Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
02:49:57 (3055380): wrapper (7.7.26015): starting
02:49:57 (3055380): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 02:49:57] Arguments: --nthreads 6
[2025-07-28 02:49:57] Threads: 6
[2025-07-28 02:49:57] Checking for CVMFS
[2025-07-28 02:49:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 02:49:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 02:49:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 02:49:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 02:49:57] 2.12.7.0 1004224 7945 63148 148829 0 57 3765603 6144000 0 130560 0 5730064 99.989 288868 3102 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-28 02:49:57] CVMFS is ok
[2025-07-28 02:49:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 02:49:57] Checking for apptainer binary...
[2025-07-28 02:49:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 02:49:57] Running /usr/bin/apptainer --version
[2025-07-28 02:49:57] apptainer version 1.4.0
[2025-07-28 02:49:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 02:49:57] Beta
[2025-07-28 02:49:57] apptainer works
[2025-07-28 02:49:57] Set ATHENA_PROC_NUMBER=6
[2025-07-28 02:49:57] Set ATHENA_CORE_NUMBER=6
[2025-07-28 02:49:57] Starting ATLAS job with PandaID=6745099763
[2025-07-28 02:49:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 04:16:22]  *** The last 200 lines of the pilot log: ***
[2025-07-28 04:16:22]  is_tar=False
[2025-07-28 04:16:22]  lfn=log.45743349._034405.job.log.tgz.1
[2025-07-28 04:16:22]  mtime=0
[2025-07-28 04:16:22]  protocol_id=None
[2025-07-28 04:16:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 04:16:22]  replicas=None
[2025-07-28 04:16:22]  scope=mc23_13p6TeV
[2025-07-28 04:16:22]  status=None
[2025-07-28 04:16:22]  status_code=0
[2025-07-28 04:16:22]  storage_token=
[2025-07-28 04:16:22]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745099763/log.45743349._034405.job.log.tgz.1
[2025-07-28 04:16:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/0b/log.45743349._034405.job.log.tgz.1
[2025-07-28 04:16:22]  workdir=None
[2025-07-28 04:16:22] ]
[2025-07-28 04:16:22] 2025-07-28 02:15:43,579 | INFO     | transferring file log.45743349._034405.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745099763/log.45743349._034405.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 04:16:22] 2025-07-28 02:15:43,579 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745099763/log.45743349._034405.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._034405.job
[2025-07-28 04:16:22] 2025-07-28 02:15:43,588 | INFO     | adding to output.list: log.45743349._034405.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/0b/log.45743349._034405.job.log.tg
[2025-07-28 04:16:22] 2025-07-28 02:15:43,589 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 04:16:22] 2025-07-28 02:15:43,589 | INFO     | summary of transferred files:
[2025-07-28 04:16:22] 2025-07-28 02:15:43,589 | INFO     |  -- lfn=log.45743349._034405.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 04:16:22] 2025-07-28 02:15:43,589 | INFO     | stage-out finished correctly
[2025-07-28 04:16:22] 2025-07-28 02:15:44,331 | INFO     | monitor loop #394: job 0:6745099763 is in state 'finished'
[2025-07-28 04:16:22] 2025-07-28 02:15:44,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 04:16:22] 2025-07-28 02:15:46,431 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 04:16:22] 2025-07-28 02:15:46,471 | INFO     | job 6745099763 has state=finished
[2025-07-28 04:16:22] 2025-07-28 02:15:46,471 | INFO     | preparing for final server update for job 6745099763 in state='finished'
[2025-07-28 04:16:22] 2025-07-28 02:15:46,472 | INFO     | this job has now completed (state=finished)
[2025-07-28 04:16:22] 2025-07-28 02:15:46,472 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 04:16:22] 2025-07-28 02:15:46,472 | INFO     | log transfer has been attempted: DONE
[2025-07-28 04:16:22] 2025-07-28 02:15:46,472 | INFO     | job 6745099763 has finished - writing final server update
[2025-07-28 04:16:22] 2025-07-28 02:15:46,472 | INFO     | total number of processed events: 400 (read)
[2025-07-28 04:16:22] 2025-07-28 02:15:46,473 | INFO     | executing command: lscpu
[2025-07-28 04:16:22] 2025-07-28 02:15:46,484 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 04:16:22] 2025-07-28 02:15:46,834 | INFO     | monitor loop #395: job 0:6745099763 is in state 'finished'
[2025-07-28 04:16:22] 2025-07-28 02:15:46,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 04:16:22] 2025-07-28 02:15:49,338 | INFO     | monitor loop #396: job 0:6745099763 is in state 'finished'
[2025-07-28 04:16:22] 2025-07-28 02:15:49,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 04:16:22] 2025-07-28 02:15:50,334 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 04:16:22] 2025-07-28 02:15:50,335 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3700.0307500000004
[2025-07-28 04:16:22] 2025-07-28 02:15:50,336 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745099763/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 04:16:22] 2025-07-28 02:15:50,336 | INFO     | extracted standard info from prmon json
[2025-07-28 04:16:22] 2025-07-28 02:15:50,336 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 04:16:22] 2025-07-28 02:15:50,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 04:16:22] 2025-07-28 02:15:50,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 04:16:22] 2025-07-28 02:15:50,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 04:16:22] 2025-07-28 02:15:50,337 | INFO     | fitting pss+swap vs Time
[2025-07-28 04:16:22] 2025-07-28 02:15:50,337 | INFO     | sum of square deviations: 141539398.0
[2025-07-28 04:16:22] 2025-07-28 02:15:50,337 | INFO     | sum of deviations: -11706641516.000002
[2025-07-28 04:16:22] 2025-07-28 02:15:50,337 | INFO     | mean x: 1753666444.0
[2025-07-28 04:16:22] 2025-07-28 02:15:50,337 | INFO     | mean y: 2612706.883116883
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | -- intersect: 145047347166.9413
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | intersect: 145047347166.9413
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | chi2: 0.12471785569197603
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | -- intersect: 145047347166.9413
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | current memory leak: -82.71 B/s (using 77 data points, chi2=0.12)
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | ..............................
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | . Timing measurements:
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | . get job = 0 s
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | . initial setup = 1 s
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | . payload setup = 3 s
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | . stage-in = 0 s
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | . payload execution = 5121 s
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | . stage-out = 0 s
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | . log creation = 0 s
[2025-07-28 04:16:22] 2025-07-28 02:15:50,338 | INFO     | ..............................
[2025-07-28 04:16:22] 2025-07-28 02:15:50,536 | INFO     | 
[2025-07-28 04:16:22] 2025-07-28 02:15:50,536 | INFO     | job summary report
[2025-07-28 04:16:22] 2025-07-28 02:15:50,536 | INFO     | --------------------------------------------------
[2025-07-28 04:16:22] 2025-07-28 02:15:50,537 | INFO     | PanDA job id: 6745099763
[2025-07-28 04:16:22] 2025-07-28 02:15:50,537 | INFO     | task id: 45743349
[2025-07-28 04:16:22] 2025-07-28 02:15:50,537 | INFO     | errors: (none)
[2025-07-28 04:16:22] 2025-07-28 02:15:50,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 04:16:22] 2025-07-28 02:15:50,538 | INFO     | pilot state: finished 
[2025-07-28 04:16:22] 2025-07-28 02:15:50,538 | INFO     | transexitcode: 0
[2025-07-28 04:16:22] 2025-07-28 02:15:50,538 | INFO     | exeerrorcode: 0
[2025-07-28 04:16:22] 2025-07-28 02:15:50,539 | INFO     | exeerrordiag: 
[2025-07-28 04:16:22] 2025-07-28 02:15:50,539 | INFO     | exitcode: 0
[2025-07-28 04:16:22] 2025-07-28 02:15:50,539 | INFO     | exitmsg: OK
[2025-07-28 04:16:22] 2025-07-28 02:15:50,540 | INFO     | cpuconsumptiontime: 29385 s
[2025-07-28 04:16:22] 2025-07-28 02:15:50,540 | INFO     | nevents: 400
[2025-07-28 04:16:22] 2025-07-28 02:15:50,540 | INFO     | neventsw: 0
[2025-07-28 04:16:22] 2025-07-28 02:15:50,541 | INFO     | pid: 3065471
[2025-07-28 04:16:22] 2025-07-28 02:15:50,541 | INFO     | pgrp: 3065471
[2025-07-28 04:16:22] 2025-07-28 02:15:50,541 | INFO     | corecount: 6
[2025-07-28 04:16:22] 2025-07-28 02:15:50,541 | INFO     | event service: False
[2025-07-28 04:16:22] 2025-07-28 02:15:50,542 | INFO     | sizes: {0: 2397473, 2: 2397735, 11: 2397763, 5127: 2424198, 5128: 2433196, 5131: 2433252, 5135: 2433574}
[2025-07-28 04:16:22] 2025-07-28 02:15:50,542 | INFO     | --------------------------------------------------
[2025-07-28 04:16:22] 2025-07-28 02:15:50,542 | INFO     | 
[2025-07-28 04:16:22] 2025-07-28 02:15:50,542 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | job 6745099763 has completed (purged errors)
[2025-07-28 04:16:22] 2025-07-28 02:15:50,557 | INFO     | overall cleanup function is called
[2025-07-28 04:16:22] 2025-07-28 02:15:51,564 | INFO     | --- collectZombieJob: --- 10, [3065471]
[2025-07-28 04:16:22] 2025-07-28 02:15:51,566 | INFO     | zombie collector waiting for pid 3065471
[2025-07-28 04:16:22] 2025-07-28 02:15:51,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 04:16:22] 2025-07-28 02:15:51,567 | INFO     | collected zombie processes
[2025-07-28 04:16:22] 2025-07-28 02:15:51,567 | INFO     | will attempt to kill all subprocesses of pid=3065471
[2025-07-28 04:16:22] 2025-07-28 02:15:51,621 | INFO     | process IDs to be killed: [3065471] (in reverse order)
[2025-07-28 04:16:22] 2025-07-28 02:15:51,641 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 04:16:22] 2025-07-28 02:15:51,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 04:16:22] 2025-07-28 02:15:51,643 | INFO     | did not find any defunct processes belonging to 3065471
[2025-07-28 04:16:22] 2025-07-28 02:15:51,644 | INFO     | did not find any defunct processes belonging to 3065471
[2025-07-28 04:16:22] 2025-07-28 02:15:51,644 | INFO     | ready for new job
[2025-07-28 04:16:22] 2025-07-28 02:15:51,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 04:16:22] 2025-07-28 02:15:51,645 | INFO     | ***************************************
[2025-07-28 04:16:22] 2025-07-28 02:15:51,645 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 04:16:22] 2025-07-28 02:15:51,645 | INFO     | ***************************************
[2025-07-28 04:16:22] 2025-07-28 02:15:51,645 | INFO     | 
[2025-07-28 04:16:22] 2025-07-28 02:15:51,646 | INFO     | architecture information:
[2025-07-28 04:16:22] 2025-07-28 02:15:51,646 | INFO     | executing command: cat /etc/os-release
[2025-07-28 04:16:22] 2025-07-28 02:15:51,652 | INFO     | cat /etc/os-release:
[2025-07-28 04:16:22] NAME="CentOS Linux"
[2025-07-28 04:16:22] VERSION="7 (Core)"
[2025-07-28 04:16:22] ID="centos"
[2025-07-28 04:16:22] ID_LIKE="rhel fedora"
[2025-07-28 04:16:22] VERSION_ID="7"
[2025-07-28 04:16:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 04:16:22] ANSI_COLOR="0;31"
[2025-07-28 04:16:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 04:16:22] HOME_URL="https://www.centos.org/"
[2025-07-28 04:16:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 04:16:22] 
[2025-07-28 04:16:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 04:16:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 04:16:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 04:16:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 04:16:22] 
[2025-07-28 04:16:22] 2025-07-28 02:15:51,653 | INFO     | ***************************************
[2025-07-28 04:16:22] 2025-07-28 02:15:52,156 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 04:16:22] 2025-07-28 02:15:52,169 | INFO     | sufficient remaining disk space (267027218432 B)
[2025-07-28 04:16:22] 2025-07-28 02:15:52,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 04:16:22] 2025-07-28 02:15:52,169 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 04:16:22] 2025-07-28 02:15:52,169 | INFO     | update_server=False
[2025-07-28 04:16:22] 2025-07-28 02:15:52,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 04:16:22] 2025-07-28 02:15:52,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 04:16:22] 2025-07-28 02:15:52,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:16:22] 2025-07-28 02:15:52,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 04:16:22] 2025-07-28 02:15:52,497 | INFO     | all payload control threads have been joined
[2025-07-28 04:16:22] 2025-07-28 02:15:52,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:16:22] 2025-07-28 02:15:52,844 | INFO     | aborting loop
[2025-07-28 04:16:22] 2025-07-28 02:15:52,980 | INFO     | all data control threads have been joined
[2025-07-28 04:16:22] 2025-07-28 02:15:53,175 | INFO     | [job] retrieve thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:53,176 | INFO     | [job] queue monitor thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:53,182 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:53,335 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:53,424 | INFO     | all job control threads have been joined
[2025-07-28 04:16:22] 2025-07-28 02:15:53,431 | INFO     | [payload] validate_post thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:53,501 | INFO     | [payload] control thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:53,625 | INFO     | [data] copytool_in thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:53,850 | INFO     | [job] job monitor thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:53,985 | INFO     | [data] control thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:54,101 | INFO     | [payload] failed_post thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:54,176 | INFO     | [data] copytool_out thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:54,298 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:54,430 | INFO     | [job] control thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:54,599 | INFO     | [job] validate thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:54,632 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:56,484 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 04:16:22] 2025-07-28 02:15:58,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950877595456)>', '<ExcThread(monitor, started 139950536242944)>']
[2025-07-28 04:16:22] 2025-07-28 02:16:03,235 | INFO     | all workflow threads have been joined
[2025-07-28 04:16:22] 2025-07-28 02:16:03,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 04:16:22] 2025-07-28 02:16:03,265 | INFO     | traces error code: 0
[2025-07-28 04:16:22] 2025-07-28 02:16:03,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 04:16:22] 2025-07-28 02:16:22,494 | INFO     | PID=3059007 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 04:16:22] 2025-07-28 02:16:22,495 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 04:16:22] 2025-07-28 02:16:22,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 04:16:22] 2025-07-28 02:16:22,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 04:16:22] 2025-07-28 02:16:22,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 04:16:22] 2025-07-28 02:16:22,495 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 04:16:22] 2025-07-28 02:16:22,495 | INFO     | [monitor] control thread has ended
[2025-07-28 04:16:22] 2025-07-28 02:16:22,556 [wrapper] ==== pilot stdout END ====
[2025-07-28 04:16:22] 2025-07-28 02:16:22,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 04:16:22] 2025-07-28 02:16:22,560 [wrapper] pilotpid: 3059007
[2025-07-28 04:16:22] 2025-07-28 02:16:22,561 [wrapper] Pilot exit status: 0
[2025-07-28 04:16:22] 2025-07-28 02:16:22,566 [wrapper] pandaids: 6745099763
[2025-07-28 04:16:22] 2025-07-28 02:16:22,581 [wrapper] cleanup supervisor_pilot 3077261 3059008
[2025-07-28 04:16:22] 2025-07-28 02:16:22,583 [wrapper] Test setup, not cleaning
[2025-07-28 04:16:22] 2025-07-28 02:16:22,584 [wrapper] apfmon messages muted
[2025-07-28 04:16:22] 2025-07-28 02:16:22,586 [wrapper] ==== wrapper stdout END ====
[2025-07-28 04:16:22] 2025-07-28 02:16:22,587 [wrapper] ==== wrapper stderr END ====
[2025-07-28 04:16:22]  *** Error codes and diagnostics ***
[2025-07-28 04:16:22]     "exeErrorCode": 0,
[2025-07-28 04:16:22]     "exeErrorDiag": "",
[2025-07-28 04:16:22]     "pilotErrorCode": 0,
[2025-07-28 04:16:22]     "pilotErrorDiag": "",
[2025-07-28 04:16:22]  *** Listing of results directory ***
[2025-07-28 04:16:22] insgesamt 357060
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc    530466 26. Jul 09:16 pilot3.tar.gz
[2025-07-28 04:16:22] -rwx------ 1 boinc boinc     36292 26. Jul 09:34 runpilot2-wrapper.sh
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc      5112 26. Jul 09:34 queuedata.json
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc       100 28. Jul 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 04:16:22] -rwxr-xr-x 1 boinc boinc      7986 28. Jul 02:49 run_atlas
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc       105 28. Jul 02:49 job.xml
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc      6722 28. Jul 02:49 init_data.xml
[2025-07-28 04:16:22] -rw-r--r-- 2 boinc boinc 147882438 28. Jul 02:49 EVNT.45743347._001948.pool.root.1
[2025-07-28 04:16:22] drwxrwx--x 2 boinc boinc      4096 28. Jul 02:49 shared
[2025-07-28 04:16:22] -rw-r--r-- 2 boinc boinc    542888 28. Jul 02:49 input.tar.gz
[2025-07-28 04:16:22] -rw-r--r-- 2 boinc boinc     15095 28. Jul 02:49 start_atlas.sh
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc         0 28. Jul 02:49 boinc_lockfile
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc      2562 28. Jul 02:49 pandaJob.out
[2025-07-28 04:16:22] -rw------- 1 boinc boinc    980125 28. Jul 02:50 agis_schedconf.cvmfs.json
[2025-07-28 04:16:22] -rw------- 1 boinc boinc   1593052 28. Jul 02:50 agis_ddmendpoints.agis.ALL.json
[2025-07-28 04:16:22] drwx------ 4 boinc boinc      4096 28. Jul 02:50 pilot3
[2025-07-28 04:16:22] -rw------- 1 boinc boinc 212360330 28. Jul 04:15 HITS.45743349._034405.pool.root.1
[2025-07-28 04:16:22] -rw------- 1 boinc boinc        95 28. Jul 04:15 pilot_heartbeat.json
[2025-07-28 04:16:22] -rw------- 1 boinc boinc      1019 28. Jul 04:15 memory_monitor_summary.json
[2025-07-28 04:16:22] -rw------- 1 boinc boinc    261906 28. Jul 04:15 log.45743349._034405.job.log.tgz.1
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc       529 28. Jul 04:15 boinc_task_state.xml
[2025-07-28 04:16:22] -rw------- 1 boinc boinc      7749 28. Jul 04:15 heartbeat.json
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc        27 28. Jul 04:16 wrapper_checkpoint.txt
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc      8192 28. Jul 04:16 boinc_mmap_file
[2025-07-28 04:16:22] -rw------- 1 boinc boinc       817 28. Jul 04:16 pilotlog.txt
[2025-07-28 04:16:22] -rw------- 1 boinc boinc    494895 28. Jul 04:16 log.45743349._034405.job.log.1
[2025-07-28 04:16:22] -rw------- 1 boinc boinc       357 28. Jul 04:16 output.list
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc       620 28. Jul 04:16 runtime_log
[2025-07-28 04:16:22] -rw------- 1 boinc boinc    778240 28. Jul 04:16 result.tar.gz
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc      8602 28. Jul 04:16 runtime_log.err
[2025-07-28 04:16:22] -rw------- 1 boinc boinc       638 28. Jul 04:16 fizKDmcboz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfP0KDmiTdLon.diag
[2025-07-28 04:16:22] -rw-r--r-- 1 boinc boinc     21257 28. Jul 04:16 stderr.txt
[2025-07-28 04:16:22] HITS file was successfully produced:
[2025-07-28 04:16:22] -rw------- 1 boinc boinc 212360330 28. Jul 04:15 shared/HITS.pool.root.1
[2025-07-28 04:16:22]  *** Contents of shared directory: ***
[2025-07-28 04:16:22] insgesamt 353116
[2025-07-28 04:16:22] -rw-r--r-- 2 boinc boinc 147882438 28. Jul 02:49 ATLAS.root_0
[2025-07-28 04:16:22] -rw-r--r-- 2 boinc boinc    542888 28. Jul 02:49 input.tar.gz
[2025-07-28 04:16:22] -rw-r--r-- 2 boinc boinc     15095 28. Jul 02:49 start_atlas.sh
[2025-07-28 04:16:22] -rw------- 1 boinc boinc 212360330 28. Jul 04:15 HITS.pool.root.1
[2025-07-28 04:16:22] -rw------- 1 boinc boinc    778240 28. Jul 04:16 result.tar.gz
04:16:24 (3055380): run_atlas exited; CPU time 29438.978381
04:16:24 (3055380): called boinc_finish(0)

</stderr_txt>
]]>

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