Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:53:48 (4000827): wrapper (7.7.26015): starting
11:53:48 (4000827): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 11:53:48] Arguments: --nthreads 8
[2025-07-26 11:53:48] Threads: 8
[2025-07-26 11:53:48] Checking for CVMFS
[2025-07-26 11:53:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:53:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:53:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:53:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:53:48] 2.13.1.0 285388 7140 92728 148782 0 188 10935284 40960000 12923 16776704 0 94145194 99.999 289733 29804 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 11:53:48] CVMFS is ok
[2025-07-26 11:53:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:53:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:53:48] Further information can be found at the LHC@home message board.
[2025-07-26 11:53:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:53:48] Checking for apptainer binary...
[2025-07-26 11:53:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:53:48] Running /usr/bin/apptainer --version
[2025-07-26 11:53:48] apptainer version 1.4.1-1.el9
[2025-07-26 11:53:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:53:48] c-208-36.aglt2.org
[2025-07-26 11:53:48] apptainer works
[2025-07-26 11:53:48] Set ATHENA_PROC_NUMBER=8
[2025-07-26 11:53:48] Set ATHENA_CORE_NUMBER=8
[2025-07-26 11:53:48] Starting ATLAS job with PandaID=6745132988
[2025-07-26 11:53:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:49:45]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:49:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 12:49:45]  replicas=None
[2025-07-26 12:49:45]  scope=mc23_13p6TeV
[2025-07-26 12:49:45]  status=None
[2025-07-26 12:49:45]  status_code=0
[2025-07-26 12:49:45]  storage_token=
[2025-07-26 12:49:45]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6745132988/log.45743349._036284.job.log.tgz.1
[2025-07-26 12:49:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/41/log.45743349._036284.job.log.tgz.1
[2025-07-26 12:49:45]  workdir=None
[2025-07-26 12:49:45] ]
[2025-07-26 12:49:45] 2025-07-26 16:49:05,775 | INFO     | transferring file log.45743349._036284.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6745132988/log.45743349._036284.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 12:49:45] 2025-07-26 16:49:05,776 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6745132988/log.45743349._036284.job.log.tgz.1 /tmp/boinchome/slots/7/log.45743349._036284.job
[2025-07-26 12:49:45] 2025-07-26 16:49:05,792 | INFO     | adding to output.list: log.45743349._036284.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/41/log.45743349._036284.job.log.tg
[2025-07-26 12:49:45] 2025-07-26 16:49:05,793 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:49:45] 2025-07-26 16:49:05,793 | INFO     | summary of transferred files:
[2025-07-26 12:49:45] 2025-07-26 16:49:05,793 | INFO     |  -- lfn=log.45743349._036284.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:49:45] 2025-07-26 16:49:05,793 | INFO     | stage-out finished correctly
[2025-07-26 12:49:45] 2025-07-26 16:49:05,855 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:49:45] 2025-07-26 16:49:06,576 | INFO     | PID=4004561 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 12:49:45] 2025-07-26 16:49:06,576 | INFO     | .. there are 16 such processes running
[2025-07-26 12:49:45] 2025-07-26 16:49:06,735 | INFO     | monitor loop #246: job 0:6745132988 is in state 'finished'
[2025-07-26 12:49:45] 2025-07-26 16:49:06,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:49:45] 2025-07-26 16:49:08,881 | INFO     | job 6745132988 has state=finished
[2025-07-26 12:49:45] 2025-07-26 16:49:08,881 | INFO     | preparing for final server update for job 6745132988 in state='finished'
[2025-07-26 12:49:45] 2025-07-26 16:49:08,882 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:49:45] 2025-07-26 16:49:08,882 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:49:45] 2025-07-26 16:49:08,882 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:49:45] 2025-07-26 16:49:08,882 | INFO     | job 6745132988 has finished - writing final server update
[2025-07-26 12:49:45] 2025-07-26 16:49:08,882 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:49:45] 2025-07-26 16:49:08,883 | INFO     | executing command: lscpu
[2025-07-26 12:49:45] 2025-07-26 16:49:08,939 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:49:45] 2025-07-26 16:49:09,238 | INFO     | monitor loop #247: job 0:6745132988 is in state 'finished'
[2025-07-26 12:49:45] 2025-07-26 16:49:09,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:49:45] 2025-07-26 16:49:11,741 | INFO     | monitor loop #248: job 0:6745132988 is in state 'finished'
[2025-07-26 12:49:45] 2025-07-26 16:49:11,741 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:49:45] 2025-07-26 16:49:12,215 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 12:49:45] 2025-07-26 16:49:12,222 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.121624999999
[2025-07-26 12:49:45] 2025-07-26 16:49:12,235 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6745132988/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:49:45] 2025-07-26 16:49:12,236 | INFO     | extracted standard info from prmon json
[2025-07-26 12:49:45] 2025-07-26 16:49:12,237 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:49:45] 2025-07-26 16:49:12,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:49:45] 2025-07-26 16:49:12,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:49:45] 2025-07-26 16:49:12,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:49:45] 2025-07-26 16:49:12,238 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:49:45] 2025-07-26 16:49:12,238 | INFO     | sum of square deviations: 32179208.0
[2025-07-26 12:49:45] 2025-07-26 16:49:12,238 | INFO     | sum of deviations: -67542188.99999997
[2025-07-26 12:49:45] 2025-07-26 16:49:12,238 | INFO     | mean x: 1753546970.0
[2025-07-26 12:49:45] 2025-07-26 16:49:12,238 | INFO     | mean y: 2516549.489361702
[2025-07-26 12:49:45] 2025-07-26 16:49:12,238 | INFO     | -- intersect: 3683104364.70586
[2025-07-26 12:49:45] 2025-07-26 16:49:12,238 | INFO     | intersect: 3683104364.70586
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | chi2: 0.0005321291754750805
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | -- intersect: 3683104364.70586
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | current memory leak: -2.10 B/s (using 47 data points, chi2=0.00)
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | could have reported an average CPU frequency of 3776 MHz (5 samples)
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | ..............................
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | . Timing measurements:
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | . get job = 0 s
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | . initial setup = 2 s
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | . payload setup = 5 s
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | . stage-in = 0 s
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | . payload execution = 3283 s
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | . stage-out = 0 s
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | . log creation = 0 s
[2025-07-26 12:49:45] 2025-07-26 16:49:12,239 | INFO     | ..............................
[2025-07-26 12:49:45] 2025-07-26 16:49:12,669 | INFO     | 
[2025-07-26 12:49:45] 2025-07-26 16:49:12,669 | INFO     | job summary report
[2025-07-26 12:49:45] 2025-07-26 16:49:12,669 | INFO     | --------------------------------------------------
[2025-07-26 12:49:45] 2025-07-26 16:49:12,669 | INFO     | PanDA job id: 6745132988
[2025-07-26 12:49:45] 2025-07-26 16:49:12,669 | INFO     | task id: 45743349
[2025-07-26 12:49:45] 2025-07-26 16:49:12,669 | INFO     | errors: (none)
[2025-07-26 12:49:45] 2025-07-26 16:49:12,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:49:45] 2025-07-26 16:49:12,669 | INFO     | pilot state: finished 
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | transexitcode: 0
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | exeerrorcode: 0
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | exeerrordiag: 
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | exitcode: 0
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | exitmsg: OK
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | cpuconsumptiontime: 24733 s
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | nevents: 400
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | neventsw: 0
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | pid: 4011026
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | pgrp: 4011026
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | corecount: 8
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | event service: False
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | sizes: {0: 2397475, 1: 2397475, 5: 2397765, 11: 2397821, 3292: 2423401, 3293: 2432583, 3299: 2432753}
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | --------------------------------------------------
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | 
[2025-07-26 12:49:45] 2025-07-26 16:49:12,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-07-26 12:49:45] 2025-07-26 16:49:12,687 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | job 6745132988 has completed (purged errors)
[2025-07-26 12:49:45] 2025-07-26 16:49:12,689 | INFO     | overall cleanup function is called
[2025-07-26 12:49:45] 2025-07-26 16:49:13,692 | INFO     | --- collectZombieJob: --- 10, [4011026]
[2025-07-26 12:49:45] 2025-07-26 16:49:13,692 | INFO     | zombie collector waiting for pid 4011026
[2025-07-26 12:49:45] 2025-07-26 16:49:13,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:49:45] 2025-07-26 16:49:13,692 | INFO     | collected zombie processes
[2025-07-26 12:49:45] 2025-07-26 16:49:13,692 | INFO     | will attempt to kill all subprocesses of pid=4011026
[2025-07-26 12:49:45] 2025-07-26 16:49:14,026 | INFO     | process IDs to be killed: [4011026] (in reverse order)
[2025-07-26 12:49:45] 2025-07-26 16:49:14,138 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:49:45] 2025-07-26 16:49:14,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:49:45] 2025-07-26 16:49:14,153 | INFO     | did not find any defunct processes belonging to 4011026
[2025-07-26 12:49:45] 2025-07-26 16:49:14,165 | INFO     | did not find any defunct processes belonging to 4011026
[2025-07-26 12:49:45] 2025-07-26 16:49:14,165 | INFO     | ready for new job
[2025-07-26 12:49:45] 2025-07-26 16:49:14,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:49:45] 2025-07-26 16:49:14,167 | INFO     | ***************************************
[2025-07-26 12:49:45] 2025-07-26 16:49:14,167 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:49:45] 2025-07-26 16:49:14,167 | INFO     | ***************************************
[2025-07-26 12:49:45] 2025-07-26 16:49:14,167 | INFO     | 
[2025-07-26 12:49:45] 2025-07-26 16:49:14,171 | INFO     | architecture information:
[2025-07-26 12:49:45] 2025-07-26 16:49:14,171 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:49:45] 2025-07-26 16:49:14,181 | INFO     | cat /etc/os-release:
[2025-07-26 12:49:45] NAME="CentOS Linux"
[2025-07-26 12:49:45] VERSION="7 (Core)"
[2025-07-26 12:49:45] ID="centos"
[2025-07-26 12:49:45] ID_LIKE="rhel fedora"
[2025-07-26 12:49:45] VERSION_ID="7"
[2025-07-26 12:49:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:49:45] ANSI_COLOR="0;31"
[2025-07-26 12:49:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:49:45] HOME_URL="https://www.centos.org/"
[2025-07-26 12:49:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:49:45] 
[2025-07-26 12:49:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:49:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:49:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:49:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:49:45] 
[2025-07-26 12:49:45] 2025-07-26 16:49:14,182 | INFO     | ***************************************
[2025-07-26 12:49:45] 2025-07-26 16:49:14,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-07-26 12:49:45] 2025-07-26 16:49:14,702 | INFO     | sufficient remaining disk space (165913034752 B)
[2025-07-26 12:49:45] 2025-07-26 16:49:14,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:49:45] 2025-07-26 16:49:14,703 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:49:45] 2025-07-26 16:49:14,703 | INFO     | update_server=False
[2025-07-26 12:49:45] 2025-07-26 16:49:14,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:49:45] 2025-07-26 16:49:14,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:49:45] 2025-07-26 16:49:15,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:49:45] 2025-07-26 16:49:15,249 | INFO     | aborting loop
[2025-07-26 12:49:45] 2025-07-26 16:49:15,281 | INFO     | all payload control threads have been joined
[2025-07-26 12:49:45] 2025-07-26 16:49:15,391 | INFO     | all data control threads have been joined
[2025-07-26 12:49:45] 2025-07-26 16:49:15,708 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:15,912 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,254 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,286 | INFO     | [payload] control thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,304 | INFO     | all job control threads have been joined
[2025-07-26 12:49:45] 2025-07-26 16:49:16,396 | INFO     | [data] control thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:49:45] 2025-07-26 16:49:16,617 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,638 | INFO     | [job] validate thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,709 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,712 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,863 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,928 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:16,950 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:17,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:49:45] 2025-07-26 16:49:17,309 | INFO     | [job] control thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:18,310 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:20,429 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:25,056 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:49:45] 2025-07-26 16:49:26,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:49:45] 2025-07-26 16:49:27,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661882861376)>', '<ExcThread(monitor, started 140660581594880)>']
[2025-07-26 12:49:45] 2025-07-26 16:49:32,628 | INFO     | all workflow threads have been joined
[2025-07-26 12:49:45] 2025-07-26 16:49:32,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:49:45] 2025-07-26 16:49:32,628 | INFO     | traces error code: 0
[2025-07-26 12:49:45] 2025-07-26 16:49:32,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:49:45] 2025-07-26 16:49:43,668 | INFO     | 3317s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-26 12:49:45] 2025-07-26 16:49:45,095 | INFO     | PID=4004561 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:49:45] 2025-07-26 16:49:45,095 | INFO     | .. there are 16 such processes running
[2025-07-26 12:49:45] 2025-07-26 16:49:45,096 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:49:45] 2025-07-26 16:49:45,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:49:45] 2025-07-26 16:49:45,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:49:45] 2025-07-26 16:49:45,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:49:45] 2025-07-26 16:49:45,096 | INFO     | [monitor] control thread has ended
[2025-07-26 12:49:45] 2025-07-26 16:49:45,174 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:49:45] 2025-07-26 16:49:45,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:49:45] 2025-07-26 16:49:45,178 [wrapper] pilotpid: 4004561
[2025-07-26 12:49:45] 2025-07-26 16:49:45,180 [wrapper] Pilot exit status: 0
[2025-07-26 12:49:45] 2025-07-26 16:49:45,188 [wrapper] pandaids: 6745132988
[2025-07-26 12:49:45] 2025-07-26 16:49:45,267 [wrapper] cleanup supervisor_pilot   61872 4004562
[2025-07-26 12:49:45] 2025-07-26 16:49:45,269 [wrapper] Test setup, not cleaning
[2025-07-26 12:49:45] 2025-07-26 16:49:45,271 [wrapper] apfmon messages muted
[2025-07-26 12:49:45] 2025-07-26 16:49:45,273 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:49:45] 2025-07-26 16:49:45,274 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:49:45]  *** Error codes and diagnostics ***
[2025-07-26 12:49:45]     "exeErrorCode": 0,
[2025-07-26 12:49:45]     "exeErrorDiag": "",
[2025-07-26 12:49:45]     "pilotErrorCode": 0,
[2025-07-26 12:49:45]     "pilotErrorDiag": "",
[2025-07-26 12:49:45]  *** Listing of results directory ***
[2025-07-26 12:49:45] total 356672
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 06:19 pilot3.tar.gz
[2025-07-26 12:49:45] -rwx------. 1 boincer umatlas     36292 Jul 26 06:20 runpilot2-wrapper.sh
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 06:20 queuedata.json
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:49:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:53 run_atlas
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:53 job.xml
[2025-07-26 12:49:45] -rw-r--r--. 2 boincer umatlas 146888240 Jul 26 11:53 EVNT.45743347._002069.pool.root.1
[2025-07-26 12:49:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:53 start_atlas.sh
[2025-07-26 12:49:45] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:53 shared
[2025-07-26 12:49:45] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 11:53 input.tar.gz
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:53 boinc_lockfile
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 11:53 pandaJob.out
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas    980133 Jul 26 11:53 agis_schedconf.cvmfs.json
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:53 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:49:45] drwx------. 4 boincer umatlas      4096 Jul 26 11:53 pilot3
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 12:45 init_data.xml
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas       529 Jul 26 12:48 boinc_task_state.xml
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas 213214050 Jul 26 12:48 HITS.45743349._036284.pool.root.1
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas      1030 Jul 26 12:49 memory_monitor_summary.json
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas    282584 Jul 26 12:49 log.45743349._036284.job.log.tgz.1
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas        95 Jul 26 12:49 pilot_heartbeat.json
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas      7765 Jul 26 12:49 heartbeat.json
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:49 wrapper_checkpoint.txt
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:49 boinc_mmap_file
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas       938 Jul 26 12:49 pilotlog.txt
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas    342823 Jul 26 12:49 log.45743349._036284.job.log.1
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas       357 Jul 26 12:49 output.list
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:49 runtime_log
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas    645120 Jul 26 12:49 result.tar.gz
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 12:49 runtime_log.err
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas       652 Jul 26 12:49 fwANDmkBrz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGd0KDmNwaaOn.diag
[2025-07-26 12:49:45] -rw-r--r--. 1 boincer umatlas     21973 Jul 26 12:49 stderr.txt
[2025-07-26 12:49:45] HITS file was successfully produced:
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas 213214050 Jul 26 12:48 shared/HITS.pool.root.1
[2025-07-26 12:49:45]  *** Contents of shared directory: ***
[2025-07-26 12:49:45] total 352856
[2025-07-26 12:49:45] -rw-r--r--. 2 boincer umatlas 146888240 Jul 26 11:53 ATLAS.root_0
[2025-07-26 12:49:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:53 start_atlas.sh
[2025-07-26 12:49:45] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 11:53 input.tar.gz
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas 213214050 Jul 26 12:48 HITS.pool.root.1
[2025-07-26 12:49:45] -rw-------. 1 boincer umatlas    645120 Jul 26 12:49 result.tar.gz
12:49:47 (4000827): run_atlas exited; CPU time 24801.937216
12:49:47 (4000827): called boinc_finish(0)

</stderr_txt>
]]>

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