Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:03:56 (22552): wrapper (7.7.26015): starting
05:03:56 (22552): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 05:03:56] Arguments: --nthreads 8
[2025-07-27 05:03:56] Threads: 8
[2025-07-27 05:03:56] Checking for CVMFS
[2025-07-27 05:03:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:03:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:03:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:03:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:03:58] 2.11.2.0 20077 109130 139356 148797 1 155 12908016 25165824 4031 130560 0 79608429 99.856 47150048 3048 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 05:03:58] CVMFS is ok
[2025-07-27 05:03:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:03:58] Checking for apptainer binary...
[2025-07-27 05:03:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:03:58] Running /usr/bin/apptainer --version
[2025-07-27 05:03:58] apptainer version 1.3.2-1.el7
[2025-07-27 05:03:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:03:59] cg-vwn315.simple-grid.lan
[2025-07-27 05:03:59] apptainer works
[2025-07-27 05:03:59] Set ATHENA_PROC_NUMBER=8
[2025-07-27 05:03:59] Set ATHENA_CORE_NUMBER=8
[2025-07-27 05:03:59] Starting ATLAS job with PandaID=6745133105
[2025-07-27 05:03:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 10:37:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 10:37:39] 2025-07-27 07:38:37,888 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:37:39] 2025-07-27 07:38:37,893 | INFO     | fitting pss+swap vs Time
[2025-07-27 10:37:39] 2025-07-27 07:38:37,894 | INFO     | sum of square deviations: 5968658887.0
[2025-07-27 10:37:39] 2025-07-27 07:38:37,896 | INFO     | sum of deviations: 45342145612.500015
[2025-07-27 10:37:39] 2025-07-27 07:38:37,897 | INFO     | mean x: 1753593658.5
[2025-07-27 10:37:39] 2025-07-27 07:38:37,897 | INFO     | mean y: 2470033.130597015
[2025-07-27 10:37:39] 2025-07-27 07:38:37,897 | INFO     | -- intersect: -13319065091.291338
[2025-07-27 10:37:39] 2025-07-27 07:38:37,897 | INFO     | intersect: -13319065091.291338
[2025-07-27 10:37:39] 2025-07-27 07:38:37,897 | INFO     | chi2: 2.4364501203685407
[2025-07-27 10:37:39] 2025-07-27 07:38:37,898 | INFO     | sum of square deviations: 5640782972.0
[2025-07-27 10:37:39] 2025-07-27 07:38:37,900 | INFO     | sum of deviations: 61878823095.99999
[2025-07-27 10:37:39] 2025-07-27 07:38:37,900 | INFO     | mean x: 1753593506.0
[2025-07-27 10:37:39] 2025-07-27 07:38:37,901 | INFO     | mean y: 2477599.8174904943
[2025-07-27 10:37:39] 2025-07-27 07:38:37,901 | INFO     | -- intersect: -19234267171.023235
[2025-07-27 10:37:39] 2025-07-27 07:38:37,901 | INFO     | intersect: -19234267171.023235
[2025-07-27 10:37:39] 2025-07-27 07:38:37,901 | INFO     | chi2: 1.6652644691716882
[2025-07-27 10:37:39] 2025-07-27 07:38:37,901 | INFO     | current chi2=1.6652644691716882 (change=31.65201884289763 %)
[2025-07-27 10:37:39] 2025-07-27 07:38:37,902 | INFO     | sum of square deviations: 5325139844.5
[2025-07-27 10:37:39] 2025-07-27 07:38:37,904 | INFO     | sum of deviations: 60458118608.5
[2025-07-27 10:37:39] 2025-07-27 07:38:37,904 | INFO     | mean x: 1753593353.5
[2025-07-27 10:37:39] 2025-07-27 07:38:37,904 | INFO     | mean y: 2476913.3449612404
[2025-07-27 10:37:39] 2025-07-27 07:38:37,905 | INFO     | -- intersect: -19906663137.968533
[2025-07-27 10:37:39] 2025-07-27 07:38:37,905 | INFO     | intersect: -19906663137.968533
[2025-07-27 10:37:39] 2025-07-27 07:38:37,905 | INFO     | chi2: 1.6654983814722002
[2025-07-27 10:37:39] 2025-07-27 07:38:37,905 | INFO     | current chi2=1.6654983814722002 (change=-0.01404655565781096 %)
[2025-07-27 10:37:39] 2025-07-27 07:38:37,905 | INFO     | right removable region: 257
[2025-07-27 10:37:39] 2025-07-27 07:38:37,906 | INFO     | sum of square deviations: 5640782972.0
[2025-07-27 10:37:39] 2025-07-27 07:38:37,908 | INFO     | sum of deviations: -2399683879.999998
[2025-07-27 10:37:39] 2025-07-27 07:38:37,908 | INFO     | mean x: 1753593811.0
[2025-07-27 10:37:39] 2025-07-27 07:38:37,909 | INFO     | mean y: 2492085.6844106466
[2025-07-27 10:37:39] 2025-07-27 07:38:37,909 | INFO     | -- intersect: 748500365.2464316
[2025-07-27 10:37:39] 2025-07-27 07:38:37,909 | INFO     | intersect: 748500365.2464316
[2025-07-27 10:37:39] 2025-07-27 07:38:37,909 | INFO     | chi2: 0.802633501190917
[2025-07-27 10:37:39] 2025-07-27 07:38:37,909 | INFO     | current chi2=0.802633501190917 (change=67.05725701170893 %)
[2025-07-27 10:37:39] 2025-07-27 07:38:37,910 | INFO     | sum of square deviations: 5325139844.5
[2025-07-27 10:37:39] 2025-07-27 07:38:37,912 | INFO     | sum of deviations: -3405292700.499998
[2025-07-27 10:37:39] 2025-07-27 07:38:37,912 | INFO     | mean x: 1753593963.5
[2025-07-27 10:37:39] 2025-07-27 07:38:37,912 | INFO     | mean y: 2492565.104651163
[2025-07-27 10:37:39] 2025-07-27 07:38:37,912 | INFO     | -- intersect: 1123871702.1643088
[2025-07-27 10:37:39] 2025-07-27 07:38:37,913 | INFO     | intersect: 1123871702.1643088
[2025-07-27 10:37:39] 2025-07-27 07:38:37,913 | INFO     | chi2: 0.792868689945706
[2025-07-27 10:37:39] 2025-07-27 07:38:37,913 | INFO     | current chi2=0.792868689945706 (change=1.2165965201704572 %)
[2025-07-27 10:37:39] 2025-07-27 07:38:37,913 | INFO     | left removable region: 20
[2025-07-27 10:37:39] 2025-07-27 07:38:37,914 | INFO     | sum of square deviations: 4127772278.0
[2025-07-27 10:37:39] 2025-07-27 07:38:37,915 | INFO     | sum of deviations: 7876230757.0
[2025-07-27 10:37:39] 2025-07-27 07:38:37,916 | INFO     | mean x: 1753593933.0
[2025-07-27 10:37:39] 2025-07-27 07:38:37,916 | INFO     | mean y: 2503353.8438818567
[2025-07-27 10:37:39] 2025-07-27 07:38:37,916 | INFO     | -- intersect: -3343541325.993758
[2025-07-27 10:37:39] 2025-07-27 07:38:37,916 | INFO     | intersect: -3343541325.993758
[2025-07-27 10:37:39] 2025-07-27 07:38:37,916 | INFO     | chi2: 0.0006177521555169224
[2025-07-27 10:37:39] 2025-07-27 07:38:37,917 | INFO     | -- intersect: -3343541325.993758
[2025-07-27 10:37:39] 2025-07-27 07:38:37,917 | INFO     | current memory leak: 1.91 B/s (using 237 data points, chi2=0.00)
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | ..............................
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | . Timing measurements:
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | . get job = 0 s
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | . initial setup = 2 s
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | . payload setup = 12 s
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | . stage-in = 0 s
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | . payload execution = 16322 s
[2025-07-27 10:37:39] 2025-07-27 07:38:37,918 | INFO     | . stage-out = 3 s
[2025-07-27 10:37:39] 2025-07-27 07:38:37,919 | INFO     | . log creation = 1 s
[2025-07-27 10:37:39] 2025-07-27 07:38:37,919 | INFO     | ..............................
[2025-07-27 10:37:39] 2025-07-27 07:38:38,071 | INFO     | 
[2025-07-27 10:37:39] 2025-07-27 07:38:38,071 | INFO     | job summary report
[2025-07-27 10:37:39] 2025-07-27 07:38:38,071 | INFO     | --------------------------------------------------
[2025-07-27 10:37:39] 2025-07-27 07:38:38,071 | INFO     | PanDA job id: 6745133105
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | task id: 45743349
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | errors: (none)
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | pilot state: finished 
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | transexitcode: 0
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | exeerrorcode: 0
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | exeerrordiag: 
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | exitcode: 0
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | exitmsg: OK
[2025-07-27 10:37:39] 2025-07-27 07:38:38,072 | INFO     | cpuconsumptiontime: 62810 s
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | nevents: 400
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | neventsw: 0
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | pid: 666
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | pgrp: 666
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | corecount: 8
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | event service: False
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | sizes: {0: 2397303, 1: 2397502, 7: 2397764, 12: 2397792, 16339: 2428827, 16343: 2437827, 16345: 2438039, 16439: 2438233}
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | --------------------------------------------------
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | 
[2025-07-27 10:37:39] 2025-07-27 07:38:38,073 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-07-27 10:37:39] 2025-07-27 07:38:38,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | job 6745133105 has completed (purged errors)
[2025-07-27 10:37:39] 2025-07-27 07:38:38,338 | INFO     | overall cleanup function is called
[2025-07-27 10:37:39] 2025-07-27 07:38:39,347 | INFO     | --- collectZombieJob: --- 10, [666]
[2025-07-27 10:37:39] 2025-07-27 07:38:39,347 | INFO     | zombie collector waiting for pid 666
[2025-07-27 10:37:39] 2025-07-27 07:38:39,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 10:37:39] 2025-07-27 07:38:39,348 | INFO     | collected zombie processes
[2025-07-27 10:37:39] 2025-07-27 07:38:39,348 | INFO     | will attempt to kill all subprocesses of pid=666
[2025-07-27 10:37:39] 2025-07-27 07:38:39,457 | INFO     | process IDs to be killed: [666] (in reverse order)
[2025-07-27 10:37:39] 2025-07-27 07:38:40,193 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 10:37:39] 2025-07-27 07:38:40,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 10:37:39] 2025-07-27 07:38:40,196 | INFO     | did not find any defunct processes belonging to 666
[2025-07-27 10:37:39] 2025-07-27 07:38:40,199 | INFO     | did not find any defunct processes belonging to 666
[2025-07-27 10:37:39] 2025-07-27 07:38:40,200 | INFO     | ready for new job
[2025-07-27 10:37:39] 2025-07-27 07:38:40,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 10:37:39] 2025-07-27 07:38:40,208 | INFO     | ***************************************
[2025-07-27 10:37:39] 2025-07-27 07:38:40,208 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 10:37:39] 2025-07-27 07:38:40,209 | INFO     | ***************************************
[2025-07-27 10:37:39] 2025-07-27 07:38:40,209 | INFO     | 
[2025-07-27 10:37:39] 2025-07-27 07:38:40,211 | INFO     | pilot is running in a VM
[2025-07-27 10:37:39] 2025-07-27 07:38:40,212 | INFO     | architecture information:
[2025-07-27 10:37:39] 2025-07-27 07:38:40,222 | INFO     | executing command: cat /etc/os-release
[2025-07-27 10:37:39] 2025-07-27 07:38:40,431 | INFO     | cat /etc/os-release:
[2025-07-27 10:37:39] NAME="CentOS Linux"
[2025-07-27 10:37:39] VERSION="7 (Core)"
[2025-07-27 10:37:39] ID="centos"
[2025-07-27 10:37:39] ID_LIKE="rhel fedora"
[2025-07-27 10:37:39] VERSION_ID="7"
[2025-07-27 10:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 10:37:39] ANSI_COLOR="0;31"
[2025-07-27 10:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 10:37:39] HOME_URL="https://www.centos.org/"
[2025-07-27 10:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 10:37:39] 
[2025-07-27 10:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 10:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 10:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 10:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 10:37:39] 
[2025-07-27 10:37:39] 2025-07-27 07:38:40,431 | INFO     | ***************************************
[2025-07-27 10:37:39] 2025-07-27 07:38:40,935 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-07-27 10:37:39] 2025-07-27 07:38:41,078 | INFO     | sufficient remaining disk space (496171483136 B)
[2025-07-27 10:37:39] 2025-07-27 07:38:41,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 10:37:39] 2025-07-27 07:38:41,078 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 10:37:39] 2025-07-27 07:38:41,079 | INFO     | update_server=False
[2025-07-27 10:37:39] 2025-07-27 07:38:41,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 10:37:39] 2025-07-27 07:38:41,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 10:37:39] 2025-07-27 07:38:41,578 | INFO     | all job control threads have been joined
[2025-07-27 10:37:39] 2025-07-27 07:38:41,791 | INFO     | all data control threads have been joined
[2025-07-27 10:37:39] 2025-07-27 07:38:41,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:37:39] 2025-07-27 07:38:41,878 | INFO     | aborting loop
[2025-07-27 10:37:39] 2025-07-27 07:38:42,085 | INFO     | [job] retrieve thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:42,094 | INFO     | all payload control threads have been joined
[2025-07-27 10:37:39] 2025-07-27 07:38:42,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 10:37:39] 2025-07-27 07:38:42,578 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:42,584 | INFO     | [job] control thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:42,687 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:42,796 | INFO     | [data] control thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:42,884 | INFO     | [job] job monitor thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:42,960 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:42,971 | INFO     | [job] validate thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:43,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:37:39] 2025-07-27 07:38:43,100 | INFO     | [payload] control thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:43,431 | INFO     | [payload] validate_post thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:43,487 | INFO     | [payload] failed_post thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:43,500 | INFO     | [data] copytool_in thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:44,069 | INFO     | [job] queue monitor thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:44,487 | INFO     | [data] copytool_out thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:45,091 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:51,673 | INFO     | job.realtimelogging is not enabled
[2025-07-27 10:37:39] 2025-07-27 07:38:52,679 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 10:37:39] 2025-07-27 07:38:54,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394894550848)>', '<ExcThread(monitor, started 140394159404800)>']
[2025-07-27 10:37:39] 2025-07-27 07:38:59,486 | INFO     | all workflow threads have been joined
[2025-07-27 10:37:39] 2025-07-27 07:38:59,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 10:37:39] 2025-07-27 07:38:59,487 | INFO     | traces error code: 0
[2025-07-27 10:37:39] 2025-07-27 07:38:59,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 10:37:39] 2025-07-27 07:39:10,811 | INFO     | PID=26546 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 10:37:39] 2025-07-27 07:39:10,812 | INFO     | .. there are 9 such processes running
[2025-07-27 10:37:39] 2025-07-27 07:39:10,813 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 10:37:39] 2025-07-27 07:39:10,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 10:37:39] 2025-07-27 07:39:10,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 10:37:39] 2025-07-27 07:39:10,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 10:37:39] 2025-07-27 07:39:10,813 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 10:37:39] 2025-07-27 07:39:10,813 | INFO     | [monitor] control thread has ended
[2025-07-27 10:37:39] 2025-07-27 07:39:11,249 [wrapper] ==== pilot stdout END ====
[2025-07-27 10:37:39] 2025-07-27 07:39:11,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 10:37:39] 2025-07-27 07:39:11,389 [wrapper] pilotpid: 26546
[2025-07-27 10:37:39] 2025-07-27 07:39:11,446 [wrapper] Pilot exit status: 0
[2025-07-27 10:37:39] 2025-07-27 07:39:11,914 [wrapper] pandaids: 6745133105
[2025-07-27 10:37:39] 2025-07-27 07:39:12,399 [wrapper] cleanup supervisor_pilot 28298 26547
[2025-07-27 10:37:39] 2025-07-27 07:39:12,434 [wrapper] Test setup, not cleaning
[2025-07-27 10:37:39] 2025-07-27 07:39:12,445 [wrapper] apfmon messages muted
[2025-07-27 10:37:39] 2025-07-27 07:39:12,453 [wrapper] ==== wrapper stdout END ====
[2025-07-27 10:37:39] 2025-07-27 07:39:12,464 [wrapper] ==== wrapper stderr END ====
[2025-07-27 10:37:39]  *** Error codes and diagnostics ***
[2025-07-27 10:37:39]     "exeErrorCode": 0,
[2025-07-27 10:37:39]     "exeErrorDiag": "",
[2025-07-27 10:37:39]     "pilotErrorCode": 0,
[2025-07-27 10:37:39]     "pilotErrorDiag": "",
[2025-07-27 10:37:39]  *** Listing of results directory ***
[2025-07-27 10:37:39] total 398816
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc    530466 Jul 26 12:25 pilot3.tar.gz
[2025-07-27 10:37:39] -rwx------. 1 boinc boinc     36292 Jul 26 12:28 runpilot2-wrapper.sh
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc      5112 Jul 26 12:28 queuedata.json
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc       100 Jul 27 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 10:37:39] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 05:03 run_atlas
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc       105 Jul 27 05:03 job.xml
[2025-07-27 10:37:39] -rw-r--r--. 2 boinc boinc 188248064 Jul 27 05:03 EVNT.45743347._002075.pool.root.1
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc      6391 Jul 27 05:03 init_data.xml
[2025-07-27 10:37:39] -rw-r--r--. 2 boinc boinc     15095 Jul 27 05:03 start_atlas.sh
[2025-07-27 10:37:39] drwxrwx--x. 2 boinc boinc        68 Jul 27 05:03 shared
[2025-07-27 10:37:39] -rw-r--r--. 2 boinc boinc    542884 Jul 27 05:03 input.tar.gz
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc         0 Jul 27 05:03 boinc_lockfile
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc      2562 Jul 27 05:03 pandaJob.out
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc    980117 Jul 27 05:04 agis_schedconf.cvmfs.json
[2025-07-27 10:37:39] drwx------. 4 boinc boinc      4096 Jul 27 05:04 pilot3
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc 212651451 Jul 27 09:35 HITS.45743349._036401.pool.root.1
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc       531 Jul 27 09:35 boinc_task_state.xml
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc      1018 Jul 27 09:36 memory_monitor_summary.json
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc   1593052 Jul 27 09:36 agis_ddmendpoints.agis.ALL.json
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc    394662 Jul 27 09:37 log.45743349._036401.job.log.tgz.1
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc      7774 Jul 27 09:38 heartbeat.json
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc        95 Jul 27 09:39 pilot_heartbeat.json
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc       890 Jul 27 09:39 pilotlog.txt
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc   1420449 Jul 27 09:39 log.45743349._036401.job.log.1
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc       357 Jul 27 09:39 output.list
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc       620 Jul 27 09:39 runtime_log
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc   1832960 Jul 27 09:39 result.tar.gz
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc       657 Jul 27 09:39 V2WLDmzJrz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxqRLDmEveHyn.diag
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc      8674 Jul 27 09:39 runtime_log.err
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc      8192 Jul 27 10:37 boinc_mmap_file
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc        28 Jul 27 10:37 wrapper_checkpoint.txt
[2025-07-27 10:37:39] -rw-r--r--. 1 boinc boinc     20553 Jul 27 10:37 stderr.txt
[2025-07-27 10:37:39] HITS file was successfully produced:
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc 212651451 Jul 27 09:35 shared/HITS.pool.root.1
[2025-07-27 10:37:39]  *** Contents of shared directory: ***
[2025-07-27 10:37:39] total 393844
[2025-07-27 10:37:39] -rw-r--r--. 2 boinc boinc 188248064 Jul 27 05:03 ATLAS.root_0
[2025-07-27 10:37:39] -rw-r--r--. 2 boinc boinc     15095 Jul 27 05:03 start_atlas.sh
[2025-07-27 10:37:39] -rw-r--r--. 2 boinc boinc    542884 Jul 27 05:03 input.tar.gz
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc 212651451 Jul 27 09:35 HITS.pool.root.1
[2025-07-27 10:37:39] -rw-------. 1 boinc boinc   1832960 Jul 27 09:39 result.tar.gz
10:37:41 (22552): run_atlas exited; CPU time 63012.602067
10:37:41 (22552): called boinc_finish(0)

</stderr_txt>
]]>

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