Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:41:40 (1749633): wrapper (7.7.26015): starting
05:41:40 (1749633): wrapper: running run_atlas (--nthreads 6)
[2025-07-27 05:41:40] Arguments: --nthreads 6
[2025-07-27 05:41:40] Threads: 6
[2025-07-27 05:41:40] Checking for CVMFS
[2025-07-27 05:41:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:41:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:41:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:41:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:41:40] 2.11.5.0 3914476 3244 76364 148788 1 188 29203884 52428801 929 130560 2 5581642 99.995 118583 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-27 05:41:40] CVMFS is ok
[2025-07-27 05:41:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:41:40] Checking for apptainer binary...
[2025-07-27 05:41:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:41:40] Running /usr/bin/apptainer --version
[2025-07-27 05:41:40] apptainer version 1.3.6-1.el9
[2025-07-27 05:41:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:41:40] testio002
[2025-07-27 05:41:40] apptainer works
[2025-07-27 05:41:40] Set ATHENA_PROC_NUMBER=6
[2025-07-27 05:41:40] Set ATHENA_CORE_NUMBER=6
[2025-07-27 05:41:40] Starting ATLAS job with PandaID=6745103356
[2025-07-27 05:41:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:45:19]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:45:19]  mtime=0
[2025-07-27 06:45:19]  protocol_id=None
[2025-07-27 06:45:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 06:45:19]  replicas=None
[2025-07-27 06:45:19]  scope=mc23_13p6TeV
[2025-07-27 06:45:19]  status=None
[2025-07-27 06:45:19]  status_code=0
[2025-07-27 06:45:19]  storage_token=
[2025-07-27 06:45:19]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6745103356/log.45743349._035922.job.log.tgz.1
[2025-07-27 06:45:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/4d/log.45743349._035922.job.log.tgz.1
[2025-07-27 06:45:19]  workdir=None
[2025-07-27 06:45:19] ]
[2025-07-27 06:45:19] 2025-07-26 21:44:52,983 | INFO     | transferring file log.45743349._035922.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6745103356/log.45743349._035922.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 06:45:19] 2025-07-26 21:44:52,983 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6745103356/log.45743349._035922.job.log.tgz.1 /var/lib/boinc/slots/2/log.45743349._035922.job
[2025-07-27 06:45:19] 2025-07-26 21:44:52,989 | INFO     | adding to output.list: log.45743349._035922.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/4d/log.45743349._035922.job.log.tg
[2025-07-27 06:45:19] 2025-07-26 21:44:52,989 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 06:45:19] 2025-07-26 21:44:52,990 | INFO     | summary of transferred files:
[2025-07-27 06:45:19] 2025-07-26 21:44:52,990 | INFO     |  -- lfn=log.45743349._035922.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 06:45:19] 2025-07-26 21:44:52,990 | INFO     | stage-out finished correctly
[2025-07-27 06:45:19] 2025-07-26 21:44:53,638 | INFO     | monitor loop #280: job 0:6745103356 is in state 'finished'
[2025-07-27 06:45:19] 2025-07-26 21:44:53,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:19] 2025-07-26 21:44:56,102 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 06:45:19] 2025-07-26 21:44:56,140 | INFO     | monitor loop #281: job 0:6745103356 is in state 'finished'
[2025-07-27 06:45:19] 2025-07-26 21:44:56,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:19] 2025-07-26 21:44:58,468 | INFO     | job 6745103356 has state=finished
[2025-07-27 06:45:19] 2025-07-26 21:44:58,469 | INFO     | preparing for final server update for job 6745103356 in state='finished'
[2025-07-27 06:45:19] 2025-07-26 21:44:58,469 | INFO     | this job has now completed (state=finished)
[2025-07-27 06:45:19] 2025-07-26 21:44:58,469 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 06:45:19] 2025-07-26 21:44:58,469 | INFO     | log transfer has been attempted: DONE
[2025-07-27 06:45:19] 2025-07-26 21:44:58,469 | INFO     | job 6745103356 has finished - writing final server update
[2025-07-27 06:45:19] 2025-07-26 21:44:58,469 | INFO     | total number of processed events: 400 (read)
[2025-07-27 06:45:19] 2025-07-26 21:44:58,469 | INFO     | executing command: lscpu
[2025-07-27 06:45:19] 2025-07-26 21:44:58,476 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 06:45:19] 2025-07-26 21:44:58,642 | INFO     | monitor loop #282: job 0:6745103356 is in state 'finished'
[2025-07-27 06:45:19] 2025-07-26 21:44:58,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:19] 2025-07-26 21:44:59,369 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 06:45:19] 2025-07-26 21:44:59,370 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4253.8685
[2025-07-27 06:45:19] 2025-07-26 21:44:59,370 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6745103356/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:45:19] 2025-07-26 21:44:59,371 | INFO     | extracted standard info from prmon json
[2025-07-27 06:45:19] 2025-07-26 21:44:59,371 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:45:19] 2025-07-26 21:44:59,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:45:19] 2025-07-26 21:44:59,371 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:45:19] 2025-07-26 21:44:59,371 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:45:19] 2025-07-26 21:44:59,371 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:45:19] 2025-07-26 21:44:59,371 | INFO     | sum of square deviations: 51573060.0
[2025-07-27 06:45:19] 2025-07-26 21:44:59,371 | INFO     | sum of deviations: 8204458581.0
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | mean x: 1753564475.0
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | mean y: 2388568.3636363638
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | -- intersect: -278961999122.62286
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | intersect: -278961999122.62286
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | chi2: 1.3888200000967486
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | -- intersect: -278961999122.62286
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | current memory leak: 159.08 B/s (using 55 data points, chi2=1.39)
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | could have reported an average CPU frequency of 4349 MHz (6 samples)
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | ..............................
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | . Timing measurements:
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | . get job = 0 s
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | . initial setup = 4 s
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | . payload setup = 1 s
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | . stage-in = 0 s
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | . payload execution = 3768 s
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | . stage-out = 0 s
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | . log creation = 0 s
[2025-07-27 06:45:19] 2025-07-26 21:44:59,372 | INFO     | ..............................
[2025-07-27 06:45:19] 2025-07-26 21:44:59,398 | INFO     | 
[2025-07-27 06:45:19] 2025-07-26 21:44:59,398 | INFO     | job summary report
[2025-07-27 06:45:19] 2025-07-26 21:44:59,398 | INFO     | --------------------------------------------------
[2025-07-27 06:45:19] 2025-07-26 21:44:59,398 | INFO     | PanDA job id: 6745103356
[2025-07-27 06:45:19] 2025-07-26 21:44:59,398 | INFO     | task id: 45743349
[2025-07-27 06:45:19] 2025-07-26 21:44:59,398 | INFO     | errors: (none)
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | pilot state: finished 
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | transexitcode: 0
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | exeerrorcode: 0
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | exeerrordiag: 
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | exitcode: 0
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | exitmsg: OK
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | cpuconsumptiontime: 18223 s
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | nevents: 400
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | neventsw: 0
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | pid: 1759987
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | pgrp: 1759987
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | corecount: 6
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | event service: False
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | sizes: {0: 2397475, 2: 2397737, 11: 2397765, 3773: 2423626, 3774: 2432624, 3777: 2432680, 3780: 2433002}
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | --------------------------------------------------
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | 
[2025-07-27 06:45:19] 2025-07-26 21:44:59,399 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-07-27 06:45:19] 2025-07-26 21:44:59,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,406 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,406 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,406 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | job 6745103356 has completed (purged errors)
[2025-07-27 06:45:19] 2025-07-26 21:44:59,407 | INFO     | overall cleanup function is called
[2025-07-27 06:45:19] 2025-07-26 21:45:00,413 | INFO     | --- collectZombieJob: --- 10, [1759987]
[2025-07-27 06:45:19] 2025-07-26 21:45:00,413 | INFO     | zombie collector waiting for pid 1759987
[2025-07-27 06:45:19] 2025-07-26 21:45:00,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:45:19] 2025-07-26 21:45:00,413 | INFO     | collected zombie processes
[2025-07-27 06:45:19] 2025-07-26 21:45:00,413 | INFO     | will attempt to kill all subprocesses of pid=1759987
[2025-07-27 06:45:19] 2025-07-26 21:45:00,442 | INFO     | process IDs to be killed: [1759987] (in reverse order)
[2025-07-27 06:45:19] 2025-07-26 21:45:00,456 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:45:19] 2025-07-26 21:45:00,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:45:19] 2025-07-26 21:45:00,457 | INFO     | did not find any defunct processes belonging to 1759987
[2025-07-27 06:45:19] 2025-07-26 21:45:00,458 | INFO     | did not find any defunct processes belonging to 1759987
[2025-07-27 06:45:19] 2025-07-26 21:45:00,458 | INFO     | ready for new job
[2025-07-27 06:45:19] 2025-07-26 21:45:00,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:45:19] 2025-07-26 21:45:00,459 | INFO     | ***************************************
[2025-07-27 06:45:19] 2025-07-26 21:45:00,459 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:45:19] 2025-07-26 21:45:00,459 | INFO     | ***************************************
[2025-07-27 06:45:19] 2025-07-26 21:45:00,459 | INFO     | 
[2025-07-27 06:45:19] 2025-07-26 21:45:00,459 | INFO     | architecture information:
[2025-07-27 06:45:19] 2025-07-26 21:45:00,459 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:45:19] 2025-07-26 21:45:00,464 | INFO     | cat /etc/os-release:
[2025-07-27 06:45:19] NAME="CentOS Linux"
[2025-07-27 06:45:19] VERSION="7 (Core)"
[2025-07-27 06:45:19] ID="centos"
[2025-07-27 06:45:19] ID_LIKE="rhel fedora"
[2025-07-27 06:45:19] VERSION_ID="7"
[2025-07-27 06:45:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:45:19] ANSI_COLOR="0;31"
[2025-07-27 06:45:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:45:19] HOME_URL="https://www.centos.org/"
[2025-07-27 06:45:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:45:19] 
[2025-07-27 06:45:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:45:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:45:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:45:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:45:19] 
[2025-07-27 06:45:19] 2025-07-26 21:45:00,464 | INFO     | ***************************************
[2025-07-27 06:45:19] 2025-07-26 21:45:00,967 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-07-27 06:45:19] 2025-07-26 21:45:00,972 | INFO     | sufficient remaining disk space (316113158144 B)
[2025-07-27 06:45:19] 2025-07-26 21:45:00,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:45:19] 2025-07-26 21:45:00,972 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:45:19] 2025-07-26 21:45:00,972 | INFO     | update_server=False
[2025-07-27 06:45:19] 2025-07-26 21:45:00,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:45:19] 2025-07-26 21:45:00,973 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 06:45:19] 2025-07-26 21:45:00,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:45:19] 2025-07-26 21:45:00,973 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:45:19] 2025-07-26 21:45:00,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:45:19] 2025-07-26 21:45:00,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:45:19] 2025-07-26 21:45:01,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:45:19] 2025-07-26 21:45:01,145 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 06:45:19] 2025-07-26 21:45:01,145 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 06:45:19] 2025-07-26 21:45:01,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:45:19] 2025-07-26 21:45:01,145 | INFO     | will abort loop
[2025-07-27 06:45:19] 2025-07-26 21:45:01,467 | INFO     | all job control threads have been joined
[2025-07-27 06:45:19] 2025-07-26 21:45:01,491 | INFO     | all payload control threads have been joined
[2025-07-27 06:45:19] 2025-07-26 21:45:01,545 | INFO     | all data control threads have been joined
[2025-07-27 06:45:19] 2025-07-26 21:45:01,977 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:01,978 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:02,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:45:19] 2025-07-26 21:45:02,150 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:02,251 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:02,472 | INFO     | [job] control thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:02,496 | INFO     | [payload] control thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:02,550 | INFO     | [data] control thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:02,740 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:03,030 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:03,048 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:03,315 | INFO     | [job] validate thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:03,366 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:03,409 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:03,426 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:06,138 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:11,486 | INFO     | job.realtimelogging is not enabled
[2025-07-27 06:45:19] 2025-07-26 21:45:12,491 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:45:19] 2025-07-26 21:45:14,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140142244960064)>', '<ExcThread(monitor, started 140141603571456)>']
[2025-07-27 06:45:19] 2025-07-26 21:45:15,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:45:19] 2025-07-26 21:45:15,042 | INFO     | [monitor] control thread has ended
[2025-07-27 06:45:19] 2025-07-26 21:45:19,208 | INFO     | all workflow threads have been joined
[2025-07-27 06:45:19] 2025-07-26 21:45:19,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:45:19] 2025-07-26 21:45:19,208 | INFO     | traces error code: 0
[2025-07-27 06:45:19] 2025-07-26 21:45:19,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:45:19] 2025-07-26 21:45:19,241 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:45:19] 2025-07-26 21:45:19,242 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:45:19] 2025-07-26 21:45:19,243 [wrapper] pilotpid: 1753381
[2025-07-27 06:45:19] 2025-07-26 21:45:19,243 [wrapper] Pilot exit status: 0
[2025-07-27 06:45:19] 2025-07-26 21:45:19,246 [wrapper] pandaids: 6745103356
[2025-07-27 06:45:19] 2025-07-26 21:45:19,253 [wrapper] cleanup supervisor_pilot 1793155 1753382
[2025-07-27 06:45:19] 2025-07-26 21:45:19,253 [wrapper] Test setup, not cleaning
[2025-07-27 06:45:19] 2025-07-26 21:45:19,254 [wrapper] apfmon messages muted
[2025-07-27 06:45:19] 2025-07-26 21:45:19,255 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:45:19] 2025-07-26 21:45:19,255 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:45:19]  *** Error codes and diagnostics ***
[2025-07-27 06:45:19]     "exeErrorCode": 0,
[2025-07-27 06:45:19]     "exeErrorDiag": "",
[2025-07-27 06:45:19]     "pilotErrorCode": 0,
[2025-07-27 06:45:19]     "pilotErrorDiag": "",
[2025-07-27 06:45:19]  *** Listing of results directory ***
[2025-07-27 06:45:19] total 351732
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc    530466 Jul 26 18:28 pilot3.tar.gz
[2025-07-27 06:45:19] -rwx------. 1 boinc boinc     36292 Jul 26 18:55 runpilot2-wrapper.sh
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc      5112 Jul 26 18:55 queuedata.json
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc       100 Jul 27 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:45:19] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 05:41 run_atlas
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc       105 Jul 27 05:41 job.xml
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc      9627 Jul 27 05:41 init_data.xml
[2025-07-27 06:45:19] -rw-r--r--. 2 boinc boinc 149232293 Jul 27 05:41 EVNT.45743347._002046.pool.root.1
[2025-07-27 06:45:19] -rw-r--r--. 2 boinc boinc     15095 Jul 27 05:41 start_atlas.sh
[2025-07-27 06:45:19] drwxrwx--x. 2 boinc boinc        68 Jul 27 05:41 shared
[2025-07-27 06:45:19] -rw-r--r--. 2 boinc boinc    542891 Jul 27 05:41 input.tar.gz
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc         0 Jul 27 05:41 boinc_lockfile
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc      2563 Jul 27 05:41 pandaJob.out
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc    980125 Jul 27 05:41 agis_schedconf.cvmfs.json
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc   1593052 Jul 27 05:41 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:45:19] drwx------. 4 boinc boinc      4096 Jul 27 05:41 pilot3
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc        95 Jul 27 06:44 pilot_heartbeat.json
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc 205777922 Jul 27 06:44 HITS.45743349._035922.pool.root.1
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc       529 Jul 27 06:44 boinc_task_state.xml
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc      1028 Jul 27 06:44 memory_monitor_summary.json
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc    261634 Jul 27 06:44 log.45743349._035922.job.log.tgz.1
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc      7794 Jul 27 06:44 heartbeat.json
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc      8192 Jul 27 06:45 boinc_mmap_file
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc        27 Jul 27 06:45 wrapper_checkpoint.txt
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc      4739 Jul 27 06:45 pilotlog.txt
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc    385491 Jul 27 06:45 log.45743349._035922.job.log.1
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc       357 Jul 27 06:45 output.list
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc       620 Jul 27 06:45 runtime_log
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc    665600 Jul 27 06:45 result.tar.gz
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc      8618 Jul 27 06:45 runtime_log.err
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc       641 Jul 27 06:45 pvaLDm2nqz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSnRLDmDTaI8m.diag
[2025-07-27 06:45:19] -rw-r--r--. 1 boinc boinc     21317 Jul 27 06:45 stderr.txt
[2025-07-27 06:45:19] HITS file was successfully produced:
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc 205777922 Jul 27 06:44 shared/HITS.pool.root.1
[2025-07-27 06:45:19]  *** Contents of shared directory: ***
[2025-07-27 06:45:19] total 347892
[2025-07-27 06:45:19] -rw-r--r--. 2 boinc boinc 149232293 Jul 27 05:41 ATLAS.root_0
[2025-07-27 06:45:19] -rw-r--r--. 2 boinc boinc     15095 Jul 27 05:41 start_atlas.sh
[2025-07-27 06:45:19] -rw-r--r--. 2 boinc boinc    542891 Jul 27 05:41 input.tar.gz
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc 205777922 Jul 27 06:44 HITS.pool.root.1
[2025-07-27 06:45:19] -rw-------. 1 boinc boinc    665600 Jul 27 06:45 result.tar.gz
06:45:20 (1749633): run_atlas exited; CPU time 18245.625127
06:45:20 (1749633): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN