 26 12:09 ATLAS.root_0
[2025-07-26 13:04:58] -rw-r--r--. 2 boincer umatlas    542887 Jul 26 12:09 input.tar.gz
[2025-07-26 13:04:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 12:09 start_atlas.sh
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas 208933447 Jul 26 13:03 HITS.pool.root.1
[2025-07-26 13:04:58] -rw-------. 1 boincer umatlas    634880 Jul 26 13:04 result.tar.gz
13:05:00 (4072709): run_atlas exited; CPU time 24233.060686
13:05:00 (4072709): called boinc_finish(0)

</stderr_txt>
]]>

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