Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:16:15 (2623): wrapper (7.7.26015): starting
11:16:15 (2623): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 11:16:15] Arguments: --nthreads 8
[2025-07-26 11:16:15] Threads: 8
[2025-07-26 11:16:15] Checking for CVMFS
[2025-07-26 11:16:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:16:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:16:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:16:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:16:15] 2.11.2.0 2692 98008 113312 148780 1 59 14703422 20275200 1 130560 0 25835696 99.954 7821294 9007 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 11:16:15] CVMFS is ok
[2025-07-26 11:16:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:16:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:16:15] Further information can be found at the LHC@home message board.
[2025-07-26 11:16:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:16:15] Checking for apptainer binary...
[2025-07-26 11:16:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:16:15] Running /usr/bin/apptainer --version
[2025-07-26 11:16:15] apptainer version 1.3.2-1.el7
[2025-07-26 11:16:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:16:16] c-204-1.aglt2.org
[2025-07-26 11:16:16] apptainer works
[2025-07-26 11:16:16] Set ATHENA_PROC_NUMBER=8
[2025-07-26 11:16:16] Set ATHENA_CORE_NUMBER=8
[2025-07-26 11:16:16] Starting ATLAS job with PandaID=6745102969
[2025-07-26 11:16:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:45:48]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:45:48] 2025-07-26 17:45:11,268 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 13:45:48] 2025-07-26 17:45:13,038 | INFO     | monitor loop #668: job 0:6745102969 is in state 'finished'
[2025-07-26 13:45:48] 2025-07-26 17:45:13,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:45:48] 2025-07-26 17:45:15,544 | INFO     | monitor loop #669: job 0:6745102969 is in state 'finished'
[2025-07-26 13:45:48] 2025-07-26 17:45:15,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,003 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 13:45:48] 2025-07-26 17:45:17,007 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.375
[2025-07-26 13:45:48] 2025-07-26 17:45:17,010 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745102969/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,010 | INFO     | extracted standard info from prmon json
[2025-07-26 13:45:48] 2025-07-26 17:45:17,011 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 13:45:48] 2025-07-26 17:45:17,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:45:48] 2025-07-26 17:45:17,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:45:48] 2025-07-26 17:45:17,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:45:48] 2025-07-26 17:45:17,016 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:45:48] 2025-07-26 17:45:17,016 | INFO     | sum of square deviations: 964976232.5
[2025-07-26 13:45:48] 2025-07-26 17:45:17,017 | INFO     | sum of deviations: -10405145576.999992
[2025-07-26 13:45:48] 2025-07-26 17:45:17,017 | INFO     | mean x: 1753547448.5
[2025-07-26 13:45:48] 2025-07-26 17:45:17,018 | INFO     | mean y: 2564608.5890410957
[2025-07-26 13:45:48] 2025-07-26 17:45:17,018 | INFO     | -- intersect: 18910715776.777943
[2025-07-26 13:45:48] 2025-07-26 17:45:17,018 | INFO     | intersect: 18910715776.777943
[2025-07-26 13:45:48] 2025-07-26 17:45:17,018 | INFO     | chi2: 1.894983979727273
[2025-07-26 13:45:48] 2025-07-26 17:45:17,018 | INFO     | sum of square deviations: 869188390.0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,019 | INFO     | sum of deviations: -4397454986.000006
[2025-07-26 13:45:48] 2025-07-26 17:45:17,019 | INFO     | mean x: 1753547296.0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,019 | INFO     | mean y: 2573959.8723404254
[2025-07-26 13:45:48] 2025-07-26 17:45:17,020 | INFO     | -- intersect: 8874235602.7321
[2025-07-26 13:45:48] 2025-07-26 17:45:17,020 | INFO     | intersect: 8874235602.7321
[2025-07-26 13:45:48] 2025-07-26 17:45:17,020 | INFO     | chi2: 1.7144348027243748
[2025-07-26 13:45:48] 2025-07-26 17:45:17,020 | INFO     | current chi2=1.7144348027243748 (change=9.527741602801461 %)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,020 | INFO     | right removable region: 140
[2025-07-26 13:45:48] 2025-07-26 17:45:17,020 | INFO     | sum of square deviations: 869188390.0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,021 | INFO     | sum of deviations: -33789798076.000004
[2025-07-26 13:45:48] 2025-07-26 17:45:17,021 | INFO     | mean x: 1753547601.0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,021 | INFO     | mean y: 2601285.1063829786
[2025-07-26 13:45:48] 2025-07-26 17:45:17,022 | INFO     | -- intersect: 68171964838.66723
[2025-07-26 13:45:48] 2025-07-26 17:45:17,022 | INFO     | intersect: 68171964838.66723
[2025-07-26 13:45:48] 2025-07-26 17:45:17,022 | INFO     | chi2: 0.3415512500796539
[2025-07-26 13:45:48] 2025-07-26 17:45:17,022 | INFO     | current chi2=0.3415512500796539 (change=81.97603495683325 %)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,022 | INFO     | sum of square deviations: 779958810.0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,023 | INFO     | sum of deviations: -35716592083.0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,023 | INFO     | mean x: 1753547753.5
[2025-07-26 13:45:48] 2025-07-26 17:45:17,023 | INFO     | mean y: 2604486.867647059
[2025-07-26 13:45:48] 2025-07-26 17:45:17,023 | INFO     | -- intersect: 80302678037.95752
[2025-07-26 13:45:48] 2025-07-26 17:45:17,023 | INFO     | intersect: 80302678037.95752
[2025-07-26 13:45:48] 2025-07-26 17:45:17,024 | INFO     | chi2: 0.2829627038364858
[2025-07-26 13:45:48] 2025-07-26 17:45:17,024 | INFO     | current chi2=0.2829627038364858 (change=17.153661779748884 %)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,024 | INFO     | left removable region: 20
[2025-07-26 13:45:48] 2025-07-26 17:45:17,024 | INFO     | sum of square deviations: 535786790.0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,025 | INFO     | sum of deviations: -24379917823.999992
[2025-07-26 13:45:48] 2025-07-26 17:45:17,025 | INFO     | mean x: 1753547875.5
[2025-07-26 13:45:48] 2025-07-26 17:45:17,025 | INFO     | mean y: 2607204.2666666666
[2025-07-26 13:45:48] 2025-07-26 17:45:17,025 | INFO     | -- intersect: 79794333881.85005
[2025-07-26 13:45:48] 2025-07-26 17:45:17,025 | INFO     | intersect: 79794333881.85005
[2025-07-26 13:45:48] 2025-07-26 17:45:17,026 | INFO     | chi2: 0.09466065407442734
[2025-07-26 13:45:48] 2025-07-26 17:45:17,026 | INFO     | -- intersect: 79794333881.85005
[2025-07-26 13:45:48] 2025-07-26 17:45:17,026 | INFO     | current memory leak: -45.50 B/s (using 120 data points, chi2=0.09)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,026 | INFO     | could have reported an average CPU frequency of 1997 MHz (8 samples)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | ..............................
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | . Timing measurements:
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | . get job = 0 s
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | . initial setup = 2 s
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | . payload setup = 11 s
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | . stage-in = 0 s
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | . payload execution = 8882 s
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | . stage-out = 0 s
[2025-07-26 13:45:48] 2025-07-26 17:45:17,027 | INFO     | . log creation = 0 s
[2025-07-26 13:45:48] 2025-07-26 17:45:17,028 | INFO     | ..............................
[2025-07-26 13:45:48] 2025-07-26 17:45:17,128 | INFO     | 
[2025-07-26 13:45:48] 2025-07-26 17:45:17,128 | INFO     | job summary report
[2025-07-26 13:45:48] 2025-07-26 17:45:17,128 | INFO     | --------------------------------------------------
[2025-07-26 13:45:48] 2025-07-26 17:45:17,129 | INFO     | PanDA job id: 6745102969
[2025-07-26 13:45:48] 2025-07-26 17:45:17,129 | INFO     | task id: 45743349
[2025-07-26 13:45:48] 2025-07-26 17:45:17,129 | INFO     | errors: (none)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:45:48] 2025-07-26 17:45:17,129 | INFO     | pilot state: finished 
[2025-07-26 13:45:48] 2025-07-26 17:45:17,130 | INFO     | transexitcode: 0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,130 | INFO     | exeerrorcode: 0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,130 | INFO     | exeerrordiag: 
[2025-07-26 13:45:48] 2025-07-26 17:45:17,130 | INFO     | exitcode: 0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,130 | INFO     | exitmsg: OK
[2025-07-26 13:45:48] 2025-07-26 17:45:17,130 | INFO     | cpuconsumptiontime: 66595 s
[2025-07-26 13:45:48] 2025-07-26 17:45:17,131 | INFO     | nevents: 400
[2025-07-26 13:45:48] 2025-07-26 17:45:17,131 | INFO     | neventsw: 0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,131 | INFO     | pid: 12880
[2025-07-26 13:45:48] 2025-07-26 17:45:17,131 | INFO     | pgrp: 12880
[2025-07-26 13:45:48] 2025-07-26 17:45:17,131 | INFO     | corecount: 8
[2025-07-26 13:45:48] 2025-07-26 17:45:17,131 | INFO     | event service: False
[2025-07-26 13:45:48] 2025-07-26 17:45:17,132 | INFO     | sizes: {0: 2397304, 1: 2397503, 7: 2397765, 12: 2397793, 8897: 2426007, 8900: 2435005, 8902: 2435189, 8908: 2435383}
[2025-07-26 13:45:48] 2025-07-26 17:45:17,132 | INFO     | --------------------------------------------------
[2025-07-26 13:45:48] 2025-07-26 17:45:17,132 | INFO     | 
[2025-07-26 13:45:48] 2025-07-26 17:45:17,132 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 13:45:48] 2025-07-26 17:45:17,159 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,162 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,163 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,163 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:45:48] 2025-07-26 17:45:17,163 | INFO     | job 6745102969 has completed (purged errors)
[2025-07-26 13:45:48] 2025-07-26 17:45:17,164 | INFO     | overall cleanup function is called
[2025-07-26 13:45:48] 2025-07-26 17:45:18,172 | INFO     | --- collectZombieJob: --- 10, [12880]
[2025-07-26 13:45:48] 2025-07-26 17:45:18,172 | INFO     | zombie collector waiting for pid 12880
[2025-07-26 13:45:48] 2025-07-26 17:45:18,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:45:48] 2025-07-26 17:45:18,172 | INFO     | collected zombie processes
[2025-07-26 13:45:48] 2025-07-26 17:45:18,173 | INFO     | will attempt to kill all subprocesses of pid=12880
[2025-07-26 13:45:48] 2025-07-26 17:45:18,248 | INFO     | process IDs to be killed: [12880] (in reverse order)
[2025-07-26 13:45:48] 2025-07-26 17:45:18,302 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:45:48] 2025-07-26 17:45:18,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:45:48] 2025-07-26 17:45:18,305 | INFO     | did not find any defunct processes belonging to 12880
[2025-07-26 13:45:48] 2025-07-26 17:45:18,308 | INFO     | did not find any defunct processes belonging to 12880
[2025-07-26 13:45:48] 2025-07-26 17:45:18,309 | INFO     | ready for new job
[2025-07-26 13:45:48] 2025-07-26 17:45:18,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:45:48] 2025-07-26 17:45:18,311 | INFO     | ***************************************
[2025-07-26 13:45:48] 2025-07-26 17:45:18,311 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:45:48] 2025-07-26 17:45:18,311 | INFO     | ***************************************
[2025-07-26 13:45:48] 2025-07-26 17:45:18,312 | INFO     | 
[2025-07-26 13:45:48] 2025-07-26 17:45:18,312 | INFO     | architecture information:
[2025-07-26 13:45:48] 2025-07-26 17:45:18,313 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:45:48] 2025-07-26 17:45:18,332 | INFO     | cat /etc/os-release:
[2025-07-26 13:45:48] NAME="CentOS Linux"
[2025-07-26 13:45:48] VERSION="7 (Core)"
[2025-07-26 13:45:48] ID="centos"
[2025-07-26 13:45:48] ID_LIKE="rhel fedora"
[2025-07-26 13:45:48] VERSION_ID="7"
[2025-07-26 13:45:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:45:48] ANSI_COLOR="0;31"
[2025-07-26 13:45:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:45:48] HOME_URL="https://www.centos.org/"
[2025-07-26 13:45:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:45:48] 
[2025-07-26 13:45:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:45:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:45:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:45:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:45:48] 
[2025-07-26 13:45:48] 2025-07-26 17:45:18,334 | INFO     | ***************************************
[2025-07-26 13:45:48] 2025-07-26 17:45:18,838 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 13:45:48] 2025-07-26 17:45:18,859 | INFO     | sufficient remaining disk space (18657312768 B)
[2025-07-26 13:45:48] 2025-07-26 17:45:18,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:45:48] 2025-07-26 17:45:18,860 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:45:48] 2025-07-26 17:45:18,860 | INFO     | update_server=False
[2025-07-26 13:45:48] 2025-07-26 17:45:18,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:45:48] 2025-07-26 17:45:18,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:45:48] 2025-07-26 17:45:18,975 | INFO     | all data control threads have been joined
[2025-07-26 13:45:48] 2025-07-26 17:45:19,029 | INFO     | all payload control threads have been joined
[2025-07-26 13:45:48] 2025-07-26 17:45:19,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:45:48] 2025-07-26 17:45:19,064 | INFO     | aborting loop
[2025-07-26 13:45:48] 2025-07-26 17:45:19,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:45:48] 2025-07-26 17:45:19,385 | INFO     | all job control threads have been joined
[2025-07-26 13:45:48] 2025-07-26 17:45:19,869 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:19,870 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:19,981 | INFO     | [data] control thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,030 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,035 | INFO     | [payload] control thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,070 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,298 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,391 | INFO     | [job] control thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,645 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,720 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,747 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,929 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,936 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:20,972 | INFO     | [job] validate thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:21,175 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:21,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:45:48] 2025-07-26 17:45:25,753 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:45:48] 2025-07-26 17:45:26,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313611917120)>', '<ExcThread(monitor, started 140312278198016)>']
[2025-07-26 13:45:48] 2025-07-26 17:45:31,985 | INFO     | all workflow threads have been joined
[2025-07-26 13:45:48] 2025-07-26 17:45:31,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:45:48] 2025-07-26 17:45:31,985 | INFO     | traces error code: 0
[2025-07-26 13:45:48] 2025-07-26 17:45:31,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:45:48] 2025-07-26 17:45:48,511 | INFO     | PID=6301 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 13:45:48] 2025-07-26 17:45:48,511 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:45:48] 2025-07-26 17:45:48,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:45:48] 2025-07-26 17:45:48,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:45:48] 2025-07-26 17:45:48,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:45:48] 2025-07-26 17:45:48,512 | INFO     | [monitor] control thread has ended
[2025-07-26 13:45:48] 2025-07-26 17:45:48,627 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:45:48] 2025-07-26 17:45:48,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:45:48] 2025-07-26 17:45:48,636 [wrapper] pilotpid: 6301
[2025-07-26 13:45:48] 2025-07-26 17:45:48,641 [wrapper] Pilot exit status: 0
[2025-07-26 13:45:48] 2025-07-26 17:45:48,659 [wrapper] pandaids: 6745102969
[2025-07-26 13:45:48] 2025-07-26 17:45:48,697 [wrapper] cleanup supervisor_pilot 13174 6302
[2025-07-26 13:45:48] 2025-07-26 17:45:48,702 [wrapper] Test setup, not cleaning
[2025-07-26 13:45:48] 2025-07-26 17:45:48,707 [wrapper] apfmon messages muted
[2025-07-26 13:45:48] 2025-07-26 17:45:48,712 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:45:48] 2025-07-26 17:45:48,716 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:45:48]  *** Error codes and diagnostics ***
[2025-07-26 13:45:48]     "exeErrorCode": 0,
[2025-07-26 13:45:48]     "exeErrorDiag": "",
[2025-07-26 13:45:48]     "pilotErrorCode": 0,
[2025-07-26 13:45:48]     "pilotErrorDiag": "",
[2025-07-26 13:45:48]  *** Listing of results directory ***
[2025-07-26 13:45:48] total 395984
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer    530466 Jul 26 05:28 pilot3.tar.gz
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer      5112 Jul 26 05:42 queuedata.json
[2025-07-26 13:45:48] -rwx------ 1 boincer boincer     36292 Jul 26 05:42 runpilot2-wrapper.sh
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer       100 Jul 26 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:45:48] -rwxr-xr-x 1 boincer boincer      7986 Jul 26 11:16 run_atlas
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer       105 Jul 26 11:16 job.xml
[2025-07-26 13:45:48] -rw-r--r-- 2 boincer boincer 186611249 Jul 26 11:16 EVNT.45743347._002034.pool.root.1
[2025-07-26 13:45:48] -rw-r--r-- 2 boincer boincer     15095 Jul 26 11:16 start_atlas.sh
[2025-07-26 13:45:48] drwxrwx--x 2 boincer boincer      4096 Jul 26 11:16 shared
[2025-07-26 13:45:48] -rw-r--r-- 2 boincer boincer    542900 Jul 26 11:16 input.tar.gz
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer         0 Jul 26 11:16 boinc_lockfile
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer      2563 Jul 26 11:16 pandaJob.out
[2025-07-26 13:45:48] -rw------- 1 boincer boincer    980133 Jul 26 11:16 agis_schedconf.cvmfs.json
[2025-07-26 13:45:48] -rw------- 1 boincer boincer   1593052 Jul 26 11:16 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:45:48] drwx------ 4 boincer boincer      4096 Jul 26 11:16 pilot3
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer      5824 Jul 26 13:38 init_data.xml
[2025-07-26 13:45:48] -rw------- 1 boincer boincer 212704871 Jul 26 13:44 HITS.45743349._035712.pool.root.1
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer       530 Jul 26 13:44 boinc_task_state.xml
[2025-07-26 13:45:48] -rw------- 1 boincer boincer      1063 Jul 26 13:45 memory_monitor_summary.json
[2025-07-26 13:45:48] -rw------- 1 boincer boincer    334738 Jul 26 13:45 log.45743349._035712.job.log.tgz.1
[2025-07-26 13:45:48] -rw------- 1 boincer boincer        95 Jul 26 13:45 pilot_heartbeat.json
[2025-07-26 13:45:48] -rw------- 1 boincer boincer      7850 Jul 26 13:45 heartbeat.json
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer      8192 Jul 26 13:45 boinc_mmap_file
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer        27 Jul 26 13:45 wrapper_checkpoint.txt
[2025-07-26 13:45:48] -rw------- 1 boincer boincer       744 Jul 26 13:45 pilotlog.txt
[2025-07-26 13:45:48] -rw------- 1 boincer boincer    815465 Jul 26 13:45 log.45743349._035712.job.log.1
[2025-07-26 13:45:48] -rw------- 1 boincer boincer       357 Jul 26 13:45 output.list
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer       620 Jul 26 13:45 runtime_log
[2025-07-26 13:45:48] -rw------- 1 boincer boincer   1167360 Jul 26 13:45 result.tar.gz
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer      8655 Jul 26 13:45 runtime_log.err
[2025-07-26 13:45:48] -rw------- 1 boincer boincer       660 Jul 26 13:45 cIOMDmobqz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNX0KDm5iOdZn.diag
[2025-07-26 13:45:48] -rw-r--r-- 1 boincer boincer     21245 Jul 26 13:45 stderr.txt
[2025-07-26 13:45:48] HITS file was successfully produced:
[2025-07-26 13:45:48] -rw------- 1 boincer boincer 212704871 Jul 26 13:44 shared/HITS.pool.root.1
[2025-07-26 13:45:48]  *** Contents of shared directory: ***
[2025-07-26 13:45:48] total 391652
[2025-07-26 13:45:48] -rw-r--r-- 2 boincer boincer 186611249 Jul 26 11:16 ATLAS.root_0
[2025-07-26 13:45:48] -rw-r--r-- 2 boincer boincer     15095 Jul 26 11:16 start_atlas.sh
[2025-07-26 13:45:48] -rw-r--r-- 2 boincer boincer    542900 Jul 26 11:16 input.tar.gz
[2025-07-26 13:45:48] -rw------- 1 boincer boincer 212704871 Jul 26 13:44 HITS.pool.root.1
[2025-07-26 13:45:48] -rw------- 1 boincer boincer   1167360 Jul 26 13:45 result.tar.gz
13:45:50 (2623): run_atlas exited; CPU time 66505.291823
13:45:50 (2623): called boinc_finish(0)

</stderr_txt>
]]>

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