Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:24:46 (1579331): wrapper (7.7.26015): starting
11:24:46 (1579331): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 11:24:46] Arguments: --nthreads 8
[2025-07-26 11:24:46] Threads: 8
[2025-07-26 11:24:46] Checking for CVMFS
[2025-07-26 11:24:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:24:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:24:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:24:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:24:46] 2.13.0.0 97728 25970 295028 148782 3 197 26495773 32935936 24593 16776704 2 242082325 99.593 294093997 18421 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 11:24:46] CVMFS is ok
[2025-07-26 11:24:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:24:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:24:46] Further information can be found at the LHC@home message board.
[2025-07-26 11:24:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:24:46] Checking for apptainer binary...
[2025-07-26 11:24:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:24:46] Running /usr/bin/apptainer --version
[2025-07-26 11:24:46] apptainer version 1.4.1-1.el9
[2025-07-26 11:24:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:24:46] c7-2-37.aglt2.org
[2025-07-26 11:24:46] apptainer works
[2025-07-26 11:24:47] Set ATHENA_PROC_NUMBER=8
[2025-07-26 11:24:47] Set ATHENA_CORE_NUMBER=8
[2025-07-26 11:24:47] Starting ATLAS job with PandaID=6745102931
[2025-07-26 11:24:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:50:50]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:50:50]  mtime=0
[2025-07-26 12:50:50]  protocol_id=None
[2025-07-26 12:50:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 12:50:50]  replicas=None
[2025-07-26 12:50:50]  scope=mc23_13p6TeV
[2025-07-26 12:50:50]  status=None
[2025-07-26 12:50:50]  status_code=0
[2025-07-26 12:50:50]  storage_token=
[2025-07-26 12:50:50]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745102931/log.45743349._035674.job.log.tgz.1
[2025-07-26 12:50:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/c1/log.45743349._035674.job.log.tgz.1
[2025-07-26 12:50:50]  workdir=None
[2025-07-26 12:50:50] ]
[2025-07-26 12:50:50] 2025-07-26 16:50:07,682 | INFO     | transferring file log.45743349._035674.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745102931/log.45743349._035674.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 12:50:50] 2025-07-26 16:50:07,683 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745102931/log.45743349._035674.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._035674.job
[2025-07-26 12:50:50] 2025-07-26 16:50:07,710 | INFO     | adding to output.list: log.45743349._035674.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/c1/log.45743349._035674.job.log.tg
[2025-07-26 12:50:50] 2025-07-26 16:50:07,710 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:50:50] 2025-07-26 16:50:07,711 | INFO     | summary of transferred files:
[2025-07-26 12:50:50] 2025-07-26 16:50:07,711 | INFO     |  -- lfn=log.45743349._035674.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:50:50] 2025-07-26 16:50:07,711 | INFO     | stage-out finished correctly
[2025-07-26 12:50:50] 2025-07-26 16:50:08,945 | INFO     | monitor loop #353: job 0:6745102931 is in state 'finished'
[2025-07-26 12:50:50] 2025-07-26 16:50:08,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:50:50] 2025-07-26 16:50:09,216 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:50:50] 2025-07-26 16:50:10,157 | INFO     | job 6745102931 has state=finished
[2025-07-26 12:50:50] 2025-07-26 16:50:10,164 | INFO     | preparing for final server update for job 6745102931 in state='finished'
[2025-07-26 12:50:50] 2025-07-26 16:50:10,166 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:50:50] 2025-07-26 16:50:10,167 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:50:50] 2025-07-26 16:50:10,167 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:50:50] 2025-07-26 16:50:10,167 | INFO     | job 6745102931 has finished - writing final server update
[2025-07-26 12:50:50] 2025-07-26 16:50:10,167 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:50:50] 2025-07-26 16:50:10,175 | INFO     | executing command: lscpu
[2025-07-26 12:50:50] 2025-07-26 16:50:10,246 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:50:50] 2025-07-26 16:50:11,454 | INFO     | monitor loop #354: job 0:6745102931 is in state 'finished'
[2025-07-26 12:50:50] 2025-07-26 16:50:11,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:50:50] 2025-07-26 16:50:13,959 | INFO     | monitor loop #355: job 0:6745102931 is in state 'finished'
[2025-07-26 12:50:50] 2025-07-26 16:50:13,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:50:50] 2025-07-26 16:50:16,467 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 12:50:50] 2025-07-26 16:50:16,469 | INFO     | monitor loop #356: job 0:6745102931 is in state 'finished'
[2025-07-26 12:50:50] 2025-07-26 16:50:16,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:50:50] 2025-07-26 16:50:16,485 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3321.3205416666656
[2025-07-26 12:50:50] 2025-07-26 16:50:16,531 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745102931/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:50:50] 2025-07-26 16:50:16,532 | INFO     | extracted standard info from prmon json
[2025-07-26 12:50:50] 2025-07-26 16:50:16,532 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:50:50] 2025-07-26 16:50:16,532 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:50:50] 2025-07-26 16:50:16,532 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:50:50] 2025-07-26 16:50:16,532 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:50:50] 2025-07-26 16:50:16,538 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:50:50] 2025-07-26 16:50:16,538 | INFO     | sum of square deviations: 141539398.0
[2025-07-26 12:50:50] 2025-07-26 16:50:16,539 | INFO     | sum of deviations: -5231371772.999999
[2025-07-26 12:50:50] 2025-07-26 16:50:16,539 | INFO     | mean x: 1753546155.0
[2025-07-26 12:50:50] 2025-07-26 16:50:16,539 | INFO     | mean y: 2239476.935064935
[2025-07-26 12:50:50] 2025-07-26 16:50:16,539 | INFO     | -- intersect: 64814242265.86653
[2025-07-26 12:50:50] 2025-07-26 16:50:16,539 | INFO     | intersect: 64814242265.86653
[2025-07-26 12:50:50] 2025-07-26 16:50:16,539 | INFO     | chi2: 0.02983927338861667
[2025-07-26 12:50:50] 2025-07-26 16:50:16,540 | INFO     | -- intersect: 64814242265.86653
[2025-07-26 12:50:50] 2025-07-26 16:50:16,540 | INFO     | current memory leak: -36.96 B/s (using 77 data points, chi2=0.03)
[2025-07-26 12:50:50] 2025-07-26 16:50:16,540 | INFO     | could have reported an average CPU frequency of 3354 MHz (6 samples)
[2025-07-26 12:50:50] 2025-07-26 16:50:16,540 | INFO     | ..............................
[2025-07-26 12:50:50] 2025-07-26 16:50:16,540 | INFO     | . Timing measurements:
[2025-07-26 12:50:50] 2025-07-26 16:50:16,540 | INFO     | . get job = 0 s
[2025-07-26 12:50:50] 2025-07-26 16:50:16,540 | INFO     | . initial setup = 4 s
[2025-07-26 12:50:50] 2025-07-26 16:50:16,541 | INFO     | . payload setup = 8 s
[2025-07-26 12:50:50] 2025-07-26 16:50:16,541 | INFO     | . stage-in = 0 s
[2025-07-26 12:50:50] 2025-07-26 16:50:16,541 | INFO     | . payload execution = 5075 s
[2025-07-26 12:50:50] 2025-07-26 16:50:16,541 | INFO     | . stage-out = 1 s
[2025-07-26 12:50:50] 2025-07-26 16:50:16,541 | INFO     | . log creation = 0 s
[2025-07-26 12:50:50] 2025-07-26 16:50:16,541 | INFO     | ..............................
[2025-07-26 12:50:50] 2025-07-26 16:50:16,693 | INFO     | 
[2025-07-26 12:50:50] 2025-07-26 16:50:16,693 | INFO     | job summary report
[2025-07-26 12:50:50] 2025-07-26 16:50:16,693 | INFO     | --------------------------------------------------
[2025-07-26 12:50:50] 2025-07-26 16:50:16,693 | INFO     | PanDA job id: 6745102931
[2025-07-26 12:50:50] 2025-07-26 16:50:16,693 | INFO     | task id: 45743349
[2025-07-26 12:50:50] 2025-07-26 16:50:16,693 | INFO     | errors: (none)
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | pilot state: finished 
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | transexitcode: 0
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | exeerrorcode: 0
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | exeerrordiag: 
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | exitcode: 0
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | exitmsg: OK
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | cpuconsumptiontime: 34886 s
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | nevents: 400
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | neventsw: 0
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | pid: 1602662
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | pgrp: 1602662
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | corecount: 8
[2025-07-26 12:50:50] 2025-07-26 16:50:16,694 | INFO     | event service: False
[2025-07-26 12:50:50] 2025-07-26 16:50:16,695 | INFO     | sizes: {0: 2397360, 1: 2397502, 6: 2397764, 11: 2397792, 5087: 2424259, 5088: 2424258, 5090: 2433440, 5091: 2433496, 5099: 2433690}
[2025-07-26 12:50:50] 2025-07-26 16:50:16,695 | INFO     | --------------------------------------------------
[2025-07-26 12:50:50] 2025-07-26 16:50:16,695 | INFO     | 
[2025-07-26 12:50:50] 2025-07-26 16:50:16,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 12:50:50] 2025-07-26 16:50:16,718 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,718 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,720 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:50:50] 2025-07-26 16:50:16,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,720 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:50:50] 2025-07-26 16:50:16,720 | INFO     | job 6745102931 has completed (purged errors)
[2025-07-26 12:50:50] 2025-07-26 16:50:16,720 | INFO     | overall cleanup function is called
[2025-07-26 12:50:50] 2025-07-26 16:50:17,734 | INFO     | --- collectZombieJob: --- 10, [1602662]
[2025-07-26 12:50:50] 2025-07-26 16:50:17,734 | INFO     | zombie collector waiting for pid 1602662
[2025-07-26 12:50:50] 2025-07-26 16:50:17,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:50:50] 2025-07-26 16:50:17,734 | INFO     | collected zombie processes
[2025-07-26 12:50:50] 2025-07-26 16:50:17,735 | INFO     | will attempt to kill all subprocesses of pid=1602662
[2025-07-26 12:50:50] 2025-07-26 16:50:18,870 | INFO     | process IDs to be killed: [1602662] (in reverse order)
[2025-07-26 12:50:50] 2025-07-26 16:50:19,120 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:50:50] 2025-07-26 16:50:19,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:50:50] 2025-07-26 16:50:19,185 | INFO     | did not find any defunct processes belonging to 1602662
[2025-07-26 12:50:50] 2025-07-26 16:50:19,238 | INFO     | did not find any defunct processes belonging to 1602662
[2025-07-26 12:50:50] 2025-07-26 16:50:19,242 | INFO     | ready for new job
[2025-07-26 12:50:50] 2025-07-26 16:50:19,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:50:50] 2025-07-26 16:50:19,244 | INFO     | ***************************************
[2025-07-26 12:50:50] 2025-07-26 16:50:19,244 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:50:50] 2025-07-26 16:50:19,244 | INFO     | ***************************************
[2025-07-26 12:50:50] 2025-07-26 16:50:19,244 | INFO     | 
[2025-07-26 12:50:50] 2025-07-26 16:50:19,253 | INFO     | architecture information:
[2025-07-26 12:50:50] 2025-07-26 16:50:19,257 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:50:50] 2025-07-26 16:50:19,290 | INFO     | cat /etc/os-release:
[2025-07-26 12:50:50] NAME="CentOS Linux"
[2025-07-26 12:50:50] VERSION="7 (Core)"
[2025-07-26 12:50:50] ID="centos"
[2025-07-26 12:50:50] ID_LIKE="rhel fedora"
[2025-07-26 12:50:50] VERSION_ID="7"
[2025-07-26 12:50:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:50:50] ANSI_COLOR="0;31"
[2025-07-26 12:50:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:50:50] HOME_URL="https://www.centos.org/"
[2025-07-26 12:50:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:50:50] 
[2025-07-26 12:50:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:50:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:50:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:50:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:50:50] 
[2025-07-26 12:50:50] 2025-07-26 16:50:19,291 | INFO     | ***************************************
[2025-07-26 12:50:50] 2025-07-26 16:50:19,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 12:50:50] 2025-07-26 16:50:19,831 | INFO     | sufficient remaining disk space (75807850496 B)
[2025-07-26 12:50:50] 2025-07-26 16:50:19,832 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:50:50] 2025-07-26 16:50:19,832 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:50:50] 2025-07-26 16:50:19,832 | INFO     | update_server=False
[2025-07-26 12:50:50] 2025-07-26 16:50:19,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:50:50] 2025-07-26 16:50:19,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:50:50] 2025-07-26 16:50:19,989 | INFO     | aborting loop
[2025-07-26 12:50:50] 2025-07-26 16:50:19,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:50:50] 2025-07-26 16:50:20,277 | INFO     | all data control threads have been joined
[2025-07-26 12:50:50] 2025-07-26 16:50:20,839 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:20,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:50:50] 2025-07-26 16:50:20,995 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:21,078 | INFO     | all job control threads have been joined
[2025-07-26 12:50:50] 2025-07-26 16:50:21,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:21,109 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:21,129 | INFO     | all payload control threads have been joined
[2025-07-26 12:50:50] 2025-07-26 16:50:21,284 | INFO     | [data] control thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:21,389 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:21,521 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:21,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:50:50] 2025-07-26 16:50:21,860 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:21,958 | INFO     | [job] validate thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:21,959 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:22,084 | INFO     | [job] control thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:22,135 | INFO     | [payload] control thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:22,160 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:22,733 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:22,945 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:24,006 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:50:50] 2025-07-26 16:50:24,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929169348416)>', '<ExcThread(monitor, started 139928683931392)>']
[2025-07-26 12:50:50] 2025-07-26 16:50:29,426 | INFO     | all workflow threads have been joined
[2025-07-26 12:50:50] 2025-07-26 16:50:29,426 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:50:50] 2025-07-26 16:50:29,427 | INFO     | traces error code: 0
[2025-07-26 12:50:50] 2025-07-26 16:50:29,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:50:50] 2025-07-26 16:50:49,699 | INFO     | PID=1584646 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:50:50] 2025-07-26 16:50:49,700 | INFO     | .. there are 52 such processes running
[2025-07-26 12:50:50] 2025-07-26 16:50:49,700 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:50:50] 2025-07-26 16:50:49,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:50:50] 2025-07-26 16:50:49,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:50:50] 2025-07-26 16:50:49,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:50:50] 2025-07-26 16:50:49,701 | INFO     | [monitor] control thread has ended
[2025-07-26 12:50:50] 2025-07-26 16:50:50,187 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:50:50] 2025-07-26 16:50:50,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:50:50] 2025-07-26 16:50:50,200 [wrapper] pilotpid: 1584646
[2025-07-26 12:50:50] 2025-07-26 16:50:50,203 [wrapper] Pilot exit status: 0
[2025-07-26 12:50:50] 2025-07-26 16:50:50,256 [wrapper] pandaids: 6745102931
[2025-07-26 12:50:50] 2025-07-26 16:50:50,449 [wrapper] cleanup supervisor_pilot 3673545 1584647
[2025-07-26 12:50:50] 2025-07-26 16:50:50,456 [wrapper] Test setup, not cleaning
[2025-07-26 12:50:50] 2025-07-26 16:50:50,486 [wrapper] apfmon messages muted
[2025-07-26 12:50:50] 2025-07-26 16:50:50,514 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:50:50] 2025-07-26 16:50:50,531 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:50:50]  *** Error codes and diagnostics ***
[2025-07-26 12:50:50]     "exeErrorCode": 0,
[2025-07-26 12:50:50]     "exeErrorDiag": "",
[2025-07-26 12:50:50]     "pilotErrorCode": 0,
[2025-07-26 12:50:50]     "pilotErrorDiag": "",
[2025-07-26 12:50:50]  *** Listing of results directory ***
[2025-07-26 12:50:50] total 354016
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 05:28 pilot3.tar.gz
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 05:38 queuedata.json
[2025-07-26 12:50:50] -rwx------. 1 boincer umatlas     36292 Jul 26 05:39 runpilot2-wrapper.sh
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:50:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:24 run_atlas
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:24 job.xml
[2025-07-26 12:50:50] -rw-r--r--. 2 boincer umatlas 145051989 Jul 26 11:24 EVNT.45743347._002031.pool.root.1
[2025-07-26 12:50:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:24 start_atlas.sh
[2025-07-26 12:50:50] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:24 shared
[2025-07-26 12:50:50] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 11:24 input.tar.gz
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:24 boinc_lockfile
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 11:24 pandaJob.out
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas    980133 Jul 26 11:24 agis_schedconf.cvmfs.json
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:25 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:50:50] drwx------. 4 boincer umatlas      4096 Jul 26 11:25 pilot3
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas      6932 Jul 26 12:46 init_data.xml
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas 211977609 Jul 26 12:49 HITS.45743349._035674.pool.root.1
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas       529 Jul 26 12:49 boinc_task_state.xml
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas      1055 Jul 26 12:50 memory_monitor_summary.json
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas    308555 Jul 26 12:50 log.45743349._035674.job.log.tgz.1
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas      7791 Jul 26 12:50 heartbeat.json
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:50 boinc_mmap_file
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas       823 Jul 26 12:50 pilotlog.txt
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas        95 Jul 26 12:50 pilot_heartbeat.json
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:50 wrapper_checkpoint.txt
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas    493280 Jul 26 12:50 log.45743349._035674.job.log.1
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas       357 Jul 26 12:50 output.list
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:50 runtime_log
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas    819200 Jul 26 12:50 result.tar.gz
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas       654 Jul 26 12:50 vu2KDmiYqz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhW0KDmTNWG1m.diag
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 12:50 runtime_log.err
[2025-07-26 12:50:50] -rw-r--r--. 1 boincer umatlas     21786 Jul 26 12:50 stderr.txt
[2025-07-26 12:50:50] HITS file was successfully produced:
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas 211977609 Jul 26 12:49 shared/HITS.pool.root.1
[2025-07-26 12:50:50]  *** Contents of shared directory: ***
[2025-07-26 12:50:50] total 350024
[2025-07-26 12:50:50] -rw-r--r--. 2 boincer umatlas 145051989 Jul 26 11:24 ATLAS.root_0
[2025-07-26 12:50:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:24 start_atlas.sh
[2025-07-26 12:50:50] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 11:24 input.tar.gz
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas 211977609 Jul 26 12:49 HITS.pool.root.1
[2025-07-26 12:50:50] -rw-------. 1 boincer umatlas    819200 Jul 26 12:50 result.tar.gz
12:50:52 (1579331): run_atlas exited; CPU time 34913.187119
12:50:52 (1579331): called boinc_finish(0)

</stderr_txt>
]]>

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