Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:21:24 (2615212): wrapper (7.7.26015): starting
11:21:24 (2615212): wrapper: running run_atlas (--nthreads 10)
[2025-07-26 11:21:24] Arguments: --nthreads 10
[2025-07-26 11:21:24] Threads: 10
[2025-07-26 11:21:24] Checking for CVMFS
[2025-07-26 11:21:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:21:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:21:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:21:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:21:25] 2.13.0.0 1101976 17115 298444 148782 0 290 27234530 32935937 9757 16776704 0 62079234 99.698 60484889 24636 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 11:21:25] CVMFS is ok
[2025-07-26 11:21:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:21:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:21:25] Further information can be found at the LHC@home message board.
[2025-07-26 11:21:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:21:25] Checking for apptainer binary...
[2025-07-26 11:21:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:21:25] Running /usr/bin/apptainer --version
[2025-07-26 11:21:25] apptainer version 1.4.1-1.el9
[2025-07-26 11:21:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:21:25] c-5-2.aglt2.org
[2025-07-26 11:21:25] apptainer works
[2025-07-26 11:21:25] Set ATHENA_PROC_NUMBER=10
[2025-07-26 11:21:25] Set ATHENA_CORE_NUMBER=10
[2025-07-26 11:21:25] Starting ATLAS job with PandaID=6745102905
[2025-07-26 11:21:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:47:36]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:47:36] 2025-07-26 20:47:01,812 | INFO     | monitor loop #1095: job 0:6745102905 is in state 'finished'
[2025-07-26 16:47:36] 2025-07-26 20:47:01,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,478 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 16:47:36] 2025-07-26 20:47:02,486 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.205225000001
[2025-07-26 16:47:36] 2025-07-26 20:47:02,494 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745102905/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,495 | INFO     | extracted standard info from prmon json
[2025-07-26 16:47:36] 2025-07-26 20:47:02,495 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 16:47:36] 2025-07-26 20:47:02,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 16:47:36] 2025-07-26 20:47:02,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:47:36] 2025-07-26 20:47:02,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:47:36] 2025-07-26 20:47:02,501 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:47:36] 2025-07-26 20:47:02,502 | INFO     | sum of square deviations: 10160870308.199953
[2025-07-26 16:47:36] 2025-07-26 20:47:02,505 | INFO     | sum of deviations: -109620990501.59982
[2025-07-26 16:47:36] 2025-07-26 20:47:02,505 | INFO     | mean x: 1753553062.425
[2025-07-26 16:47:36] 2025-07-26 20:47:02,505 | INFO     | mean y: 2299656.475
[2025-07-26 16:47:36] 2025-07-26 20:47:02,505 | INFO     | -- intersect: 18920583009.133595
[2025-07-26 16:47:36] 2025-07-26 20:47:02,505 | INFO     | intersect: 18920583009.133595
[2025-07-26 16:47:36] 2025-07-26 20:47:02,506 | INFO     | chi2: 2.921643515674994
[2025-07-26 16:47:36] 2025-07-26 20:47:02,506 | INFO     | sum of square deviations: 9692077373.853981
[2025-07-26 16:47:36] 2025-07-26 20:47:02,509 | INFO     | sum of deviations: -87625061897.12062
[2025-07-26 16:47:36] 2025-07-26 20:47:02,509 | INFO     | mean x: 1753552909.9396825
[2025-07-26 16:47:36] 2025-07-26 20:47:02,509 | INFO     | mean y: 2306739.9936507936
[2025-07-26 16:47:36] 2025-07-26 20:47:02,509 | INFO     | -- intersect: 15855995928.221916
[2025-07-26 16:47:36] 2025-07-26 20:47:02,509 | INFO     | intersect: 15855995928.221916
[2025-07-26 16:47:36] 2025-07-26 20:47:02,510 | INFO     | chi2: 2.263119278115146
[2025-07-26 16:47:36] 2025-07-26 20:47:02,510 | INFO     | current chi2=2.263119278115146 (change=22.539513600026158 %)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,510 | INFO     | right removable region: 314
[2025-07-26 16:47:36] 2025-07-26 20:47:02,510 | INFO     | sum of square deviations: 9691896813.853981
[2025-07-26 16:47:36] 2025-07-26 20:47:02,513 | INFO     | sum of deviations: -156405524073.65396
[2025-07-26 16:47:36] 2025-07-26 20:47:02,513 | INFO     | mean x: 1753553214.9396825
[2025-07-26 16:47:36] 2025-07-26 20:47:02,514 | INFO     | mean y: 2314778.8603174603
[2025-07-26 16:47:36] 2025-07-26 20:47:02,514 | INFO     | -- intersect: 28300739209.21909
[2025-07-26 16:47:36] 2025-07-26 20:47:02,514 | INFO     | intersect: 28300739209.21909
[2025-07-26 16:47:36] 2025-07-26 20:47:02,514 | INFO     | chi2: 1.436455749685099
[2025-07-26 16:47:36] 2025-07-26 20:47:02,515 | INFO     | current chi2=1.436455749685099 (change=50.833982928501406 %)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,515 | INFO     | sum of square deviations: 9237574756.867815
[2025-07-26 16:47:36] 2025-07-26 20:47:02,518 | INFO     | sum of deviations: -148610639607.1968
[2025-07-26 16:47:36] 2025-07-26 20:47:02,518 | INFO     | mean x: 1753553367.4548388
[2025-07-26 16:47:36] 2025-07-26 20:47:02,518 | INFO     | mean y: 2312144.164516129
[2025-07-26 16:47:36] 2025-07-26 20:47:02,518 | INFO     | -- intersect: 28212821328.84774
[2025-07-26 16:47:36] 2025-07-26 20:47:02,519 | INFO     | intersect: 28212821328.84774
[2025-07-26 16:47:36] 2025-07-26 20:47:02,519 | INFO     | chi2: 1.4179814437935692
[2025-07-26 16:47:36] 2025-07-26 20:47:02,519 | INFO     | current chi2=1.4179814437935692 (change=1.2861033760058196 %)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,519 | INFO     | left removable region: 20
[2025-07-26 16:47:36] 2025-07-26 20:47:02,520 | INFO     | sum of square deviations: 7879709617.486433
[2025-07-26 16:47:36] 2025-07-26 20:47:02,522 | INFO     | sum of deviations: -96465076749.94897
[2025-07-26 16:47:36] 2025-07-26 20:47:02,523 | INFO     | mean x: 1753553489.5068028
[2025-07-26 16:47:36] 2025-07-26 20:47:02,523 | INFO     | mean y: 2309131.724489796
[2025-07-26 16:47:36] 2025-07-26 20:47:02,523 | INFO     | -- intersect: 21469682951.570187
[2025-07-26 16:47:36] 2025-07-26 20:47:02,523 | INFO     | intersect: 21469682951.570187
[2025-07-26 16:47:36] 2025-07-26 20:47:02,524 | INFO     | chi2: 0.6790813148891826
[2025-07-26 16:47:36] 2025-07-26 20:47:02,524 | INFO     | -- intersect: 21469682951.570187
[2025-07-26 16:47:36] 2025-07-26 20:47:02,524 | INFO     | current memory leak: -12.24 B/s (using 294 data points, chi2=0.68)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | could have reported an average CPU frequency of 2628 MHz (14 samples)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | ..............................
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | . Timing measurements:
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | . get job = 0 s
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | . initial setup = 11 s
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | . payload setup = 7 s
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | . stage-in = 0 s
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | . payload execution = 19478 s
[2025-07-26 16:47:36] 2025-07-26 20:47:02,525 | INFO     | . stage-out = 2 s
[2025-07-26 16:47:36] 2025-07-26 20:47:02,526 | INFO     | . log creation = 0 s
[2025-07-26 16:47:36] 2025-07-26 20:47:02,526 | INFO     | ..............................
[2025-07-26 16:47:36] 2025-07-26 20:47:02,631 | INFO     | 
[2025-07-26 16:47:36] 2025-07-26 20:47:02,631 | INFO     | job summary report
[2025-07-26 16:47:36] 2025-07-26 20:47:02,631 | INFO     | --------------------------------------------------
[2025-07-26 16:47:36] 2025-07-26 20:47:02,631 | INFO     | PanDA job id: 6745102905
[2025-07-26 16:47:36] 2025-07-26 20:47:02,631 | INFO     | task id: 45743349
[2025-07-26 16:47:36] 2025-07-26 20:47:02,631 | INFO     | errors: (none)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,631 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:47:36] 2025-07-26 20:47:02,631 | INFO     | pilot state: finished 
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | transexitcode: 0
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | exeerrorcode: 0
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | exeerrordiag: 
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | exitcode: 0
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | exitmsg: OK
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | cpuconsumptiontime: 57732 s
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | nevents: 400
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | neventsw: 0
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | pid: 2625634
[2025-07-26 16:47:36] 2025-07-26 20:47:02,632 | INFO     | pgrp: 2625634
[2025-07-26 16:47:36] 2025-07-26 20:47:02,633 | INFO     | corecount: 10
[2025-07-26 16:47:36] 2025-07-26 20:47:02,633 | INFO     | event service: False
[2025-07-26 16:47:36] 2025-07-26 20:47:02,633 | INFO     | sizes: {0: 2397361, 1: 2397503, 5: 2397765, 11: 2397821, 19489: 2430853, 19493: 2439851, 19495: 2440035, 19502: 2440229}
[2025-07-26 16:47:36] 2025-07-26 20:47:02,633 | INFO     | --------------------------------------------------
[2025-07-26 16:47:36] 2025-07-26 20:47:02,633 | INFO     | 
[2025-07-26 16:47:36] 2025-07-26 20:47:02,633 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 16:47:36] 2025-07-26 20:47:02,662 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:47:36] 2025-07-26 20:47:02,664 | INFO     | job 6745102905 has completed (purged errors)
[2025-07-26 16:47:36] 2025-07-26 20:47:02,664 | INFO     | overall cleanup function is called
[2025-07-26 16:47:36] 2025-07-26 20:47:03,479 | INFO     | PID=2618818 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 16:47:36] 2025-07-26 20:47:03,479 | INFO     | .. there are 18 such processes running
[2025-07-26 16:47:36] 2025-07-26 20:47:03,673 | INFO     | --- collectZombieJob: --- 10, [2625634]
[2025-07-26 16:47:36] 2025-07-26 20:47:03,673 | INFO     | zombie collector waiting for pid 2625634
[2025-07-26 16:47:36] 2025-07-26 20:47:03,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:47:36] 2025-07-26 20:47:03,674 | INFO     | collected zombie processes
[2025-07-26 16:47:36] 2025-07-26 20:47:03,674 | INFO     | will attempt to kill all subprocesses of pid=2625634
[2025-07-26 16:47:36] 2025-07-26 20:47:03,971 | INFO     | process IDs to be killed: [2625634] (in reverse order)
[2025-07-26 16:47:36] 2025-07-26 20:47:04,069 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:47:36] 2025-07-26 20:47:04,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:47:36] 2025-07-26 20:47:04,080 | INFO     | did not find any defunct processes belonging to 2625634
[2025-07-26 16:47:36] 2025-07-26 20:47:04,091 | INFO     | did not find any defunct processes belonging to 2625634
[2025-07-26 16:47:36] 2025-07-26 20:47:04,091 | INFO     | ready for new job
[2025-07-26 16:47:36] 2025-07-26 20:47:04,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:47:36] 2025-07-26 20:47:04,094 | INFO     | ***************************************
[2025-07-26 16:47:36] 2025-07-26 20:47:04,094 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:47:36] 2025-07-26 20:47:04,094 | INFO     | ***************************************
[2025-07-26 16:47:36] 2025-07-26 20:47:04,094 | INFO     | 
[2025-07-26 16:47:36] 2025-07-26 20:47:04,108 | INFO     | architecture information:
[2025-07-26 16:47:36] 2025-07-26 20:47:04,108 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:47:36] 2025-07-26 20:47:04,124 | INFO     | cat /etc/os-release:
[2025-07-26 16:47:36] NAME="CentOS Linux"
[2025-07-26 16:47:36] VERSION="7 (Core)"
[2025-07-26 16:47:36] ID="centos"
[2025-07-26 16:47:36] ID_LIKE="rhel fedora"
[2025-07-26 16:47:36] VERSION_ID="7"
[2025-07-26 16:47:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:47:36] ANSI_COLOR="0;31"
[2025-07-26 16:47:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:47:36] HOME_URL="https://www.centos.org/"
[2025-07-26 16:47:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:47:36] 
[2025-07-26 16:47:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:47:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:47:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:47:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:47:36] 
[2025-07-26 16:47:36] 2025-07-26 20:47:04,124 | INFO     | ***************************************
[2025-07-26 16:47:36] 2025-07-26 20:47:04,628 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 16:47:36] 2025-07-26 20:47:04,645 | INFO     | sufficient remaining disk space (76704382976 B)
[2025-07-26 16:47:36] 2025-07-26 20:47:04,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:47:36] 2025-07-26 20:47:04,645 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:47:36] 2025-07-26 20:47:04,646 | INFO     | update_server=False
[2025-07-26 16:47:36] 2025-07-26 20:47:04,646 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:47:36] 2025-07-26 20:47:04,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:47:36] 2025-07-26 20:47:04,819 | INFO     | all payload control threads have been joined
[2025-07-26 16:47:36] 2025-07-26 20:47:05,006 | INFO     | all data control threads have been joined
[2025-07-26 16:47:36] 2025-07-26 20:47:05,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:47:36] 2025-07-26 20:47:05,322 | INFO     | aborting loop
[2025-07-26 16:47:36] 2025-07-26 20:47:05,651 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:05,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:47:36] 2025-07-26 20:47:05,825 | INFO     | [payload] control thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:05,840 | INFO     | all job control threads have been joined
[2025-07-26 16:47:36] 2025-07-26 20:47:05,909 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,011 | INFO     | [data] control thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,228 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,312 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,327 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,456 | INFO     | [job] validate thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,597 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,651 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,750 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,846 | INFO     | [job] control thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:06,887 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:07,099 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:07,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:47:36] 2025-07-26 20:47:08,648 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:09,815 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:47:36] 2025-07-26 20:47:11,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857815746368)>', '<ExcThread(monitor, started 139857322030848)>']
[2025-07-26 16:47:36] 2025-07-26 20:47:16,584 | INFO     | all workflow threads have been joined
[2025-07-26 16:47:36] 2025-07-26 20:47:16,585 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:47:36] 2025-07-26 20:47:16,585 | INFO     | traces error code: 0
[2025-07-26 16:47:36] 2025-07-26 20:47:16,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:47:36] 2025-07-26 20:47:35,893 | INFO     | PID=2618818 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 16:47:36] 2025-07-26 20:47:35,893 | INFO     | .. there are 18 such processes running
[2025-07-26 16:47:36] 2025-07-26 20:47:35,895 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:47:36] 2025-07-26 20:47:35,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:47:36] 2025-07-26 20:47:35,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:47:36] 2025-07-26 20:47:35,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:47:36] 2025-07-26 20:47:35,895 | INFO     | [monitor] control thread has ended
[2025-07-26 16:47:36] 2025-07-26 20:47:36,049 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:47:36] 2025-07-26 20:47:36,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:47:36] 2025-07-26 20:47:36,058 [wrapper] pilotpid: 2618818
[2025-07-26 16:47:36] 2025-07-26 20:47:36,063 [wrapper] Pilot exit status: 0
[2025-07-26 16:47:36] 2025-07-26 20:47:36,084 [wrapper] pandaids: 6745102905
[2025-07-26 16:47:36] 2025-07-26 20:47:36,149 [wrapper] cleanup supervisor_pilot 3428837 2618819
[2025-07-26 16:47:36] 2025-07-26 20:47:36,153 [wrapper] Test setup, not cleaning
[2025-07-26 16:47:36] 2025-07-26 20:47:36,158 [wrapper] apfmon messages muted
[2025-07-26 16:47:36] 2025-07-26 20:47:36,165 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:47:36] 2025-07-26 20:47:36,173 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:47:36]  *** Error codes and diagnostics ***
[2025-07-26 16:47:36]     "exeErrorCode": 0,
[2025-07-26 16:47:36]     "exeErrorDiag": "",
[2025-07-26 16:47:36]     "pilotErrorCode": 0,
[2025-07-26 16:47:36]     "pilotErrorDiag": "",
[2025-07-26 16:47:36]  *** Listing of results directory ***
[2025-07-26 16:47:36] total 347412
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 05:28 pilot3.tar.gz
[2025-07-26 16:47:36] -rwx------. 1 boincer umatlas     36292 Jul 26 05:36 runpilot2-wrapper.sh
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 05:36 queuedata.json
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:47:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:21 run_atlas
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:21 job.xml
[2025-07-26 16:47:36] -rw-r--r--. 2 boincer umatlas 143376324 Jul 26 11:21 EVNT.45743347._002029.pool.root.1
[2025-07-26 16:47:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:21 start_atlas.sh
[2025-07-26 16:47:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:21 shared
[2025-07-26 16:47:36] -rw-r--r--. 2 boincer umatlas    542902 Jul 26 11:21 input.tar.gz
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:21 boinc_lockfile
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 11:21 pandaJob.out
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas    980133 Jul 26 11:21 agis_schedconf.cvmfs.json
[2025-07-26 16:47:36] drwx------. 4 boincer umatlas      4096 Jul 26 11:21 pilot3
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas      6658 Jul 26 16:36 init_data.xml
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas 204563611 Jul 26 16:46 HITS.45743349._035648.pool.root.1
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas       531 Jul 26 16:46 boinc_task_state.xml
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas      1041 Jul 26 16:46 memory_monitor_summary.json
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas   1593052 Jul 26 16:46 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas    466171 Jul 26 16:46 log.45743349._035648.job.log.tgz.1
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas      7822 Jul 26 16:47 heartbeat.json
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 16:47 boinc_mmap_file
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas        28 Jul 26 16:47 wrapper_checkpoint.txt
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas        95 Jul 26 16:47 pilot_heartbeat.json
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas       823 Jul 26 16:47 pilotlog.txt
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas   1505797 Jul 26 16:47 log.45743349._035648.job.log.1
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas       357 Jul 26 16:47 output.list
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas       620 Jul 26 16:47 runtime_log
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas   1986560 Jul 26 16:47 result.tar.gz
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas       654 Jul 26 16:47 wPQODm7Uqz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTW0KDmqXkP8m.diag
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas      8648 Jul 26 16:47 runtime_log.err
[2025-07-26 16:47:36] -rw-r--r--. 1 boincer umatlas     21307 Jul 26 16:47 stderr.txt
[2025-07-26 16:47:36] HITS file was successfully produced:
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas 204563611 Jul 26 16:46 shared/HITS.pool.root.1
[2025-07-26 16:47:36]  *** Contents of shared directory: ***
[2025-07-26 16:47:36] total 342280
[2025-07-26 16:47:36] -rw-r--r--. 2 boincer umatlas 143376324 Jul 26 11:21 ATLAS.root_0
[2025-07-26 16:47:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:21 start_atlas.sh
[2025-07-26 16:47:36] -rw-r--r--. 2 boincer umatlas    542902 Jul 26 11:21 input.tar.gz
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas 204563611 Jul 26 16:46 HITS.pool.root.1
[2025-07-26 16:47:36] -rw-------. 1 boincer umatlas   1986560 Jul 26 16:47 result.tar.gz
16:47:58 (2615212): run_atlas exited; CPU time 58240.391358
16:47:58 (2615212): called boinc_finish(0)

</stderr_txt>
]]>

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