Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:09:59 (8600): wrapper (7.7.26015): starting
04:09:59 (8600): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 04:09:59] Arguments: --nthreads 8
[2025-07-27 04:09:59] Threads: 8
[2025-07-27 04:09:59] Checking for CVMFS
[2025-07-27 04:09:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 04:10:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 04:10:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 04:10:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 04:10:01] 2.11.2.0 16797 108943 141788 148796 0 109 22232015 25165825 4362 130560 0 65250823 99.846 51983592 3725 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 04:10:01] CVMFS is ok
[2025-07-27 04:10:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 04:10:01] Checking for apptainer binary...
[2025-07-27 04:10:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 04:10:01] Running /usr/bin/apptainer --version
[2025-07-27 04:10:01] apptainer version 1.3.2-1.el7
[2025-07-27 04:10:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 04:10:02] cg-vwn223.simple-grid.lan
[2025-07-27 04:10:02] apptainer works
[2025-07-27 04:10:02] Set ATHENA_PROC_NUMBER=8
[2025-07-27 04:10:02] Set ATHENA_CORE_NUMBER=8
[2025-07-27 04:10:02] Starting ATLAS job with PandaID=6745103359
[2025-07-27 04:10:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 08:35:41]  *** The last 200 lines of the pilot log: ***
[2025-07-27 08:35:41] 2025-07-27 06:32:04,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 08:35:41] 2025-07-27 06:32:04,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 08:35:41] 2025-07-27 06:32:04,626 | INFO     | fitting pss+swap vs Time
[2025-07-27 08:35:41] 2025-07-27 06:32:04,627 | INFO     | sum of square deviations: 5141528960.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,635 | INFO     | sum of deviations: 26863232216.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,636 | INFO     | mean x: 1753590045.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,636 | INFO     | mean y: 2480797.6666666665
[2025-07-27 08:35:41] 2025-07-27 06:32:04,636 | INFO     | -- intersect: -9159598606.530813
[2025-07-27 08:35:41] 2025-07-27 06:32:04,636 | INFO     | intersect: -9159598606.530813
[2025-07-27 08:35:41] 2025-07-27 06:32:04,636 | INFO     | chi2: 2.479967537839043
[2025-07-27 08:35:41] 2025-07-27 06:32:04,637 | INFO     | sum of square deviations: 4844974562.5
[2025-07-27 08:35:41] 2025-07-27 06:32:04,639 | INFO     | sum of deviations: 43150235998.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,639 | INFO     | mean x: 1753589892.5
[2025-07-27 08:35:41] 2025-07-27 06:32:04,640 | INFO     | mean y: 2489034.68
[2025-07-27 08:35:41] 2025-07-27 06:32:04,640 | INFO     | -- intersect: -15615305595.399124
[2025-07-27 08:35:41] 2025-07-27 06:32:04,640 | INFO     | intersect: -15615305595.399124
[2025-07-27 08:35:41] 2025-07-27 06:32:04,640 | INFO     | chi2: 1.7074995545096068
[2025-07-27 08:35:41] 2025-07-27 06:32:04,640 | INFO     | current chi2=1.7074995545096068 (change=31.14831027193758 %)
[2025-07-27 08:35:41] 2025-07-27 06:32:04,641 | INFO     | sum of square deviations: 4560048290.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,643 | INFO     | sum of deviations: 42224494203.000015
[2025-07-27 08:35:41] 2025-07-27 06:32:04,643 | INFO     | mean x: 1753589740.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,643 | INFO     | mean y: 2488539.151020408
[2025-07-27 08:35:41] 2025-07-27 06:32:04,643 | INFO     | -- intersect: -16235155253.667303
[2025-07-27 08:35:41] 2025-07-27 06:32:04,643 | INFO     | intersect: -16235155253.667303
[2025-07-27 08:35:41] 2025-07-27 06:32:04,644 | INFO     | chi2: 1.7082087093317777
[2025-07-27 08:35:41] 2025-07-27 06:32:04,644 | INFO     | current chi2=1.7082087093317777 (change=-0.04153177201704167 %)
[2025-07-27 08:35:41] 2025-07-27 06:32:04,644 | INFO     | right removable region: 244
[2025-07-27 08:35:41] 2025-07-27 06:32:04,644 | INFO     | sum of square deviations: 4844974562.5
[2025-07-27 08:35:41] 2025-07-27 06:32:04,646 | INFO     | sum of deviations: -20643005272.499996
[2025-07-27 08:35:41] 2025-07-27 06:32:04,646 | INFO     | mean x: 1753590197.5
[2025-07-27 08:35:41] 2025-07-27 06:32:04,647 | INFO     | mean y: 2505084.532
[2025-07-27 08:35:41] 2025-07-27 06:32:04,647 | INFO     | -- intersect: 7474034857.459845
[2025-07-27 08:35:41] 2025-07-27 06:32:04,647 | INFO     | intersect: 7474034857.459845
[2025-07-27 08:35:41] 2025-07-27 06:32:04,647 | INFO     | chi2: 0.8272486378246579
[2025-07-27 08:35:41] 2025-07-27 06:32:04,647 | INFO     | current chi2=0.8272486378246579 (change=66.64276345546469 %)
[2025-07-27 08:35:41] 2025-07-27 06:32:04,648 | INFO     | sum of square deviations: 4560048290.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,650 | INFO     | sum of deviations: -23733600864.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,650 | INFO     | mean x: 1753590350.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,650 | INFO     | mean y: 2506717.6408163267
[2025-07-27 08:35:41] 2025-07-27 06:32:04,650 | INFO     | -- intersect: 9129386697.64692
[2025-07-27 08:35:41] 2025-07-27 06:32:04,650 | INFO     | intersect: 9129386697.64692
[2025-07-27 08:35:41] 2025-07-27 06:32:04,651 | INFO     | chi2: 0.8082381164926037
[2025-07-27 08:35:41] 2025-07-27 06:32:04,651 | INFO     | current chi2=0.8082381164926037 (change=2.2980420230179455 %)
[2025-07-27 08:35:41] 2025-07-27 06:32:04,651 | INFO     | left removable region: 20
[2025-07-27 08:35:41] 2025-07-27 06:32:04,651 | INFO     | sum of square deviations: 3485088600.0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,653 | INFO     | sum of deviations: -6170687684.499999
[2025-07-27 08:35:41] 2025-07-27 06:32:04,653 | INFO     | mean x: 1753590319.5
[2025-07-27 08:35:41] 2025-07-27 06:32:04,653 | INFO     | mean y: 2515374.3973214286
[2025-07-27 08:35:41] 2025-07-27 06:32:04,654 | INFO     | -- intersect: 3107417266.4746327
[2025-07-27 08:35:41] 2025-07-27 06:32:04,654 | INFO     | intersect: 3107417266.4746327
[2025-07-27 08:35:41] 2025-07-27 06:32:04,654 | INFO     | chi2: 0.016797411649797277
[2025-07-27 08:35:41] 2025-07-27 06:32:04,654 | INFO     | -- intersect: 3107417266.4746327
[2025-07-27 08:35:41] 2025-07-27 06:32:04,654 | INFO     | current memory leak: -1.77 B/s (using 224 data points, chi2=0.02)
[2025-07-27 08:35:41] 2025-07-27 06:32:04,655 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 08:35:41] 2025-07-27 06:32:04,655 | INFO     | ..............................
[2025-07-27 08:35:41] 2025-07-27 06:32:04,655 | INFO     | . Timing measurements:
[2025-07-27 08:35:41] 2025-07-27 06:32:04,655 | INFO     | . get job = 0 s
[2025-07-27 08:35:41] 2025-07-27 06:32:04,656 | INFO     | . initial setup = 2 s
[2025-07-27 08:35:41] 2025-07-27 06:32:04,656 | INFO     | . payload setup = 17 s
[2025-07-27 08:35:41] 2025-07-27 06:32:04,656 | INFO     | . stage-in = 0 s
[2025-07-27 08:35:41] 2025-07-27 06:32:04,656 | INFO     | . payload execution = 15559 s
[2025-07-27 08:35:41] 2025-07-27 06:32:04,656 | INFO     | . stage-out = 2 s
[2025-07-27 08:35:41] 2025-07-27 06:32:04,656 | INFO     | . log creation = 1 s
[2025-07-27 08:35:41] 2025-07-27 06:32:04,656 | INFO     | ..............................
[2025-07-27 08:35:41] 2025-07-27 06:32:04,779 | INFO     | 
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | job summary report
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | --------------------------------------------------
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | PanDA job id: 6745103359
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | task id: 45743349
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | errors: (none)
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | pilot state: finished 
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | transexitcode: 0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | exeerrorcode: 0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | exeerrordiag: 
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | exitcode: 0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,780 | INFO     | exitmsg: OK
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | cpuconsumptiontime: 60514 s
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | nevents: 400
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | neventsw: 0
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | pid: 19187
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | pgrp: 19187
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | corecount: 8
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | event service: False
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | sizes: {0: 2396647, 1: 2397503, 2: 2397503, 9: 2397793, 12: 2397821, 15580: 2428813, 15581: 2428940, 15584: 2437994, 15586: 2438050, 15672: 2438074}
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | --------------------------------------------------
[2025-07-27 08:35:41] 2025-07-27 06:32:04,781 | INFO     | 
[2025-07-27 08:35:41] 2025-07-27 06:32:04,782 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-27 08:35:41] 2025-07-27 06:32:05,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 08:35:41] 2025-07-27 06:32:05,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 08:35:41] 2025-07-27 06:32:05,031 | INFO     | job 6745103359 has completed (purged errors)
[2025-07-27 08:35:41] 2025-07-27 06:32:05,031 | INFO     | overall cleanup function is called
[2025-07-27 08:35:41] 2025-07-27 06:32:06,040 | INFO     | --- collectZombieJob: --- 10, [19187]
[2025-07-27 08:35:41] 2025-07-27 06:32:06,040 | INFO     | zombie collector waiting for pid 19187
[2025-07-27 08:35:41] 2025-07-27 06:32:06,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 08:35:41] 2025-07-27 06:32:06,040 | INFO     | collected zombie processes
[2025-07-27 08:35:41] 2025-07-27 06:32:06,041 | INFO     | will attempt to kill all subprocesses of pid=19187
[2025-07-27 08:35:41] 2025-07-27 06:32:06,142 | INFO     | process IDs to be killed: [19187] (in reverse order)
[2025-07-27 08:35:41] 2025-07-27 06:32:06,798 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 08:35:41] 2025-07-27 06:32:06,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 08:35:41] 2025-07-27 06:32:06,802 | INFO     | did not find any defunct processes belonging to 19187
[2025-07-27 08:35:41] 2025-07-27 06:32:06,805 | INFO     | did not find any defunct processes belonging to 19187
[2025-07-27 08:35:41] 2025-07-27 06:32:06,805 | INFO     | ready for new job
[2025-07-27 08:35:41] 2025-07-27 06:32:06,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 08:35:41] 2025-07-27 06:32:06,811 | INFO     | ***************************************
[2025-07-27 08:35:41] 2025-07-27 06:32:06,811 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 08:35:41] 2025-07-27 06:32:06,811 | INFO     | ***************************************
[2025-07-27 08:35:41] 2025-07-27 06:32:06,812 | INFO     | 
[2025-07-27 08:35:41] 2025-07-27 06:32:06,812 | INFO     | pilot is running in a VM
[2025-07-27 08:35:41] 2025-07-27 06:32:06,812 | INFO     | architecture information:
[2025-07-27 08:35:41] 2025-07-27 06:32:06,830 | INFO     | executing command: cat /etc/os-release
[2025-07-27 08:35:41] 2025-07-27 06:32:07,175 | INFO     | cat /etc/os-release:
[2025-07-27 08:35:41] NAME="CentOS Linux"
[2025-07-27 08:35:41] VERSION="7 (Core)"
[2025-07-27 08:35:41] ID="centos"
[2025-07-27 08:35:41] ID_LIKE="rhel fedora"
[2025-07-27 08:35:41] VERSION_ID="7"
[2025-07-27 08:35:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 08:35:41] ANSI_COLOR="0;31"
[2025-07-27 08:35:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 08:35:41] HOME_URL="https://www.centos.org/"
[2025-07-27 08:35:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 08:35:41] 
[2025-07-27 08:35:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 08:35:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 08:35:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 08:35:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 08:35:41] 
[2025-07-27 08:35:41] 2025-07-27 06:32:07,175 | INFO     | ***************************************
[2025-07-27 08:35:41] 2025-07-27 06:32:07,679 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-27 08:35:41] 2025-07-27 06:32:07,947 | INFO     | sufficient remaining disk space (496572039168 B)
[2025-07-27 08:35:41] 2025-07-27 06:32:07,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 08:35:41] 2025-07-27 06:32:07,947 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 08:35:41] 2025-07-27 06:32:07,947 | INFO     | update_server=False
[2025-07-27 08:35:41] 2025-07-27 06:32:07,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 08:35:41] 2025-07-27 06:32:07,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 08:35:41] 2025-07-27 06:32:07,952 | INFO     | all data control threads have been joined
[2025-07-27 08:35:41] 2025-07-27 06:32:08,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:35:41] 2025-07-27 06:32:08,435 | INFO     | aborting loop
[2025-07-27 08:35:41] 2025-07-27 06:32:08,722 | INFO     | all payload control threads have been joined
[2025-07-27 08:35:41] 2025-07-27 06:32:08,953 | INFO     | [job] retrieve thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:08,958 | INFO     | [data] control thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:09,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:09,439 | INFO     | [payload] validate_post thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:09,440 | INFO     | [job] job monitor thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:09,473 | INFO     | all job control threads have been joined
[2025-07-27 08:35:41] 2025-07-27 06:32:09,497 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:09,710 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:09,727 | INFO     | [payload] control thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:09,793 | INFO     | [job] validate thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:09,799 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:35:41] 2025-07-27 06:32:09,956 | INFO     | [data] copytool_out thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:10,083 | INFO     | [payload] failed_post thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:10,114 | INFO     | [data] copytool_in thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:10,250 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:10,479 | INFO     | [job] control thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:10,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 08:35:41] 2025-07-27 06:32:10,805 | INFO     | [job] queue monitor thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:14,520 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 08:35:41] 2025-07-27 06:32:14,879 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761484666688)>', '<ExcThread(monitor, started 139760920164096)>']
[2025-07-27 08:35:41] 2025-07-27 06:32:19,905 | INFO     | all workflow threads have been joined
[2025-07-27 08:35:41] 2025-07-27 06:32:19,905 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 08:35:41] 2025-07-27 06:32:19,906 | INFO     | traces error code: 0
[2025-07-27 08:35:41] 2025-07-27 06:32:19,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 08:35:41] 2025-07-27 06:32:37,176 | INFO     | PID=12620 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 08:35:41] 2025-07-27 06:32:37,176 | INFO     | .. there are 9 such processes running
[2025-07-27 08:35:41] 2025-07-27 06:32:37,176 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 08:35:41] 2025-07-27 06:32:37,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 08:35:41] 2025-07-27 06:32:37,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 08:35:41] 2025-07-27 06:32:37,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 08:35:41] 2025-07-27 06:32:37,177 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 08:35:41] 2025-07-27 06:32:37,177 | INFO     | [monitor] control thread has ended
[2025-07-27 08:35:41] 2025-07-27 06:32:37,503 [wrapper] ==== pilot stdout END ====
[2025-07-27 08:35:41] 2025-07-27 06:32:37,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 08:35:41] 2025-07-27 06:32:37,656 [wrapper] pilotpid: 12620
[2025-07-27 08:35:41] 2025-07-27 06:32:37,746 [wrapper] Pilot exit status: 0
[2025-07-27 08:35:41] 2025-07-27 06:32:38,274 [wrapper] pandaids: 6745103359
[2025-07-27 08:35:41] 2025-07-27 06:32:39,022 [wrapper] cleanup supervisor_pilot  4175 12621
[2025-07-27 08:35:41] 2025-07-27 06:32:39,132 [wrapper] Test setup, not cleaning
[2025-07-27 08:35:41] 2025-07-27 06:32:39,222 [wrapper] apfmon messages muted
[2025-07-27 08:35:41] 2025-07-27 06:32:39,303 [wrapper] ==== wrapper stdout END ====
[2025-07-27 08:35:41] 2025-07-27 06:32:39,392 [wrapper] ==== wrapper stderr END ====
[2025-07-27 08:35:41]  *** Error codes and diagnostics ***
[2025-07-27 08:35:41]     "exeErrorCode": 0,
[2025-07-27 08:35:41]     "exeErrorDiag": "",
[2025-07-27 08:35:41]     "pilotErrorCode": 0,
[2025-07-27 08:35:41]     "pilotErrorDiag": "",
[2025-07-27 08:35:41]  *** Listing of results directory ***
[2025-07-27 08:35:41] total 353880
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc    530466 Jul 26 11:28 pilot3.tar.gz
[2025-07-27 08:35:41] -rwx------. 1 boinc boinc     36292 Jul 26 11:55 runpilot2-wrapper.sh
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc      5112 Jul 26 11:55 queuedata.json
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc       100 Jul 27 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 08:35:41] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 04:09 run_atlas
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc       105 Jul 27 04:09 job.xml
[2025-07-27 08:35:41] -rw-r--r--. 2 boinc boinc 149232293 Jul 27 04:09 EVNT.45743347._002046.pool.root.1
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc      6392 Jul 27 04:09 init_data.xml
[2025-07-27 08:35:41] -rw-r--r--. 2 boinc boinc     15095 Jul 27 04:09 start_atlas.sh
[2025-07-27 08:35:41] drwxrwx--x. 2 boinc boinc        68 Jul 27 04:09 shared
[2025-07-27 08:35:41] -rw-r--r--. 2 boinc boinc    542884 Jul 27 04:09 input.tar.gz
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc         0 Jul 27 04:09 boinc_lockfile
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc      2563 Jul 27 04:10 pandaJob.out
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc    980125 Jul 27 04:10 agis_schedconf.cvmfs.json
[2025-07-27 08:35:41] drwx------. 4 boinc boinc      4096 Jul 27 04:10 pilot3
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc 205777045 Jul 27 08:29 HITS.45743349._035925.pool.root.1
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc       531 Jul 27 08:29 boinc_task_state.xml
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc      1028 Jul 27 08:30 memory_monitor_summary.json
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc   1593052 Jul 27 08:30 agis_ddmendpoints.agis.ALL.json
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc    400373 Jul 27 08:30 log.45743349._035925.job.log.tgz.1
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc        95 Jul 27 08:31 pilot_heartbeat.json
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc      7776 Jul 27 08:32 heartbeat.json
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc       890 Jul 27 08:32 pilotlog.txt
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc   1351203 Jul 27 08:32 log.45743349._035925.job.log.1
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc       357 Jul 27 08:32 output.list
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc       620 Jul 27 08:32 runtime_log
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc   1771520 Jul 27 08:32 result.tar.gz
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc      8660 Jul 27 08:32 runtime_log.err
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc       657 Jul 27 08:32 5xhLDm2nqz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVnRLDmP5ftzm.diag
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc      8192 Jul 27 08:35 boinc_mmap_file
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc        28 Jul 27 08:35 wrapper_checkpoint.txt
[2025-07-27 08:35:41] -rw-r--r--. 1 boinc boinc     20581 Jul 27 08:35 stderr.txt
[2025-07-27 08:35:41] HITS file was successfully produced:
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc 205777045 Jul 27 08:29 shared/HITS.pool.root.1
[2025-07-27 08:35:41]  *** Contents of shared directory: ***
[2025-07-27 08:35:41] total 348972
[2025-07-27 08:35:41] -rw-r--r--. 2 boinc boinc 149232293 Jul 27 04:09 ATLAS.root_0
[2025-07-27 08:35:41] -rw-r--r--. 2 boinc boinc     15095 Jul 27 04:09 start_atlas.sh
[2025-07-27 08:35:41] -rw-r--r--. 2 boinc boinc    542884 Jul 27 04:09 input.tar.gz
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc 205777045 Jul 27 08:29 HITS.pool.root.1
[2025-07-27 08:35:41] -rw-------. 1 boinc boinc   1771520 Jul 27 08:32 result.tar.gz
08:35:43 (8600): run_atlas exited; CPU time 60720.483844
08:35:43 (8600): called boinc_finish(0)

</stderr_txt>
]]>

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