Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:06 (3009089): wrapper (7.7.26015): starting
11:38:06 (3009089): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 11:38:06] Arguments: --nthreads 8
[2025-07-26 11:38:06] Threads: 8
[2025-07-26 11:38:06] Checking for CVMFS
[2025-07-26 11:38:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:38:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:38:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:38:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:38:06] 2.12.6.0 126724 12911 361784 148782 2 65 21842223 32935936 16974 16776704 2 41034141 99.656 69732399 11496 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 11:38:06] CVMFS is ok
[2025-07-26 11:38:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:38:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:38:06] Further information can be found at the LHC@home message board.
[2025-07-26 11:38:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:38:06] Checking for apptainer binary...
[2025-07-26 11:38:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:38:06] Running /usr/bin/apptainer --version
[2025-07-26 11:38:06] apptainer version 1.4.1-1.el9
[2025-07-26 11:38:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:38:06] c6-12-27-3.aglt2.org
[2025-07-26 11:38:06] apptainer works
[2025-07-26 11:38:06] Set ATHENA_PROC_NUMBER=8
[2025-07-26 11:38:06] Set ATHENA_CORE_NUMBER=8
[2025-07-26 11:38:06] Starting ATLAS job with PandaID=6745098933
[2025-07-26 11:38:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:40:39]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:40:39] 2025-07-26 17:40:01,265 | INFO     | monitor loop #500: job 0:6745098933 is in state 'finished'
[2025-07-26 13:40:39] 2025-07-26 17:40:01,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:40:39] 2025-07-26 17:40:03,770 | INFO     | monitor loop #501: job 0:6745098933 is in state 'finished'
[2025-07-26 13:40:39] 2025-07-26 17:40:03,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:40:39] 2025-07-26 17:40:04,505 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 13:40:39] 2025-07-26 17:40:04,553 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2609.3282812499997
[2025-07-26 13:40:39] 2025-07-26 17:40:04,574 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745098933/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:40:39] 2025-07-26 17:40:04,576 | INFO     | extracted standard info from prmon json
[2025-07-26 13:40:39] 2025-07-26 17:40:04,576 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 13:40:39] 2025-07-26 17:40:04,576 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:40:39] 2025-07-26 17:40:04,577 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:40:39] 2025-07-26 17:40:04,577 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:40:39] 2025-07-26 17:40:04,580 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:40:39] 2025-07-26 17:40:04,581 | INFO     | sum of square deviations: 522509652.9915964
[2025-07-26 13:40:39] 2025-07-26 17:40:04,581 | INFO     | sum of deviations: 2996612703.142855
[2025-07-26 13:40:39] 2025-07-26 17:40:04,581 | INFO     | mean x: 1753547938.0084033
[2025-07-26 13:40:39] 2025-07-26 17:40:04,582 | INFO     | mean y: 2206764.8571428573
[2025-07-26 13:40:39] 2025-07-26 17:40:04,582 | INFO     | -- intersect: -10054457253.731722
[2025-07-26 13:40:39] 2025-07-26 17:40:04,582 | INFO     | intersect: -10054457253.731722
[2025-07-26 13:40:39] 2025-07-26 17:40:04,582 | INFO     | chi2: 1.7231169162880768
[2025-07-26 13:40:39] 2025-07-26 17:40:04,582 | INFO     | sum of square deviations: 459366752.5
[2025-07-26 13:40:39] 2025-07-26 17:40:04,583 | INFO     | sum of deviations: 3015573002.9999986
[2025-07-26 13:40:39] 2025-07-26 17:40:04,583 | INFO     | mean x: 1753547785.5
[2025-07-26 13:40:39] 2025-07-26 17:40:04,583 | INFO     | mean y: 2206783.947368421
[2025-07-26 13:40:39] 2025-07-26 17:40:04,583 | INFO     | -- intersect: -11509186525.746353
[2025-07-26 13:40:39] 2025-07-26 17:40:04,583 | INFO     | intersect: -11509186525.746353
[2025-07-26 13:40:39] 2025-07-26 17:40:04,584 | INFO     | chi2: 1.7242557253288113
[2025-07-26 13:40:39] 2025-07-26 17:40:04,584 | INFO     | current chi2=1.7242557253288113 (change=-0.06609006214086169 %)
[2025-07-26 13:40:39] 2025-07-26 17:40:04,584 | INFO     | right removable region: 113
[2025-07-26 13:40:39] 2025-07-26 17:40:04,584 | INFO     | sum of square deviations: 459373280.4912284
[2025-07-26 13:40:39] 2025-07-26 17:40:04,585 | INFO     | sum of deviations: -14174544396.105263
[2025-07-26 13:40:39] 2025-07-26 17:40:04,585 | INFO     | mean x: 1753548090.508772
[2025-07-26 13:40:39] 2025-07-26 17:40:04,585 | INFO     | mean y: 2247584.6052631577
[2025-07-26 13:40:39] 2025-07-26 17:40:04,585 | INFO     | -- intersect: 54110194901.52983
[2025-07-26 13:40:39] 2025-07-26 17:40:04,585 | INFO     | intersect: 54110194901.52983
[2025-07-26 13:40:39] 2025-07-26 17:40:04,586 | INFO     | chi2: 0.1657993278641955
[2025-07-26 13:40:39] 2025-07-26 17:40:04,586 | INFO     | current chi2=0.1657993278641955 (change=90.37794091062847 %)
[2025-07-26 13:40:39] 2025-07-26 17:40:04,586 | INFO     | sum of square deviations: 401539332.990825
[2025-07-26 13:40:39] 2025-07-26 17:40:04,587 | INFO     | sum of deviations: -13298149465.385323
[2025-07-26 13:40:39] 2025-07-26 17:40:04,587 | INFO     | mean x: 1753548243.0091743
[2025-07-26 13:40:39] 2025-07-26 17:40:04,587 | INFO     | mean y: 2245052.3853211007
[2025-07-26 13:40:39] 2025-07-26 17:40:04,587 | INFO     | -- intersect: 58076124033.582535
[2025-07-26 13:40:39] 2025-07-26 17:40:04,587 | INFO     | intersect: 58076124033.582535
[2025-07-26 13:40:39] 2025-07-26 17:40:04,588 | INFO     | chi2: 0.12553702450549245
[2025-07-26 13:40:39] 2025-07-26 17:40:04,588 | INFO     | current chi2=0.12553702450549245 (change=24.283755475583998 %)
[2025-07-26 13:40:39] 2025-07-26 17:40:04,588 | INFO     | left removable region: 20
[2025-07-26 13:40:39] 2025-07-26 17:40:04,588 | INFO     | sum of square deviations: 249388862.0
[2025-07-26 13:40:39] 2025-07-26 17:40:04,589 | INFO     | sum of deviations: -8086712233.000001
[2025-07-26 13:40:39] 2025-07-26 17:40:04,589 | INFO     | mean x: 1753548365.0
[2025-07-26 13:40:39] 2025-07-26 17:40:04,589 | INFO     | mean y: 2231980.204301075
[2025-07-26 13:40:39] 2025-07-26 17:40:04,589 | INFO     | -- intersect: 56862995130.09449
[2025-07-26 13:40:39] 2025-07-26 17:40:04,589 | INFO     | intersect: 56862995130.09449
[2025-07-26 13:40:39] 2025-07-26 17:40:04,589 | INFO     | chi2: 0.10377939225635774
[2025-07-26 13:40:39] 2025-07-26 17:40:04,589 | INFO     | -- intersect: 56862995130.09449
[2025-07-26 13:40:39] 2025-07-26 17:40:04,589 | INFO     | current memory leak: -32.43 B/s (using 93 data points, chi2=0.10)
[2025-07-26 13:40:39] 2025-07-26 17:40:04,590 | INFO     | could have reported an average CPU frequency of 2582 MHz (8 samples)
[2025-07-26 13:40:39] 2025-07-26 17:40:04,590 | INFO     | ..............................
[2025-07-26 13:40:39] 2025-07-26 17:40:04,590 | INFO     | . Timing measurements:
[2025-07-26 13:40:39] 2025-07-26 17:40:04,590 | INFO     | . get job = 0 s
[2025-07-26 13:40:39] 2025-07-26 17:40:04,590 | INFO     | . initial setup = 4 s
[2025-07-26 13:40:39] 2025-07-26 17:40:04,590 | INFO     | . payload setup = 10 s
[2025-07-26 13:40:39] 2025-07-26 17:40:04,591 | INFO     | . stage-in = 0 s
[2025-07-26 13:40:39] 2025-07-26 17:40:04,591 | INFO     | . payload execution = 7252 s
[2025-07-26 13:40:39] 2025-07-26 17:40:04,591 | INFO     | . stage-out = 2 s
[2025-07-26 13:40:39] 2025-07-26 17:40:04,591 | INFO     | . log creation = 0 s
[2025-07-26 13:40:39] 2025-07-26 17:40:04,591 | INFO     | ..............................
[2025-07-26 13:40:39] 2025-07-26 17:40:05,336 | INFO     | 
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | job summary report
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | --------------------------------------------------
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | PanDA job id: 6745098933
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | task id: 45743349
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | errors: (none)
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | pilot state: finished 
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | transexitcode: 0
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | exeerrorcode: 0
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | exeerrordiag: 
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | exitcode: 0
[2025-07-26 13:40:39] 2025-07-26 17:40:05,337 | INFO     | exitmsg: OK
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | cpuconsumptiontime: 50643 s
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | nevents: 400
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | neventsw: 0
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | pid: 3019958
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | pgrp: 3019958
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | corecount: 8
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | event service: False
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | sizes: {0: 2396646, 1: 2397502, 8: 2397764, 12: 2397792, 7266: 2425068, 7267: 2425067, 7269: 2434249, 7271: 2434305, 7284: 2434499}
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | --------------------------------------------------
[2025-07-26 13:40:39] 2025-07-26 17:40:05,338 | INFO     | 
[2025-07-26 13:40:39] 2025-07-26 17:40:05,339 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 13:40:39] 2025-07-26 17:40:05,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:40:39] 2025-07-26 17:40:05,429 | INFO     | job 6745098933 has completed (purged errors)
[2025-07-26 13:40:39] 2025-07-26 17:40:05,430 | INFO     | overall cleanup function is called
[2025-07-26 13:40:39] 2025-07-26 17:40:06,445 | INFO     | --- collectZombieJob: --- 10, [3019958]
[2025-07-26 13:40:39] 2025-07-26 17:40:06,445 | INFO     | zombie collector waiting for pid 3019958
[2025-07-26 13:40:39] 2025-07-26 17:40:06,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:40:39] 2025-07-26 17:40:06,445 | INFO     | collected zombie processes
[2025-07-26 13:40:39] 2025-07-26 17:40:06,446 | INFO     | will attempt to kill all subprocesses of pid=3019958
[2025-07-26 13:40:39] 2025-07-26 17:40:07,303 | INFO     | process IDs to be killed: [3019958] (in reverse order)
[2025-07-26 13:40:39] 2025-07-26 17:40:07,489 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:40:39] 2025-07-26 17:40:07,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:40:39] 2025-07-26 17:40:07,513 | INFO     | did not find any defunct processes belonging to 3019958
[2025-07-26 13:40:39] 2025-07-26 17:40:07,533 | INFO     | did not find any defunct processes belonging to 3019958
[2025-07-26 13:40:39] 2025-07-26 17:40:07,533 | INFO     | ready for new job
[2025-07-26 13:40:39] 2025-07-26 17:40:07,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:40:39] 2025-07-26 17:40:07,536 | INFO     | ***************************************
[2025-07-26 13:40:39] 2025-07-26 17:40:07,536 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:40:39] 2025-07-26 17:40:07,536 | INFO     | ***************************************
[2025-07-26 13:40:39] 2025-07-26 17:40:07,536 | INFO     | 
[2025-07-26 13:40:39] 2025-07-26 17:40:07,559 | INFO     | architecture information:
[2025-07-26 13:40:39] 2025-07-26 17:40:07,562 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:40:39] 2025-07-26 17:40:07,605 | INFO     | cat /etc/os-release:
[2025-07-26 13:40:39] NAME="CentOS Linux"
[2025-07-26 13:40:39] VERSION="7 (Core)"
[2025-07-26 13:40:39] ID="centos"
[2025-07-26 13:40:39] ID_LIKE="rhel fedora"
[2025-07-26 13:40:39] VERSION_ID="7"
[2025-07-26 13:40:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:40:39] ANSI_COLOR="0;31"
[2025-07-26 13:40:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:40:39] HOME_URL="https://www.centos.org/"
[2025-07-26 13:40:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:40:39] 
[2025-07-26 13:40:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:40:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:40:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:40:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:40:39] 
[2025-07-26 13:40:39] 2025-07-26 17:40:07,606 | INFO     | ***************************************
[2025-07-26 13:40:39] 2025-07-26 17:40:08,111 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 13:40:39] 2025-07-26 17:40:08,154 | INFO     | sufficient remaining disk space (95835652096 B)
[2025-07-26 13:40:39] 2025-07-26 17:40:08,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:40:39] 2025-07-26 17:40:08,154 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:40:39] 2025-07-26 17:40:08,155 | INFO     | update_server=False
[2025-07-26 13:40:39] 2025-07-26 17:40:08,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:40:39] 2025-07-26 17:40:08,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:40:39] 2025-07-26 17:40:08,156 | INFO     | aborting loop
[2025-07-26 13:40:39] 2025-07-26 17:40:08,281 | INFO     | all payload control threads have been joined
[2025-07-26 13:40:39] 2025-07-26 17:40:08,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:40:39] 2025-07-26 17:40:08,938 | INFO     | all data control threads have been joined
[2025-07-26 13:40:39] 2025-07-26 17:40:09,135 | INFO     | all job control threads have been joined
[2025-07-26 13:40:39] 2025-07-26 17:40:09,161 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:09,166 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:09,287 | INFO     | [payload] control thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:09,475 | INFO     | [job] validate thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:09,594 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:09,819 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:09,823 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:09,836 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:09,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:40:39] 2025-07-26 17:40:09,944 | INFO     | [data] control thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:10,141 | INFO     | [job] control thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:10,390 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:10,550 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:10,637 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:10,654 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:10,891 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:11,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:40:39] 2025-07-26 17:40:15,624 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:40:39] 2025-07-26 17:40:17,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365847111488)>', '<ExcThread(monitor, started 140365210306304)>']
[2025-07-26 13:40:39] 2025-07-26 17:40:22,393 | INFO     | all workflow threads have been joined
[2025-07-26 13:40:39] 2025-07-26 17:40:22,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:40:39] 2025-07-26 17:40:22,397 | INFO     | traces error code: 0
[2025-07-26 13:40:39] 2025-07-26 17:40:22,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:40:39] 2025-07-26 17:40:38,281 | INFO     | PID=3012801 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 13:40:39] 2025-07-26 17:40:38,281 | INFO     | .. there are 34 such processes running
[2025-07-26 13:40:39] 2025-07-26 17:40:38,284 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:40:39] 2025-07-26 17:40:38,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:40:39] 2025-07-26 17:40:38,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:40:39] 2025-07-26 17:40:38,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:40:39] 2025-07-26 17:40:38,285 | INFO     | [monitor] control thread has ended
[2025-07-26 13:40:39] 2025-07-26 17:40:38,662 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:40:39] 2025-07-26 17:40:38,669 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:40:39] 2025-07-26 17:40:38,674 [wrapper] pilotpid: 3012801
[2025-07-26 13:40:39] 2025-07-26 17:40:38,678 [wrapper] Pilot exit status: 0
[2025-07-26 13:40:39] 2025-07-26 17:40:38,730 [wrapper] pandaids: 6745098933
[2025-07-26 13:40:39] 2025-07-26 17:40:38,830 [wrapper] cleanup supervisor_pilot 3803017 3012802
[2025-07-26 13:40:39] 2025-07-26 17:40:38,838 [wrapper] Test setup, not cleaning
[2025-07-26 13:40:39] 2025-07-26 17:40:38,841 [wrapper] apfmon messages muted
[2025-07-26 13:40:39] 2025-07-26 17:40:38,846 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:40:39] 2025-07-26 17:40:38,850 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:40:39]  *** Error codes and diagnostics ***
[2025-07-26 13:40:39]     "exeErrorCode": 0,
[2025-07-26 13:40:39]     "exeErrorDiag": "",
[2025-07-26 13:40:39]     "pilotErrorCode": 0,
[2025-07-26 13:40:39]     "pilotErrorDiag": "",
[2025-07-26 13:40:39]  *** Listing of results directory ***
[2025-07-26 13:40:39] total 365172
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 02:56 pilot3.tar.gz
[2025-07-26 13:40:39] -rwx------. 1 boincer umatlas     36292 Jul 26 03:00 runpilot2-wrapper.sh
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 03:00 queuedata.json
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:40:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:38 run_atlas
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:38 job.xml
[2025-07-26 13:40:39] -rw-r--r--. 2 boincer umatlas 150818668 Jul 26 11:38 EVNT.45743347._001914.pool.root.1
[2025-07-26 13:40:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:38 start_atlas.sh
[2025-07-26 13:40:39] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:38 shared
[2025-07-26 13:40:39] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 11:38 input.tar.gz
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:38 boinc_lockfile
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 11:38 pandaJob.out
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas    980133 Jul 26 11:38 agis_schedconf.cvmfs.json
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:38 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:40:39] drwx------. 4 boincer umatlas      4096 Jul 26 11:38 pilot3
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas      6856 Jul 26 13:36 init_data.xml
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas 217259609 Jul 26 13:39 HITS.45743349._033893.pool.root.1
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas       529 Jul 26 13:39 boinc_task_state.xml
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas      1042 Jul 26 13:39 memory_monitor_summary.json
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas    325847 Jul 26 13:39 log.45743349._033893.job.log.tgz.1
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas      7829 Jul 26 13:40 heartbeat.json
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas        27 Jul 26 13:40 wrapper_checkpoint.txt
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 13:40 boinc_mmap_file
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas        95 Jul 26 13:40 pilot_heartbeat.json
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas       823 Jul 26 13:40 pilotlog.txt
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas    667491 Jul 26 13:40 log.45743349._033893.job.log.1
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas       357 Jul 26 13:40 output.list
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas       620 Jul 26 13:40 runtime_log
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas   1013760 Jul 26 13:40 result.tar.gz
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas       654 Jul 26 13:40 TXjKDmQ4nz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpK0KDmiBjNrn.diag
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas      8670 Jul 26 13:40 runtime_log.err
[2025-07-26 13:40:39] -rw-r--r--. 1 boincer umatlas     21244 Jul 26 13:40 stderr.txt
[2025-07-26 13:40:39] HITS file was successfully produced:
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas 217259609 Jul 26 13:39 shared/HITS.pool.root.1
[2025-07-26 13:40:39]  *** Contents of shared directory: ***
[2025-07-26 13:40:39] total 360996
[2025-07-26 13:40:39] -rw-r--r--. 2 boincer umatlas 150818668 Jul 26 11:38 ATLAS.root_0
[2025-07-26 13:40:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:38 start_atlas.sh
[2025-07-26 13:40:39] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 11:38 input.tar.gz
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas 217259609 Jul 26 13:39 HITS.pool.root.1
[2025-07-26 13:40:39] -rw-------. 1 boincer umatlas   1013760 Jul 26 13:40 result.tar.gz
13:40:41 (3009089): run_atlas exited; CPU time 50996.729606
13:40:41 (3009089): called boinc_finish(0)

</stderr_txt>
]]>

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