Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:12:02 (2863): wrapper (7.7.26015): starting
09:12:02 (2863): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 09:12:02] Arguments: --nthreads 12
[2025-07-26 09:12:02] Threads: 12
[2025-07-26 09:12:02] Checking for CVMFS
[2025-07-26 09:12:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 09:12:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 09:12:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 09:12:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 09:12:03] 2.11.5.0 39759 35779 160060 148782 2 208 40864845 45568000 8552 130560 0 277242439 99.760 192972991 25416 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 09:12:03] CVMFS is ok
[2025-07-26 09:12:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 09:12:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 09:12:03] Further information can be found at the LHC@home message board.
[2025-07-26 09:12:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 09:12:03] Checking for apptainer binary...
[2025-07-26 09:12:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 09:12:03] Running /usr/bin/apptainer --version
[2025-07-26 09:12:03] apptainer version 1.4.1-1.el9
[2025-07-26 09:12:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 09:12:03] wns0077.triumf.lcg
[2025-07-26 09:12:03] apptainer works
[2025-07-26 09:12:03] Set ATHENA_PROC_NUMBER=12
[2025-07-26 09:12:03] Set ATHENA_CORE_NUMBER=12
[2025-07-26 09:12:03] Starting ATLAS job with PandaID=6745228188
[2025-07-26 09:12:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 09:15:22]  *** The last 200 lines of the pilot log: ***
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | WARNING  | found no stored workdir sizes
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | WARNING  | wrong length of table data, x=[1753546355.0], y=[766.0] (must be same and length>=4)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | ..............................
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . Timing measurements:
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . get job = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . initial setup = 2 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . payload setup = 4 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . stage-in = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . payload execution = 15 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . stage-out = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . log creation = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | ..............................
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745228188/pilotlog.txt
[2025-07-26 09:15:22] 2025-07-26 16:14:50,483 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 09:15:22] - Log from pilotlog.txt -
[2025-07-26 09:15:22] 2025-07-26 16:14:50,471 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 09:15:22] 2025-07-26 16:14:50,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | WARNING  | found no stored workdir sizes
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | WARNING  | wrong length of table data, x=[1753546355.0], y=[766.0] (must be same and length>=4)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | ..............................
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . Timing measurements:
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . get job = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . initial setup = 2 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . payload setup = 4 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . stage-in = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . payload execution = 15 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . stage-out = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . log creation = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | ..............................
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745228188/pilotlog.txt
[2025-07-26 09:15:22] 2025-07-26 16:14:50,483 | WARNING  | 
[2025-07-26 09:15:22] [begin log extracts]
[2025-07-26 09:15:22] - Log from pilotlog.txt -
[2025-07-26 09:15:22] 2025-07-26 16:14:50,471 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 09:15:22] 2025-07-26 16:14:50,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | WARNING  | found no stored workdir sizes
[2025-07-26 09:15:22] 2025-07-26 16:14:50,472 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | WARNING  | wrong length of table data, x=[1753546355.0], y=[766.0] (must be same and length>=4)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | ..............................
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . Timing measurements:
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . get job = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . initial setup = 2 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . payload setup = 4 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . stage-in = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . payload execution = 15 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . stage-out = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | . log creation = 0 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | ..............................
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 09:15:22] 2025-07-26 16:14:50,473 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745228188/pilotlog.txt
[2025-07-26 09:15:22] [end log extracts]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,484 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,484 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | 
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | job summary report
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | --------------------------------------------------
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | PanDA job id: 6745228188
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | task id: 45743349
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 09:12:42,404 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | pilot state: failed 
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | transexitcode: 65
[2025-07-26 09:15:22] 2025-07-26 16:14:50,540 | INFO     | exeerrorcode: 65
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | exitcode: 65
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | cpuconsumptiontime: 16 s
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | nevents: 0
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | neventsw: 0
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | pid: 12754
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | pgrp: 12754
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | corecount: 12
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | event service: False
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | sizes: {0: 2397301, 1: 2397500, 4: 2397762, 11: 2397790, 24: 2420963, 25: 2425411, 144: 2425549}
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | --------------------------------------------------
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | 
[2025-07-26 09:15:22] 2025-07-26 16:14:50,541 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 09:15:22] 2025-07-26 16:14:50,557 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | job 6745228188 has completed (purged errors)
[2025-07-26 09:15:22] 2025-07-26 16:14:50,558 | INFO     | overall cleanup function is called
[2025-07-26 09:15:22] 2025-07-26 16:14:51,564 | INFO     | --- collectZombieJob: --- 10, [12754]
[2025-07-26 09:15:22] 2025-07-26 16:14:51,564 | INFO     | zombie collector waiting for pid 12754
[2025-07-26 09:15:22] 2025-07-26 16:14:51,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 09:15:22] 2025-07-26 16:14:51,564 | INFO     | collected zombie processes
[2025-07-26 09:15:22] 2025-07-26 16:14:51,564 | INFO     | will attempt to kill all subprocesses of pid=12754
[2025-07-26 09:15:22] 2025-07-26 16:14:51,718 | INFO     | process IDs to be killed: [12754] (in reverse order)
[2025-07-26 09:15:22] 2025-07-26 16:14:51,779 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 09:15:22] 2025-07-26 16:14:51,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 09:15:22] 2025-07-26 16:14:51,786 | INFO     | did not find any defunct processes belonging to 12754
[2025-07-26 09:15:22] 2025-07-26 16:14:51,791 | INFO     | did not find any defunct processes belonging to 12754
[2025-07-26 09:15:22] 2025-07-26 16:14:51,791 | INFO     | ready for new job
[2025-07-26 09:15:22] 2025-07-26 16:14:51,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 09:15:22] 2025-07-26 16:14:51,793 | INFO     | ***************************************
[2025-07-26 09:15:22] 2025-07-26 16:14:51,793 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 09:15:22] 2025-07-26 16:14:51,793 | INFO     | ***************************************
[2025-07-26 09:15:22] 2025-07-26 16:14:51,793 | INFO     | 
[2025-07-26 09:15:22] 2025-07-26 16:14:51,795 | INFO     | architecture information:
[2025-07-26 09:15:22] 2025-07-26 16:14:51,795 | INFO     | executing command: cat /etc/os-release
[2025-07-26 09:15:22] 2025-07-26 16:14:51,806 | INFO     | cat /etc/os-release:
[2025-07-26 09:15:22] NAME="CentOS Linux"
[2025-07-26 09:15:22] VERSION="7 (Core)"
[2025-07-26 09:15:22] ID="centos"
[2025-07-26 09:15:22] ID_LIKE="rhel fedora"
[2025-07-26 09:15:22] VERSION_ID="7"
[2025-07-26 09:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 09:15:22] ANSI_COLOR="0;31"
[2025-07-26 09:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 09:15:22] HOME_URL="https://www.centos.org/"
[2025-07-26 09:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 09:15:22] 
[2025-07-26 09:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 09:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 09:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 09:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 09:15:22] 
[2025-07-26 09:15:22] 2025-07-26 16:14:51,807 | INFO     | ***************************************
[2025-07-26 09:15:22] 2025-07-26 16:14:52,309 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 09:15:22] 2025-07-26 16:14:52,321 | INFO     | sufficient remaining disk space (2089846571008 B)
[2025-07-26 09:15:22] 2025-07-26 16:14:52,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 09:15:22] 2025-07-26 16:14:52,322 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 09:15:22] 2025-07-26 16:14:52,322 | INFO     | update_server=False
[2025-07-26 09:15:22] 2025-07-26 16:14:52,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 09:15:22] 2025-07-26 16:14:52,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 09:15:22] 2025-07-26 16:14:52,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 09:15:22] 2025-07-26 16:14:52,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 09:15:22] 2025-07-26 16:14:52,613 | INFO     | aborting loop
[2025-07-26 09:15:22] 2025-07-26 16:14:52,804 | INFO     | all payload control threads have been joined
[2025-07-26 09:15:22] 2025-07-26 16:14:52,927 | INFO     | all data control threads have been joined
[2025-07-26 09:15:22] 2025-07-26 16:14:53,327 | INFO     | [job] queue monitor thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:53,327 | INFO     | [job] retrieve thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:53,618 | INFO     | [job] job monitor thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:53,807 | INFO     | all job control threads have been joined
[2025-07-26 09:15:22] 2025-07-26 16:14:53,809 | INFO     | [payload] control thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:53,932 | INFO     | [data] control thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 09:15:22] 2025-07-26 16:14:54,092 | INFO     | [job] validate thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,093 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,229 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,328 | INFO     | [data] copytool_out thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,344 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,402 | INFO     | [payload] failed_post thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,576 | INFO     | [payload] validate_post thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,803 | INFO     | [data] copytool_in thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:54,812 | INFO     | [job] control thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:58,088 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 09:15:22] 2025-07-26 16:14:58,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123135194944)>', '<ExcThread(monitor, started 140122729195264)>']
[2025-07-26 09:15:22] 2025-07-26 16:15:03,805 | INFO     | all workflow threads have been joined
[2025-07-26 09:15:22] 2025-07-26 16:15:03,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 09:15:22] 2025-07-26 16:15:03,806 | INFO     | traces error code: 0
[2025-07-26 09:15:22] 2025-07-26 16:15:03,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 09:15:22] 2025-07-26 16:15:22,657 | INFO     | PID=6446 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 09:15:22] 2025-07-26 16:15:22,658 | INFO     | .. there are 21 such processes running
[2025-07-26 09:15:22] 2025-07-26 16:15:22,658 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 09:15:22] 2025-07-26 16:15:22,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 09:15:22] 2025-07-26 16:15:22,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 09:15:22] 2025-07-26 16:15:22,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 09:15:22] 2025-07-26 16:15:22,659 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 09:15:22] 2025-07-26 16:15:22,659 | INFO     | [monitor] control thread has ended
[2025-07-26 09:15:22] 2025-07-26 16:15:22,757 [wrapper] ==== pilot stdout END ====
[2025-07-26 09:15:22] 2025-07-26 16:15:22,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 09:15:22] 2025-07-26 16:15:22,761 [wrapper] pilotpid: 6446
[2025-07-26 09:15:22] 2025-07-26 16:15:22,764 [wrapper] Pilot exit status: 0
[2025-07-26 09:15:22] 2025-07-26 16:15:22,772 [wrapper] pandaids: 6745228188
[2025-07-26 09:15:22] 2025-07-26 16:15:22,810 [wrapper] cleanup supervisor_pilot    6452 6447
[2025-07-26 09:15:22] 2025-07-26 16:15:22,813 [wrapper] Test setup, not cleaning
[2025-07-26 09:15:22] 2025-07-26 16:15:22,815 [wrapper] apfmon messages muted
[2025-07-26 09:15:22] 2025-07-26 16:15:22,817 [wrapper] ==== wrapper stdout END ====
[2025-07-26 09:15:22] 2025-07-26 16:15:22,820 [wrapper] ==== wrapper stderr END ====
[2025-07-26 09:15:22]  *** Error codes and diagnostics ***
[2025-07-26 09:15:22]     "exeErrorCode": 65,
[2025-07-26 09:15:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 09:15:22]     "pilotErrorCode": 1305,
[2025-07-26 09:15:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 09:15:22]  *** Listing of results directory ***
[2025-07-26 09:15:22] total 227964
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc    530466 Jul 26 06:41 pilot3.tar.gz
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc      5112 Jul 26 06:43 queuedata.json
[2025-07-26 09:15:22] -rwx------. 1 boinc boinc     36292 Jul 26 06:44 runpilot2-wrapper.sh
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc       100 Jul 26 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 09:15:22] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 09:12 run_atlas
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc       105 Jul 26 09:12 job.xml
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc      6595 Jul 26 09:12 init_data.xml
[2025-07-26 09:15:22] -rw-r--r--. 2 boinc boinc 229374925 Jul 26 09:12 EVNT.45743347._002208.pool.root.1
[2025-07-26 09:15:22] -rw-r--r--. 2 boinc boinc     15095 Jul 26 09:12 start_atlas.sh
[2025-07-26 09:15:22] drwxrwx--x. 2 boinc boinc      4096 Jul 26 09:12 shared
[2025-07-26 09:15:22] -rw-r--r--. 2 boinc boinc    542896 Jul 26 09:12 input.tar.gz
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc         0 Jul 26 09:12 boinc_lockfile
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc      2563 Jul 26 09:12 pandaJob.out
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc    980133 Jul 26 09:12 agis_schedconf.cvmfs.json
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc   1593052 Jul 26 09:12 agis_ddmendpoints.agis.ALL.json
[2025-07-26 09:15:22] drwx------. 4 boinc boinc      4096 Jul 26 09:12 pilot3
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc       522 Jul 26 09:12 boinc_task_state.xml
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc       978 Jul 26 09:12 memory_monitor_summary.json
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc     20447 Jul 26 09:12 log.45743349._038642.job.log.tgz.1
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc      8375 Jul 26 09:14 heartbeat.json
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc      8192 Jul 26 09:15 boinc_mmap_file
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc        22 Jul 26 09:15 wrapper_checkpoint.txt
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc       890 Jul 26 09:15 pilotlog.txt
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc        95 Jul 26 09:15 pilot_heartbeat.json
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc     74166 Jul 26 09:15 log.45743349._038642.job.log.1
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc       188 Jul 26 09:15 output.list
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc       620 Jul 26 09:15 runtime_log
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc    112640 Jul 26 09:15 result.tar.gz
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc      8485 Jul 26 09:15 runtime_log.err
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc       645 Jul 26 09:15 MBJODmlNuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYFSLDmF1AnVo.diag
[2025-07-26 09:15:22] -rw-r--r--. 1 boinc boinc     21600 Jul 26 09:15 stderr.txt
[2025-07-26 09:15:22] No HITS result produced
[2025-07-26 09:15:22]  *** Contents of shared directory: ***
[2025-07-26 09:15:22] total 224660
[2025-07-26 09:15:22] -rw-r--r--. 2 boinc boinc 229374925 Jul 26 09:12 ATLAS.root_0
[2025-07-26 09:15:22] -rw-r--r--. 2 boinc boinc     15095 Jul 26 09:12 start_atlas.sh
[2025-07-26 09:15:22] -rw-r--r--. 2 boinc boinc    542896 Jul 26 09:12 input.tar.gz
[2025-07-26 09:15:22] -rw-------. 1 boinc boinc    112640 Jul 26 09:15 result.tar.gz
09:15:24 (2863): run_atlas exited; CPU time 19.271137
09:15:24 (2863): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN