Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:00:37 (3218121): wrapper (7.7.26015): starting
04:00:37 (3218121): wrapper: running run_atlas (--nthreads 2)
[2025-07-27 04:00:37] Arguments: --nthreads 2
[2025-07-27 04:00:37] Threads: 2
[2025-07-27 04:00:37] Checking for CVMFS
[2025-07-27 04:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 04:00:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 04:00:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 04:00:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 04:00:37] 2.9.2.0 1770272 7511 61492 148795 0 57 34866078 36864001 0 130560 0 3788792 99.985 277827 2706 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 04:00:37] CVMFS is ok
[2025-07-27 04:00:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 04:00:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 04:00:37] Further information can be found at the LHC@home message board.
[2025-07-27 04:00:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 04:00:37] Checking for apptainer binary...
[2025-07-27 04:00:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 04:00:37] Running /usr/bin/apptainer --version
[2025-07-27 04:00:37] apptainer version 1.4.1-1.1
[2025-07-27 04:00:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 04:00:37] madmaxA275
[2025-07-27 04:00:37] apptainer works
[2025-07-27 04:00:37] Set ATHENA_PROC_NUMBER=2
[2025-07-27 04:00:37] Set ATHENA_CORE_NUMBER=2
[2025-07-27 04:00:37] Starting ATLAS job with PandaID=6745098650
[2025-07-27 04:00:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:24:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:24:22] 2025-07-27 04:23:47,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:24:22] 2025-07-27 04:23:48,263 | INFO     | PID=3221751 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 06:24:22] 2025-07-27 04:23:49,811 | INFO     | monitor loop #661: job 0:6745098650 is in state 'finished'
[2025-07-27 06:24:22] 2025-07-27 04:23:49,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,167 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 06:24:22] 2025-07-27 04:23:51,168 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3400.2415000000005
[2025-07-27 06:24:22] 2025-07-27 04:23:51,168 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745098650/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,169 | INFO     | extracted standard info from prmon json
[2025-07-27 06:24:22] 2025-07-27 04:23:51,169 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:24:22] 2025-07-27 04:23:51,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:24:22] 2025-07-27 04:23:51,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:24:22] 2025-07-27 04:23:51,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:24:22] 2025-07-27 04:23:51,170 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:24:22] 2025-07-27 04:23:51,170 | INFO     | sum of square deviations: 850825255.0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,171 | INFO     | sum of deviations: 18539743603.000004
[2025-07-27 06:24:22] 2025-07-27 04:23:51,171 | INFO     | mean x: 1753585919.5
[2025-07-27 06:24:22] 2025-07-27 04:23:51,171 | INFO     | mean y: 2285292.557142857
[2025-07-27 06:24:22] 2025-07-27 04:23:51,171 | INFO     | -- intersect: -38208890436.30742
[2025-07-27 06:24:22] 2025-07-27 04:23:51,171 | INFO     | intersect: -38208890436.30742
[2025-07-27 06:24:22] 2025-07-27 04:23:51,171 | INFO     | chi2: 1.3850260438730897
[2025-07-27 06:24:22] 2025-07-27 04:23:51,171 | INFO     | sum of square deviations: 762879420.0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | sum of deviations: 17977032877.000004
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | mean x: 1753585767.0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | mean y: 2284316.3259259257
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | -- intersect: -41320457075.75182
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | intersect: -41320457075.75182
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | chi2: 1.3861496169120457
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | current chi2=1.3861496169120457 (change=-0.08112288169066391 %)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | right removable region: 134
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | sum of square deviations: 762879420.0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | sum of deviations: 3309423484.0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | mean x: 1753586072.0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | mean y: 2311030.5703703705
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | -- intersect: -7604866166.439499
[2025-07-27 06:24:22] 2025-07-27 04:23:51,172 | INFO     | intersect: -7604866166.439499
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | chi2: 0.0037129451362381037
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | current chi2=0.0037129451362381037 (change=99.73192235967959 %)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | sum of square deviations: 681212772.5
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | sum of deviations: 2661971405.5
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | mean x: 1753586224.5
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | mean y: 2312233.1461538463
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | -- intersect: -6850167014.367814
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | intersect: -6850167014.367814
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | chi2: 0.0034225091921837986
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | current chi2=0.0034225091921837986 (change=7.822252508383955 %)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | left removable region: 20
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | sum of square deviations: 459366752.5
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | sum of deviations: 1622395985.5000002
[2025-07-27 06:24:22] 2025-07-27 04:23:51,173 | INFO     | mean x: 1753586346.5
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | mean y: 2314728.6403508773
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | -- intersect: -6191018666.312328
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | intersect: -6191018666.312328
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | chi2: 0.002614187332073653
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | -- intersect: -6191018666.312328
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | current memory leak: 3.53 B/s (using 114 data points, chi2=0.00)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | could have reported an average CPU frequency of 4061 MHz (8 samples)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | ..............................
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | . Timing measurements:
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | . get job = 0 s
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | . initial setup = 1 s
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | . payload setup = 8 s
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | . stage-in = 0 s
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | . payload execution = 8536 s
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | . stage-out = 0 s
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | . log creation = 0 s
[2025-07-27 06:24:22] 2025-07-27 04:23:51,174 | INFO     | ..............................
[2025-07-27 06:24:22] 2025-07-27 04:23:51,203 | INFO     | 
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | job summary report
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | --------------------------------------------------
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | PanDA job id: 6745098650
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | task id: 45743349
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | errors: (none)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | pilot state: finished 
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | transexitcode: 0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | exeerrorcode: 0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | exeerrordiag: 
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | exitcode: 0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | exitmsg: OK
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | cpuconsumptiontime: 16698 s
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | nevents: 400
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | neventsw: 0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | pid: 3228216
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | pgrp: 3228216
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | corecount: 2
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | event service: False
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | sizes: {0: 2397427, 6: 2397689, 10: 2397717, 8549: 2425768, 8550: 2434772, 8553: 2434828, 8563: 2435150}
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | --------------------------------------------------
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | 
[2025-07-27 06:24:22] 2025-07-27 04:23:51,204 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | job 6745098650 has completed (purged errors)
[2025-07-27 06:24:22] 2025-07-27 04:23:51,215 | INFO     | overall cleanup function is called
[2025-07-27 06:24:22] 2025-07-27 04:23:52,221 | INFO     | --- collectZombieJob: --- 10, [3228216]
[2025-07-27 06:24:22] 2025-07-27 04:23:52,221 | INFO     | zombie collector waiting for pid 3228216
[2025-07-27 06:24:22] 2025-07-27 04:23:52,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:24:22] 2025-07-27 04:23:52,222 | INFO     | collected zombie processes
[2025-07-27 06:24:22] 2025-07-27 04:23:52,222 | INFO     | will attempt to kill all subprocesses of pid=3228216
[2025-07-27 06:24:22] 2025-07-27 04:23:52,261 | INFO     | process IDs to be killed: [3228216] (in reverse order)
[2025-07-27 06:24:22] 2025-07-27 04:23:52,283 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:24:22] 2025-07-27 04:23:52,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:24:22] 2025-07-27 04:23:52,284 | INFO     | did not find any defunct processes belonging to 3228216
[2025-07-27 06:24:22] 2025-07-27 04:23:52,285 | INFO     | did not find any defunct processes belonging to 3228216
[2025-07-27 06:24:22] 2025-07-27 04:23:52,285 | INFO     | ready for new job
[2025-07-27 06:24:22] 2025-07-27 04:23:52,285 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:24:22] 2025-07-27 04:23:52,286 | INFO     | ***************************************
[2025-07-27 06:24:22] 2025-07-27 04:23:52,286 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:24:22] 2025-07-27 04:23:52,286 | INFO     | ***************************************
[2025-07-27 06:24:22] 2025-07-27 04:23:52,286 | INFO     | 
[2025-07-27 06:24:22] 2025-07-27 04:23:52,286 | INFO     | architecture information:
[2025-07-27 06:24:22] 2025-07-27 04:23:52,286 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:24:22] 2025-07-27 04:23:52,294 | INFO     | cat /etc/os-release:
[2025-07-27 06:24:22] NAME="CentOS Linux"
[2025-07-27 06:24:22] VERSION="7 (Core)"
[2025-07-27 06:24:22] ID="centos"
[2025-07-27 06:24:22] ID_LIKE="rhel fedora"
[2025-07-27 06:24:22] VERSION_ID="7"
[2025-07-27 06:24:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:24:22] ANSI_COLOR="0;31"
[2025-07-27 06:24:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:24:22] HOME_URL="https://www.centos.org/"
[2025-07-27 06:24:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:24:22] 
[2025-07-27 06:24:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:24:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:24:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:24:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:24:22] 
[2025-07-27 06:24:22] 2025-07-27 04:23:52,294 | INFO     | ***************************************
[2025-07-27 06:24:22] 2025-07-27 04:23:52,798 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 06:24:22] 2025-07-27 04:23:52,809 | INFO     | sufficient remaining disk space (244924284928 B)
[2025-07-27 06:24:22] 2025-07-27 04:23:52,809 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:24:22] 2025-07-27 04:23:52,809 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:24:22] 2025-07-27 04:23:52,809 | INFO     | update_server=False
[2025-07-27 06:24:22] 2025-07-27 04:23:52,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:24:22] 2025-07-27 04:23:52,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:24:22] 2025-07-27 04:23:52,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:24:22] 2025-07-27 04:23:52,987 | INFO     | all job control threads have been joined
[2025-07-27 06:24:22] 2025-07-27 04:23:53,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:24:22] 2025-07-27 04:23:53,321 | INFO     | aborting loop
[2025-07-27 06:24:22] 2025-07-27 04:23:53,529 | INFO     | all data control threads have been joined
[2025-07-27 06:24:22] 2025-07-27 04:23:53,815 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:53,816 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:53,830 | INFO     | all payload control threads have been joined
[2025-07-27 06:24:22] 2025-07-27 04:23:53,992 | INFO     | [job] control thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,031 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:24:22] 2025-07-27 04:23:54,261 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,327 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,405 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,425 | INFO     | [job] validate thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,498 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,535 | INFO     | [data] control thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,616 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,835 | INFO     | [payload] control thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:54,897 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:56,093 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:23:56,816 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:24:03,424 | INFO     | job.realtimelogging is not enabled
[2025-07-27 06:24:22] 2025-07-27 04:24:04,430 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:24:22] 2025-07-27 04:24:05,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098549167936)>', '<ExcThread(monitor, started 140098041526016)>']
[2025-07-27 06:24:22] 2025-07-27 04:24:10,057 | INFO     | all workflow threads have been joined
[2025-07-27 06:24:22] 2025-07-27 04:24:10,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:24:22] 2025-07-27 04:24:10,057 | INFO     | traces error code: 0
[2025-07-27 06:24:22] 2025-07-27 04:24:10,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:24:22] 2025-07-27 04:24:22,382 | INFO     | PID=3221751 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 06:24:22] 2025-07-27 04:24:22,382 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:24:22] 2025-07-27 04:24:22,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:24:22] 2025-07-27 04:24:22,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:24:22] 2025-07-27 04:24:22,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:24:22] 2025-07-27 04:24:22,382 | INFO     | [monitor] control thread has ended
[2025-07-27 06:24:22] 2025-07-27 04:24:22,421 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:24:22] 2025-07-27 04:24:22,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:24:22] 2025-07-27 04:24:22,425 [wrapper] pilotpid: 3221751
[2025-07-27 06:24:22] 2025-07-27 04:24:22,428 [wrapper] Pilot exit status: 0
[2025-07-27 06:24:22] 2025-07-27 04:24:22,433 [wrapper] pandaids: 6745098650
[2025-07-27 06:24:22] 2025-07-27 04:24:22,447 [wrapper] cleanup supervisor_pilot 3245034 3221752
[2025-07-27 06:24:22] 2025-07-27 04:24:22,449 [wrapper] Test setup, not cleaning
[2025-07-27 06:24:22] 2025-07-27 04:24:22,451 [wrapper] apfmon messages muted
[2025-07-27 06:24:22] 2025-07-27 04:24:22,453 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:24:22] 2025-07-27 04:24:22,455 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:24:22]  *** Error codes and diagnostics ***
[2025-07-27 06:24:22]     "exeErrorCode": 0,
[2025-07-27 06:24:22]     "exeErrorDiag": "",
[2025-07-27 06:24:22]     "pilotErrorCode": 0,
[2025-07-27 06:24:22]     "pilotErrorDiag": "",
[2025-07-27 06:24:22]  *** Listing of results directory ***
[2025-07-27 06:24:22] total 389948
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc    530466 Jul 26 08:42 pilot3.tar.gz
[2025-07-27 06:24:22] -rwx------ 1 boinc boinc     36292 Jul 26 08:54 runpilot2-wrapper.sh
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc      5112 Jul 26 08:54 queuedata.json
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc       100 Jul 27 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:24:22] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 04:00 run_atlas
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc       105 Jul 27 04:00 job.xml
[2025-07-27 06:24:22] -rw-r--r-- 2 boinc boinc 186814344 Jul 27 04:00 EVNT.45743347._001909.pool.root.1
[2025-07-27 06:24:22] -rw-r--r-- 2 boinc boinc    542891 Jul 27 04:00 input.tar.gz
[2025-07-27 06:24:22] -rw-r--r-- 2 boinc boinc     15095 Jul 27 04:00 start_atlas.sh
[2025-07-27 06:24:22] drwxrwx--x 2 boinc boinc      4096 Jul 27 04:00 shared
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc         0 Jul 27 04:00 boinc_setup_complete
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc      6211 Jul 27 04:00 init_data.xml
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc         0 Jul 27 04:00 boinc_lockfile
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc      2562 Jul 27 04:00 pandaJob.out
[2025-07-27 06:24:22] -rw------- 1 boinc boinc    980125 Jul 27 04:00 agis_schedconf.cvmfs.json
[2025-07-27 06:24:22] -rw------- 1 boinc boinc   1593052 Jul 27 04:00 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:24:22] drwx------ 4 boinc boinc      4096 Jul 27 04:00 pilot3
[2025-07-27 06:24:22] -rw------- 1 boinc boinc 206522644 Jul 27 06:23 HITS.45743349._033817.pool.root.1
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc       530 Jul 27 06:23 boinc_task_state.xml
[2025-07-27 06:24:22] -rw------- 1 boinc boinc        95 Jul 27 06:23 pilot_heartbeat.json
[2025-07-27 06:24:22] -rw------- 1 boinc boinc      1018 Jul 27 06:23 memory_monitor_summary.json
[2025-07-27 06:24:22] -rw------- 1 boinc boinc    246024 Jul 27 06:23 log.45743349._033817.job.log.tgz.1
[2025-07-27 06:24:22] -rw------- 1 boinc boinc      7757 Jul 27 06:23 heartbeat.json
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc        27 Jul 27 06:24 wrapper_checkpoint.txt
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc      8192 Jul 27 06:24 boinc_mmap_file
[2025-07-27 06:24:22] -rw------- 1 boinc boinc       747 Jul 27 06:24 pilotlog.txt
[2025-07-27 06:24:22] -rw------- 1 boinc boinc    802768 Jul 27 06:24 log.45743349._033817.job.log.1
[2025-07-27 06:24:22] -rw------- 1 boinc boinc       357 Jul 27 06:24 output.list
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc       620 Jul 27 06:24 runtime_log
[2025-07-27 06:24:22] -rw------- 1 boinc boinc   1064960 Jul 27 06:24 result.tar.gz
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc      8754 Jul 27 06:24 runtime_log.err
[2025-07-27 06:24:22] -rw------- 1 boinc boinc       663 Jul 27 06:24 bWBLDmsynz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBK0KDmW68a1m.diag
[2025-07-27 06:24:22] -rw-r--r-- 1 boinc boinc     21257 Jul 27 06:24 stderr.txt
[2025-07-27 06:24:22] HITS file was successfully produced:
[2025-07-27 06:24:22] -rw------- 1 boinc boinc 206522644 Jul 27 06:23 shared/HITS.pool.root.1
[2025-07-27 06:24:22]  *** Contents of shared directory: ***
[2025-07-27 06:24:22] total 385716
[2025-07-27 06:24:22] -rw-r--r-- 2 boinc boinc 186814344 Jul 27 04:00 ATLAS.root_0
[2025-07-27 06:24:22] -rw-r--r-- 2 boinc boinc    542891 Jul 27 04:00 input.tar.gz
[2025-07-27 06:24:22] -rw-r--r-- 2 boinc boinc     15095 Jul 27 04:00 start_atlas.sh
[2025-07-27 06:24:22] -rw------- 1 boinc boinc 206522644 Jul 27 06:23 HITS.pool.root.1
[2025-07-27 06:24:22] -rw------- 1 boinc boinc   1064960 Jul 27 06:24 result.tar.gz
06:24:24 (3218121): run_atlas exited; CPU time 16741.105530
06:24:24 (3218121): called boinc_finish(0)

</stderr_txt>
]]>

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