Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:47:59 (3643873): wrapper (7.7.26015): starting
11:47:59 (3643873): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 11:47:59] Arguments: --nthreads 8
[2025-07-26 11:47:59] Threads: 8
[2025-07-26 11:47:59] Checking for CVMFS
[2025-07-26 11:47:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:47:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:47:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:47:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:47:59] 2.13.1.0 4026694 6934 93484 148782 2 188 20953900 40960000 12090 16776704 0 94760934 99.999 253807 59328 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 11:47:59] CVMFS is ok
[2025-07-26 11:47:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:47:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:47:59] Further information can be found at the LHC@home message board.
[2025-07-26 11:47:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:47:59] Checking for apptainer binary...
[2025-07-26 11:47:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:47:59] Running /usr/bin/apptainer --version
[2025-07-26 11:47:59] apptainer version 1.4.1-1.el9
[2025-07-26 11:47:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:48:00] c-208-38.aglt2.org
[2025-07-26 11:48:00] apptainer works
[2025-07-26 11:48:00] Set ATHENA_PROC_NUMBER=8
[2025-07-26 11:48:00] Set ATHENA_CORE_NUMBER=8
[2025-07-26 11:48:00] Starting ATLAS job with PandaID=6745132931
[2025-07-26 11:48:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:44:07]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:44:07]  is_tar=False
[2025-07-26 12:44:07]  lfn=log.45743349._036227.job.log.tgz.1
[2025-07-26 12:44:07]  mtime=0
[2025-07-26 12:44:07]  protocol_id=None
[2025-07-26 12:44:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 12:44:07]  replicas=None
[2025-07-26 12:44:07]  scope=mc23_13p6TeV
[2025-07-26 12:44:07]  status=None
[2025-07-26 12:44:07]  status_code=0
[2025-07-26 12:44:07]  storage_token=
[2025-07-26 12:44:07]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6745132931/log.45743349._036227.job.log.tgz.1
[2025-07-26 12:44:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/93/log.45743349._036227.job.log.tgz.1
[2025-07-26 12:44:07]  workdir=None
[2025-07-26 12:44:07] ]
[2025-07-26 12:44:07] 2025-07-26 16:43:28,303 | INFO     | transferring file log.45743349._036227.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6745132931/log.45743349._036227.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 12:44:07] 2025-07-26 16:43:28,303 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6745132931/log.45743349._036227.job.log.tgz.1 /tmp/boinchome/slots/6/log.45743349._036227.job
[2025-07-26 12:44:07] 2025-07-26 16:43:28,319 | INFO     | adding to output.list: log.45743349._036227.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/93/log.45743349._036227.job.log.tg
[2025-07-26 12:44:07] 2025-07-26 16:43:28,320 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:44:07] 2025-07-26 16:43:28,320 | INFO     | summary of transferred files:
[2025-07-26 12:44:07] 2025-07-26 16:43:28,320 | INFO     |  -- lfn=log.45743349._036227.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:44:07] 2025-07-26 16:43:28,320 | INFO     | stage-out finished correctly
[2025-07-26 12:44:07] 2025-07-26 16:43:29,264 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:44:07] 2025-07-26 16:43:30,379 | WARNING  | process 3654104 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 12:44:07] 2025-07-26 16:43:30,379 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6745132931/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:44:07] 2025-07-26 16:43:30,697 | INFO     | number of running child processes to parent process 3654104: 1
[2025-07-26 12:44:07] 2025-07-26 16:43:30,697 | INFO     | maximum number of monitored processes: 6
[2025-07-26 12:44:07] 2025-07-26 16:43:31,157 | INFO     | job 6745132931 has state=finished
[2025-07-26 12:44:07] 2025-07-26 16:43:31,157 | INFO     | preparing for final server update for job 6745132931 in state='finished'
[2025-07-26 12:44:07] 2025-07-26 16:43:31,157 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:44:07] 2025-07-26 16:43:31,157 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:44:07] 2025-07-26 16:43:31,157 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:44:07] 2025-07-26 16:43:31,157 | INFO     | job 6745132931 has finished - writing final server update
[2025-07-26 12:44:07] 2025-07-26 16:43:31,158 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:44:07] 2025-07-26 16:43:31,158 | INFO     | executing command: lscpu
[2025-07-26 12:44:07] 2025-07-26 16:43:31,210 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:44:07] 2025-07-26 16:43:33,200 | INFO     | monitor loop #246: job 0:6745132931 is in state 'finished'
[2025-07-26 12:44:07] 2025-07-26 16:43:33,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:44:07] 2025-07-26 16:43:34,125 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 12:44:07] 2025-07-26 16:43:34,130 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3709.644070312498
[2025-07-26 12:44:07] 2025-07-26 16:43:34,143 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6745132931/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:44:07] 2025-07-26 16:43:34,143 | INFO     | extracted standard info from prmon json
[2025-07-26 12:44:07] 2025-07-26 16:43:34,143 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:44:07] 2025-07-26 16:43:34,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:44:07] 2025-07-26 16:43:34,144 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:44:07] 2025-07-26 16:43:34,144 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | sum of square deviations: 32179208.0
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | sum of deviations: -144150747.0
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | mean x: 1753546620.0
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | mean y: 2521514.744680851
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | -- intersect: 7857750741.403246
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | intersect: 7857750741.403246
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | chi2: 0.0006593278955227659
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | -- intersect: 7857750741.403246
[2025-07-26 12:44:07] 2025-07-26 16:43:34,145 | INFO     | current memory leak: -4.48 B/s (using 47 data points, chi2=0.00)
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | could have reported an average CPU frequency of 3746 MHz (5 samples)
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | ..............................
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | . Timing measurements:
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | . get job = 0 s
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | . initial setup = 2 s
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | . payload setup = 4 s
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | . stage-in = 0 s
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | . payload execution = 3295 s
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | . stage-out = 0 s
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | . log creation = 0 s
[2025-07-26 12:44:07] 2025-07-26 16:43:34,146 | INFO     | ..............................
[2025-07-26 12:44:07] 2025-07-26 16:43:34,206 | INFO     | 
[2025-07-26 12:44:07] 2025-07-26 16:43:34,206 | INFO     | job summary report
[2025-07-26 12:44:07] 2025-07-26 16:43:34,206 | INFO     | --------------------------------------------------
[2025-07-26 12:44:07] 2025-07-26 16:43:34,206 | INFO     | PanDA job id: 6745132931
[2025-07-26 12:44:07] 2025-07-26 16:43:34,206 | INFO     | task id: 45743349
[2025-07-26 12:44:07] 2025-07-26 16:43:34,206 | INFO     | errors: (none)
[2025-07-26 12:44:07] 2025-07-26 16:43:34,206 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:44:07] 2025-07-26 16:43:34,206 | INFO     | pilot state: finished 
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | transexitcode: 0
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | exeerrorcode: 0
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | exeerrordiag: 
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | exitcode: 0
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | exitmsg: OK
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | cpuconsumptiontime: 24683 s
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | nevents: 400
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | neventsw: 0
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | pid: 3654104
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | pgrp: 3654104
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | corecount: 8
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | event service: False
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | sizes: {0: 2397304, 1: 2397503, 4: 2397765, 11: 2397793, 3304: 2423345, 3305: 2432343, 3306: 2432527, 3311: 2432753}
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | --------------------------------------------------
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | 
[2025-07-26 12:44:07] 2025-07-26 16:43:34,207 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,226 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:44:07] 2025-07-26 16:43:34,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:44:07] 2025-07-26 16:43:34,226 | INFO     | job 6745132931 has completed (purged errors)
[2025-07-26 12:44:07] 2025-07-26 16:43:34,226 | INFO     | overall cleanup function is called
[2025-07-26 12:44:07] 2025-07-26 16:43:35,232 | INFO     | --- collectZombieJob: --- 10, [3654104]
[2025-07-26 12:44:07] 2025-07-26 16:43:35,233 | INFO     | zombie collector waiting for pid 3654104
[2025-07-26 12:44:07] 2025-07-26 16:43:35,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:44:07] 2025-07-26 16:43:35,233 | INFO     | collected zombie processes
[2025-07-26 12:44:07] 2025-07-26 16:43:35,233 | INFO     | will attempt to kill all subprocesses of pid=3654104
[2025-07-26 12:44:07] 2025-07-26 16:43:35,578 | INFO     | process IDs to be killed: [3654104] (in reverse order)
[2025-07-26 12:44:07] 2025-07-26 16:43:35,686 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:44:07] 2025-07-26 16:43:35,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:44:07] 2025-07-26 16:43:35,700 | INFO     | did not find any defunct processes belonging to 3654104
[2025-07-26 12:44:07] 2025-07-26 16:43:35,711 | INFO     | did not find any defunct processes belonging to 3654104
[2025-07-26 12:44:07] 2025-07-26 16:43:35,712 | INFO     | ready for new job
[2025-07-26 12:44:07] 2025-07-26 16:43:35,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:44:07] 2025-07-26 16:43:35,713 | INFO     | ***************************************
[2025-07-26 12:44:07] 2025-07-26 16:43:35,713 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:44:07] 2025-07-26 16:43:35,713 | INFO     | ***************************************
[2025-07-26 12:44:07] 2025-07-26 16:43:35,713 | INFO     | 
[2025-07-26 12:44:07] 2025-07-26 16:43:35,717 | INFO     | architecture information:
[2025-07-26 12:44:07] 2025-07-26 16:43:35,717 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:44:07] 2025-07-26 16:43:35,727 | INFO     | cat /etc/os-release:
[2025-07-26 12:44:07] NAME="CentOS Linux"
[2025-07-26 12:44:07] VERSION="7 (Core)"
[2025-07-26 12:44:07] ID="centos"
[2025-07-26 12:44:07] ID_LIKE="rhel fedora"
[2025-07-26 12:44:07] VERSION_ID="7"
[2025-07-26 12:44:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:44:07] ANSI_COLOR="0;31"
[2025-07-26 12:44:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:44:07] HOME_URL="https://www.centos.org/"
[2025-07-26 12:44:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:44:07] 
[2025-07-26 12:44:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:44:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:44:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:44:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:44:07] 
[2025-07-26 12:44:07] 2025-07-26 16:43:35,727 | INFO     | ***************************************
[2025-07-26 12:44:07] 2025-07-26 16:43:36,230 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-07-26 12:44:07] 2025-07-26 16:43:36,242 | INFO     | sufficient remaining disk space (166326173696 B)
[2025-07-26 12:44:07] 2025-07-26 16:43:36,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:44:07] 2025-07-26 16:43:36,242 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:44:07] 2025-07-26 16:43:36,242 | INFO     | update_server=False
[2025-07-26 12:44:07] 2025-07-26 16:43:36,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:44:07] 2025-07-26 16:43:36,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:44:07] 2025-07-26 16:43:36,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:44:07] 2025-07-26 16:43:36,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:44:07] 2025-07-26 16:43:36,716 | INFO     | aborting loop
[2025-07-26 12:44:07] 2025-07-26 16:43:36,845 | INFO     | all data control threads have been joined
[2025-07-26 12:44:07] 2025-07-26 16:43:36,937 | INFO     | all job control threads have been joined
[2025-07-26 12:44:07] 2025-07-26 16:43:37,246 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:37,468 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:37,478 | INFO     | [job] validate thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:37,613 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:37,652 | INFO     | all payload control threads have been joined
[2025-07-26 12:44:07] 2025-07-26 16:43:37,685 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:37,722 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:37,814 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:37,850 | INFO     | [data] control thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:37,942 | INFO     | [job] control thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:38,312 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:38,390 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:38,446 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:38,493 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:38,657 | INFO     | [payload] control thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:39,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:44:07] 2025-07-26 16:43:40,218 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:40,248 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:44:07] 2025-07-26 16:43:41,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305486272320)>', '<ExcThread(monitor, started 140305122694912)>']
[2025-07-26 12:44:07] 2025-07-26 16:43:46,397 | INFO     | all workflow threads have been joined
[2025-07-26 12:44:07] 2025-07-26 16:43:46,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:44:07] 2025-07-26 16:43:46,397 | INFO     | traces error code: 0
[2025-07-26 12:44:07] 2025-07-26 16:43:46,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:44:07] 2025-07-26 16:44:07,587 | INFO     | PID=3647511 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:44:07] 2025-07-26 16:44:07,588 | INFO     | .. there are 15 such processes running
[2025-07-26 12:44:07] 2025-07-26 16:44:07,588 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:44:07] 2025-07-26 16:44:07,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:44:07] 2025-07-26 16:44:07,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:44:07] 2025-07-26 16:44:07,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:44:07] 2025-07-26 16:44:07,588 | INFO     | [monitor] control thread has ended
[2025-07-26 12:44:07] 2025-07-26 16:44:07,667 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:44:07] 2025-07-26 16:44:07,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:44:07] 2025-07-26 16:44:07,671 [wrapper] pilotpid: 3647511
[2025-07-26 12:44:07] 2025-07-26 16:44:07,673 [wrapper] Pilot exit status: 0
[2025-07-26 12:44:07] 2025-07-26 16:44:07,680 [wrapper] pandaids: 6745132931
[2025-07-26 12:44:07] 2025-07-26 16:44:07,757 [wrapper] cleanup supervisor_pilot 3932641 3647512
[2025-07-26 12:44:07] 2025-07-26 16:44:07,760 [wrapper] Test setup, not cleaning
[2025-07-26 12:44:07] 2025-07-26 16:44:07,763 [wrapper] apfmon messages muted
[2025-07-26 12:44:07] 2025-07-26 16:44:07,765 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:44:07] 2025-07-26 16:44:07,766 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:44:07]  *** Error codes and diagnostics ***
[2025-07-26 12:44:07]     "exeErrorCode": 0,
[2025-07-26 12:44:07]     "exeErrorDiag": "",
[2025-07-26 12:44:07]     "pilotErrorCode": 0,
[2025-07-26 12:44:07]     "pilotErrorDiag": "",
[2025-07-26 12:44:07]  *** Listing of results directory ***
[2025-07-26 12:44:07] total 355908
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 05:57 pilot3.tar.gz
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 06:15 queuedata.json
[2025-07-26 12:44:07] -rwx------. 1 boincer umatlas     36292 Jul 26 06:16 runpilot2-wrapper.sh
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:44:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:47 run_atlas
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:47 job.xml
[2025-07-26 12:44:07] -rw-r--r--. 2 boincer umatlas 145887194 Jul 26 11:47 EVNT.45743347._002065.pool.root.1
[2025-07-26 12:44:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:47 start_atlas.sh
[2025-07-26 12:44:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:47 shared
[2025-07-26 12:44:07] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 11:47 input.tar.gz
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:47 boinc_lockfile
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 11:48 pandaJob.out
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas    980133 Jul 26 11:48 agis_schedconf.cvmfs.json
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:48 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:44:07] drwx------. 4 boincer umatlas      4096 Jul 26 11:48 pilot3
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 12:36 init_data.xml
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas 213422366 Jul 26 12:43 HITS.45743349._036227.pool.root.1
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas       530 Jul 26 12:43 boinc_task_state.xml
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas        95 Jul 26 12:43 pilot_heartbeat.json
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas      1028 Jul 26 12:43 memory_monitor_summary.json
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas    289613 Jul 26 12:43 log.45743349._036227.job.log.tgz.1
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas      7764 Jul 26 12:43 heartbeat.json
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:44 wrapper_checkpoint.txt
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas       823 Jul 26 12:44 pilotlog.txt
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:44 boinc_mmap_file
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas    342875 Jul 26 12:44 log.45743349._036227.job.log.1
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas       357 Jul 26 12:44 output.list
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:44 runtime_log
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas    655360 Jul 26 12:44 result.tar.gz
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 12:44 runtime_log.err
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas       652 Jul 26 12:44 gVDMDmw7qz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKc0KDmBzs2Fo.diag
[2025-07-26 12:44:07] -rw-r--r--. 1 boincer umatlas     21609 Jul 26 12:44 stderr.txt
[2025-07-26 12:44:07] HITS file was successfully produced:
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas 213422366 Jul 26 12:43 shared/HITS.pool.root.1
[2025-07-26 12:44:07]  *** Contents of shared directory: ***
[2025-07-26 12:44:07] total 352084
[2025-07-26 12:44:07] -rw-r--r--. 2 boincer umatlas 145887194 Jul 26 11:47 ATLAS.root_0
[2025-07-26 12:44:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:47 start_atlas.sh
[2025-07-26 12:44:07] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 11:47 input.tar.gz
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas 213422366 Jul 26 12:43 HITS.pool.root.1
[2025-07-26 12:44:07] -rw-------. 1 boincer umatlas    655360 Jul 26 12:44 result.tar.gz
12:44:09 (3643873): run_atlas exited; CPU time 24751.744498
12:44:09 (3643873): called boinc_finish(0)

</stderr_txt>
]]>

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