Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:45:41 (3621644): wrapper (7.7.26015): starting
11:45:41 (3621644): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 11:45:41] Arguments: --nthreads 8
[2025-07-26 11:45:41] Threads: 8
[2025-07-26 11:45:41] Checking for CVMFS
[2025-07-26 11:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:45:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:45:41] 2.13.1.0 4026694 6931 94448 148782 1 188 20953900 40960000 12923 16776704 0 94699912 99.999 253807 59328 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 11:45:41] CVMFS is ok
[2025-07-26 11:45:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:45:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:45:41] Further information can be found at the LHC@home message board.
[2025-07-26 11:45:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:45:41] Checking for apptainer binary...
[2025-07-26 11:45:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:45:41] Running /usr/bin/apptainer --version
[2025-07-26 11:45:41] apptainer version 1.4.1-1.el9
[2025-07-26 11:45:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:45:41] c-208-38.aglt2.org
[2025-07-26 11:45:41] apptainer works
[2025-07-26 11:45:41] Set ATHENA_PROC_NUMBER=8
[2025-07-26 11:45:41] Set ATHENA_CORE_NUMBER=8
[2025-07-26 11:45:41] Starting ATLAS job with PandaID=6745103538
[2025-07-26 11:45:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:40:32]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:40:32]  is_tar=False
[2025-07-26 12:40:32]  lfn=log.45743349._036104.job.log.tgz.1
[2025-07-26 12:40:32]  mtime=0
[2025-07-26 12:40:32]  protocol_id=None
[2025-07-26 12:40:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 12:40:32]  replicas=None
[2025-07-26 12:40:32]  scope=mc23_13p6TeV
[2025-07-26 12:40:32]  status=None
[2025-07-26 12:40:32]  status_code=0
[2025-07-26 12:40:32]  storage_token=
[2025-07-26 12:40:32]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6745103538/log.45743349._036104.job.log.tgz.1
[2025-07-26 12:40:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/b9/log.45743349._036104.job.log.tgz.1
[2025-07-26 12:40:32]  workdir=None
[2025-07-26 12:40:32] ]
[2025-07-26 12:40:32] 2025-07-26 16:39:56,222 | INFO     | transferring file log.45743349._036104.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6745103538/log.45743349._036104.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 12:40:32] 2025-07-26 16:39:56,222 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6745103538/log.45743349._036104.job.log.tgz.1 /tmp/boinchome/slots/5/log.45743349._036104.job
[2025-07-26 12:40:32] 2025-07-26 16:39:56,237 | INFO     | adding to output.list: log.45743349._036104.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/b9/log.45743349._036104.job.log.tg
[2025-07-26 12:40:32] 2025-07-26 16:39:56,238 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:40:32] 2025-07-26 16:39:56,238 | INFO     | summary of transferred files:
[2025-07-26 12:40:32] 2025-07-26 16:39:56,238 | INFO     |  -- lfn=log.45743349._036104.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:40:32] 2025-07-26 16:39:56,238 | INFO     | stage-out finished correctly
[2025-07-26 12:40:32] 2025-07-26 16:39:56,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:40:32] 2025-07-26 16:39:57,798 | INFO     | job 6745103538 has state=finished
[2025-07-26 12:40:32] 2025-07-26 16:39:57,798 | INFO     | preparing for final server update for job 6745103538 in state='finished'
[2025-07-26 12:40:32] 2025-07-26 16:39:57,799 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:40:32] 2025-07-26 16:39:57,799 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:40:32] 2025-07-26 16:39:57,799 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:40:32] 2025-07-26 16:39:57,799 | INFO     | job 6745103538 has finished - writing final server update
[2025-07-26 12:40:32] 2025-07-26 16:39:57,799 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:40:32] 2025-07-26 16:39:57,800 | INFO     | executing command: lscpu
[2025-07-26 12:40:32] 2025-07-26 16:39:57,856 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:40:32] 2025-07-26 16:40:01,020 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 12:40:32] 2025-07-26 16:40:01,025 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3769.731679687497
[2025-07-26 12:40:32] 2025-07-26 16:40:01,038 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6745103538/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:40:32] 2025-07-26 16:40:01,038 | INFO     | extracted standard info from prmon json
[2025-07-26 12:40:32] 2025-07-26 16:40:01,038 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:40:32] 2025-07-26 16:40:01,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:40:32] 2025-07-26 16:40:01,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:40:32] 2025-07-26 16:40:01,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | sum of square deviations: 30168007.5
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | sum of deviations: -386493224.5
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | mean x: 1753546452.5
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | mean y: 2534741.586956522
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | -- intersect: 22467850780.018105
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | intersect: 22467850780.018105
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | chi2: 0.0010289633179442709
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | -- intersect: 22467850780.018105
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | current memory leak: -12.81 B/s (using 46 data points, chi2=0.00)
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | could have reported an average CPU frequency of 3759 MHz (5 samples)
[2025-07-26 12:40:32] 2025-07-26 16:40:01,040 | INFO     | ..............................
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | . Timing measurements:
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | . get job = 0 s
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | . initial setup = 2 s
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | . payload setup = 5 s
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | . stage-in = 0 s
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | . payload execution = 3220 s
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | . stage-out = 0 s
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | . log creation = 0 s
[2025-07-26 12:40:32] 2025-07-26 16:40:01,041 | INFO     | ..............................
[2025-07-26 12:40:32] 2025-07-26 16:40:01,133 | INFO     | 
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | job summary report
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | --------------------------------------------------
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | PanDA job id: 6745103538
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | task id: 45743349
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | errors: (none)
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | pilot state: finished 
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | transexitcode: 0
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | exeerrorcode: 0
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | exeerrordiag: 
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | exitcode: 0
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | exitmsg: OK
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | cpuconsumptiontime: 23704 s
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | nevents: 400
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | neventsw: 0
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | pid: 3632601
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | pgrp: 3632601
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | corecount: 8
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | event service: False
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | sizes: {0: 2397475, 1: 2397475, 4: 2397765, 11: 2397793, 3229: 2423345, 3230: 2432527, 3235: 2432697}
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | --------------------------------------------------
[2025-07-26 12:40:32] 2025-07-26 16:40:01,134 | INFO     | 
[2025-07-26 12:40:32] 2025-07-26 16:40:01,135 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-26 12:40:32] 2025-07-26 16:40:01,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | job 6745103538 has completed (purged errors)
[2025-07-26 12:40:32] 2025-07-26 16:40:01,154 | INFO     | overall cleanup function is called
[2025-07-26 12:40:32] 2025-07-26 16:40:01,499 | WARNING  | process 3632601 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 12:40:32] 2025-07-26 16:40:01,741 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:40:32] 2025-07-26 16:40:02,087 | INFO     | number of running child processes to parent process 3632601: 1
[2025-07-26 12:40:32] 2025-07-26 16:40:02,087 | INFO     | maximum number of monitored processes: 6
[2025-07-26 12:40:32] 2025-07-26 16:40:02,087 | INFO     | aborting job monitoring since job object (job id=6745103538) has expired
[2025-07-26 12:40:32] 2025-07-26 16:40:02,162 | INFO     | --- collectZombieJob: --- 10, [3632601]
[2025-07-26 12:40:32] 2025-07-26 16:40:02,162 | INFO     | zombie collector waiting for pid 3632601
[2025-07-26 12:40:32] 2025-07-26 16:40:02,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:40:32] 2025-07-26 16:40:02,162 | INFO     | collected zombie processes
[2025-07-26 12:40:32] 2025-07-26 16:40:02,162 | INFO     | will attempt to kill all subprocesses of pid=3632601
[2025-07-26 12:40:32] 2025-07-26 16:40:02,504 | INFO     | process IDs to be killed: [3632601] (in reverse order)
[2025-07-26 12:40:32] 2025-07-26 16:40:02,630 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:40:32] 2025-07-26 16:40:02,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:40:32] 2025-07-26 16:40:02,648 | INFO     | did not find any defunct processes belonging to 3632601
[2025-07-26 12:40:32] 2025-07-26 16:40:02,666 | INFO     | did not find any defunct processes belonging to 3632601
[2025-07-26 12:40:32] 2025-07-26 16:40:02,666 | INFO     | ready for new job
[2025-07-26 12:40:32] 2025-07-26 16:40:02,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:40:32] 2025-07-26 16:40:02,667 | INFO     | ***************************************
[2025-07-26 12:40:32] 2025-07-26 16:40:02,667 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:40:32] 2025-07-26 16:40:02,667 | INFO     | ***************************************
[2025-07-26 12:40:32] 2025-07-26 16:40:02,668 | INFO     | 
[2025-07-26 12:40:32] 2025-07-26 16:40:02,672 | INFO     | architecture information:
[2025-07-26 12:40:32] 2025-07-26 16:40:02,672 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:40:32] 2025-07-26 16:40:02,685 | INFO     | cat /etc/os-release:
[2025-07-26 12:40:32] NAME="CentOS Linux"
[2025-07-26 12:40:32] VERSION="7 (Core)"
[2025-07-26 12:40:32] ID="centos"
[2025-07-26 12:40:32] ID_LIKE="rhel fedora"
[2025-07-26 12:40:32] VERSION_ID="7"
[2025-07-26 12:40:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:40:32] ANSI_COLOR="0;31"
[2025-07-26 12:40:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:40:32] HOME_URL="https://www.centos.org/"
[2025-07-26 12:40:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:40:32] 
[2025-07-26 12:40:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:40:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:40:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:40:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:40:32] 
[2025-07-26 12:40:32] 2025-07-26 16:40:02,686 | INFO     | ***************************************
[2025-07-26 12:40:32] 2025-07-26 16:40:03,188 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-26 12:40:32] 2025-07-26 16:40:03,205 | INFO     | sufficient remaining disk space (166307299328 B)
[2025-07-26 12:40:32] 2025-07-26 16:40:03,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:40:32] 2025-07-26 16:40:03,206 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:40:32] 2025-07-26 16:40:03,206 | INFO     | update_server=False
[2025-07-26 12:40:32] 2025-07-26 16:40:03,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:40:32] 2025-07-26 16:40:03,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:40:32] 2025-07-26 16:40:03,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:40:32] 2025-07-26 16:40:03,207 | INFO     | aborting loop
[2025-07-26 12:40:32] 2025-07-26 16:40:03,274 | INFO     | all data control threads have been joined
[2025-07-26 12:40:32] 2025-07-26 16:40:03,766 | INFO     | all payload control threads have been joined
[2025-07-26 12:40:32] 2025-07-26 16:40:04,207 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:04,213 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:04,276 | INFO     | [data] control thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:04,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:40:32] 2025-07-26 16:40:04,317 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:04,586 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:04,625 | INFO     | all job control threads have been joined
[2025-07-26 12:40:32] 2025-07-26 16:40:04,728 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:04,771 | INFO     | [payload] control thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:05,157 | INFO     | [job] validate thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:05,354 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:05,393 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:05,467 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:05,631 | INFO     | [job] control thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:06,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:40:32] 2025-07-26 16:40:06,302 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:07,113 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:07,213 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:13,484 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:40:32] 2025-07-26 16:40:14,489 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:40:32] 2025-07-26 16:40:15,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461828835136)>', '<ExcThread(monitor, started 140461547161344)>']
[2025-07-26 12:40:32] 2025-07-26 16:40:20,685 | INFO     | all workflow threads have been joined
[2025-07-26 12:40:32] 2025-07-26 16:40:20,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:40:32] 2025-07-26 16:40:20,686 | INFO     | traces error code: 0
[2025-07-26 12:40:32] 2025-07-26 16:40:20,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:40:32] 2025-07-26 16:40:32,717 | INFO     | PID=3625258 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:40:32] 2025-07-26 16:40:32,718 | INFO     | .. there are 16 such processes running
[2025-07-26 12:40:32] 2025-07-26 16:40:32,719 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:40:32] 2025-07-26 16:40:32,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:40:32] 2025-07-26 16:40:32,719 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:40:32] 2025-07-26 16:40:32,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:40:32] 2025-07-26 16:40:32,719 | INFO     | [monitor] control thread has ended
[2025-07-26 12:40:32] 2025-07-26 16:40:32,797 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:40:32] 2025-07-26 16:40:32,800 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:40:32] 2025-07-26 16:40:32,803 [wrapper] pilotpid: 3625258
[2025-07-26 12:40:32] 2025-07-26 16:40:32,805 [wrapper] Pilot exit status: 0
[2025-07-26 12:40:32] 2025-07-26 16:40:32,813 [wrapper] pandaids: 6745103538
[2025-07-26 12:40:32] 2025-07-26 16:40:32,896 [wrapper] cleanup supervisor_pilot 3914505 3625259
[2025-07-26 12:40:32] 2025-07-26 16:40:32,898 [wrapper] Test setup, not cleaning
[2025-07-26 12:40:32] 2025-07-26 16:40:32,900 [wrapper] apfmon messages muted
[2025-07-26 12:40:32] 2025-07-26 16:40:32,902 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:40:32] 2025-07-26 16:40:32,905 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:40:32]  *** Error codes and diagnostics ***
[2025-07-26 12:40:32]     "exeErrorCode": 0,
[2025-07-26 12:40:32]     "exeErrorDiag": "",
[2025-07-26 12:40:32]     "pilotErrorCode": 0,
[2025-07-26 12:40:32]     "pilotErrorDiag": "",
[2025-07-26 12:40:32]  *** Listing of results directory ***
[2025-07-26 12:40:32] total 349324
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 05:57 pilot3.tar.gz
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 06:06 queuedata.json
[2025-07-26 12:40:32] -rwx------. 1 boincer umatlas     36292 Jul 26 06:07 runpilot2-wrapper.sh
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:40:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:45 run_atlas
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:45 job.xml
[2025-07-26 12:40:32] -rw-r--r--. 2 boincer umatlas 146825442 Jul 26 11:45 EVNT.45743347._002058.pool.root.1
[2025-07-26 12:40:32] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:45 start_atlas.sh
[2025-07-26 12:40:32] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:45 shared
[2025-07-26 12:40:32] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 11:45 input.tar.gz
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:45 boinc_lockfile
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 11:45 pandaJob.out
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas    980133 Jul 26 11:45 agis_schedconf.cvmfs.json
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:45 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:40:32] drwx------. 4 boincer umatlas      4096 Jul 26 11:45 pilot3
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 12:36 init_data.xml
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas 205764549 Jul 26 12:39 HITS.45743349._036104.pool.root.1
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas       529 Jul 26 12:39 boinc_task_state.xml
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas      1028 Jul 26 12:39 memory_monitor_summary.json
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas    283135 Jul 26 12:39 log.45743349._036104.job.log.tgz.1
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas      7767 Jul 26 12:40 heartbeat.json
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:40 boinc_mmap_file
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:40 wrapper_checkpoint.txt
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas       823 Jul 26 12:40 pilotlog.txt
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas        95 Jul 26 12:40 pilot_heartbeat.json
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas    336636 Jul 26 12:40 log.45743349._036104.job.log.1
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas       357 Jul 26 12:40 output.list
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:40 runtime_log
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas    634880 Jul 26 12:40 result.tar.gz
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas       651 Jul 26 12:40 yQvNDmnzqz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmra0KDmuaNl2m.diag
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 12:40 runtime_log.err
[2025-07-26 12:40:32] -rw-r--r--. 1 boincer umatlas     21544 Jul 26 12:40 stderr.txt
[2025-07-26 12:40:32] HITS file was successfully produced:
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas 205764549 Jul 26 12:39 shared/HITS.pool.root.1
[2025-07-26 12:40:32]  *** Contents of shared directory: ***
[2025-07-26 12:40:32] total 345508
[2025-07-26 12:40:32] -rw-r--r--. 2 boincer umatlas 146825442 Jul 26 11:45 ATLAS.root_0
[2025-07-26 12:40:32] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:45 start_atlas.sh
[2025-07-26 12:40:32] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 11:45 input.tar.gz
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas 205764549 Jul 26 12:39 HITS.pool.root.1
[2025-07-26 12:40:32] -rw-------. 1 boincer umatlas    634880 Jul 26 12:40 result.tar.gz
12:40:34 (3621644): run_atlas exited; CPU time 23767.419649
12:40:34 (3621644): called boinc_finish(0)

</stderr_txt>
]]>

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